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The map label for this gene is ntaR [H]

Identifier: 13475819

GI number: 13475819

Start: 5749615

End: 5750277

Strand: Reverse

Name: ntaR [H]

Synonym: mll6988

Alternate gene names: 13475819

Gene position: 5750277-5749615 (Counterclockwise)

Preceding gene: 13475824

Following gene: 13475818

Centisome position: 81.73

GC content: 63.65

Gene sequence:

>663_bases
ATGCCGACGAACTTTCCAGAGATGTCCGCCACTGCGGAAGTAGAGGCGTACAATCACGTTCAGAGAGCCCTTCGCCTCGG
CCGCTACAAACCGGGCGACAGGCTCATTCCCGAGGAAATTGCCGCCGAGATCGGCATGAGCCGCATGCCGGTGCGGGAAG
CCTTTCGGCGCCTGGCCTCCGACGGGCTGGTGGTCCTTCGTCCTAATCGGGGATGCGTGGTCGCGGGCCTCACTGTCGAT
GAGCTTTTCGAGATTTTCGAGATTCGCTCGGTTCTGGAGGGACTCGCCGTCAGGCTGGCGGTGCCCCGGATCGACGACGA
GGAGTTCGAGGAGCTCGACCGCCTGCTCGAGCGCATGGAGCGTGCGGGCCAGAGCGGCGGCGGCGACTGGGTCGTCCGCC
ACCAGGAATTCCATGGCCGCATCTGTGCGTTGAGCCAGAGGCCCAAGCTGATCCACCAGATATCGGCGCTGCATGTGGTC
ATCGAGCCTTACATGCGCATCTGGTTCGACGATTGTAACAAACCGCTTTCCGCGCGCGAGGAGCATGCCGCCGTAATCGC
TGCCTTGCGