| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is cah [H]
Identifier: 13475823
GI number: 13475823
Start: 5755436
End: 5756407
Strand: Direct
Name: cah [H]
Synonym: mlr6993
Alternate gene names: 13475823
Gene position: 5755436-5756407 (Clockwise)
Preceding gene: 13475822
Following gene: 13475828
Centisome position: 81.8
GC content: 60.19
Gene sequence:
>972_bases ATGCCGTTCCCGGATCTGATCCAGCCCGAACTGGGCGCTTATGTCAGCAGTGTCGGCATGCCGGACGACTTTGCCCAATT CTGGACGTCGACCATCGCCGAGGCTCGCCAGGCCGGCGGTGAGGTCAGTATCGTGCAGGCGCAGACGACACTGAAGGCGG TCCAGTCCTTCGATGTCACGTTTCCAGGATACGGCGGTCATCCAATCAAAGGATGGCTGATCTTGCCGACGCACCACAAG GGGCGGCTTCCCCTCGTCGTGCAGTATATCGGCTATGGCGGCGGCCGCGGCTTGGCGCATGAGCAACTGCATTGGGCGGC GTCAGGCTTTGCCTATTTCCGAATGGATACACGCGGGCAGGGAAGCGACTGGAGCGTCGGTGAGACCGCCGATCCCGTCG GCTCGACCTCGTCCATTCCCGGCTTTATGACGCGTGGCGTGCTGGACAAGAATGACTACTATTACCGGCGCCTGTTCACC GATGCCGTGAGGGCGATAGATGCTCTGCTCGGACTGGACTTCGTCGATCCCGAACGCATCGCGGTTTGCGGTGACAGTCA GGGAGGCGGTATTTCGCTCGCCGTTGGCGGCATCGACCCGCGCGTCAAGGCCGTAATGCCCGACGTTCCATTTCTGTGCG ACTTTCCGCGCGCTGTGCAGACTGCCGTGCGCGATCCCTATTTGGAAATCGTTCGCTTTCTGGCCCAGCATCGCGAAAAG AAGGCGGCAGTCTTTGAAACGCTCAACTATTTCGACTGCGTCAACTTCGCCCGGCGGTCCAAGGCGCCGGCGCTGTTTTC GGTGGCCCTGATGGACGAAGTCTGCCCGCCCTCTACCGTGTATGGCGCATTCAATGCCTATGCAGGCGAAAAGACCATCA CAGAGTACGAATTCAACAATCATGAAGGCGGGCAAGGCTATCAAGAGCGCCAACAGATGACGTGGCTCAGCAGGCTGTTC GGTGTCGGCTGA
Upstream 100 bases:
>100_bases TGGCGGGTAACGCGCAGATTGACACCCGCGGGCGGATCCGAATGCGGAGCCATCCATATCAAATCGCCGACTTTGCTTCG AATTAAAATTGGGAGGAACA
Downstream 100 bases:
>100_bases TGTTGGCTGCCCAGCACGTTTCGCGGCATCGCAGGCTCGCGCCGGCCATTTGTATTGAGCGGCGTTGACGTCAGGTGGGT CGTGCCGCTTAAGGAGGCTA
Product: acetyl xylan esterase
Products: NA
Alternate protein names: Acetyl xylan esterase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MPFPDLIQPELGAYVSSVGMPDDFAQFWTSTIAEARQAGGEVSIVQAQTTLKAVQSFDVTFPGYGGHPIKGWLILPTHHK GRLPLVVQYIGYGGGRGLAHEQLHWAASGFAYFRMDTRGQGSDWSVGETADPVGSTSSIPGFMTRGVLDKNDYYYRRLFT DAVRAIDALLGLDFVDPERIAVCGDSQGGGISLAVGGIDPRVKAVMPDVPFLCDFPRAVQTAVRDPYLEIVRFLAQHREK KAAVFETLNYFDCVNFARRSKAPALFSVALMDEVCPPSTVYGAFNAYAGEKTITEYEFNNHEGGQGYQERQQMTWLSRLF GVG
Sequences:
>Translated_323_residues MPFPDLIQPELGAYVSSVGMPDDFAQFWTSTIAEARQAGGEVSIVQAQTTLKAVQSFDVTFPGYGGHPIKGWLILPTHHK GRLPLVVQYIGYGGGRGLAHEQLHWAASGFAYFRMDTRGQGSDWSVGETADPVGSTSSIPGFMTRGVLDKNDYYYRRLFT DAVRAIDALLGLDFVDPERIAVCGDSQGGGISLAVGGIDPRVKAVMPDVPFLCDFPRAVQTAVRDPYLEIVRFLAQHREK KAAVFETLNYFDCVNFARRSKAPALFSVALMDEVCPPSTVYGAFNAYAGEKTITEYEFNNHEGGQGYQERQQMTWLSRLF GVG >Mature_322_residues PFPDLIQPELGAYVSSVGMPDDFAQFWTSTIAEARQAGGEVSIVQAQTTLKAVQSFDVTFPGYGGHPIKGWLILPTHHKG RLPLVVQYIGYGGGRGLAHEQLHWAASGFAYFRMDTRGQGSDWSVGETADPVGSTSSIPGFMTRGVLDKNDYYYRRLFTD AVRAIDALLGLDFVDPERIAVCGDSQGGGISLAVGGIDPRVKAVMPDVPFLCDFPRAVQTAVRDPYLEIVRFLAQHREKK AAVFETLNYFDCVNFARRSKAPALFSVALMDEVCPPSTVYGAFNAYAGEKTITEYEFNNHEGGQGYQERQQMTWLSRLFG VG
Specific function: Esterase that removed acetyl groups from a number of O- acetylated small substrates, such as acetylated xylose, short xylooligosaccharides and cephalosporin C. Has no activity towards polymeric acetylated xylan. Cannot cleave amide linkages [H]
COG id: COG3458
COG function: function code Q; Acetyl esterase (deacetylase)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate esterase 7 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008391 [H]
Pfam domain/function: PF05448 AXE1 [H]
EC number: =3.1.1.41; =3.1.1.72 [H]
Molecular weight: Translated: 35486; Mature: 35355
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPDLIQPELGAYVSSVGMPDDFAQFWTSTIAEARQAGGEVSIVQAQTTLKAVQSFDVT CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCC FPGYGGHPIKGWLILPTHHKGRLPLVVQYIGYGGGRGLAHEQLHWAASGFAYFRMDTRGQ CCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCEEEEEECCCCC GSDWSVGETADPVGSTSSIPGFMTRGVLDKNDYYYRRLFTDAVRAIDALLGLDFVDPERI CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE AVCGDSQGGGISLAVGGIDPRVKAVMPDVPFLCDFPRAVQTAVRDPYLEIVRFLAQHREK EEECCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH KAAVFETLNYFDCVNFARRSKAPALFSVALMDEVCPPSTVYGAFNAYAGEKTITEYEFNN HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCC HEGGQGYQERQQMTWLSRLFGVG CCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFPDLIQPELGAYVSSVGMPDDFAQFWTSTIAEARQAGGEVSIVQAQTTLKAVQSFDVT CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCC FPGYGGHPIKGWLILPTHHKGRLPLVVQYIGYGGGRGLAHEQLHWAASGFAYFRMDTRGQ CCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCEEEEEECCCCC GSDWSVGETADPVGSTSSIPGFMTRGVLDKNDYYYRRLFTDAVRAIDALLGLDFVDPERI CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE AVCGDSQGGGISLAVGGIDPRVKAVMPDVPFLCDFPRAVQTAVRDPYLEIVRFLAQHREK EEECCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH KAAVFETLNYFDCVNFARRSKAPALFSVALMDEVCPPSTVYGAFNAYAGEKTITEYEFNN HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCC HEGGQGYQERQQMTWLSRLFGVG CCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]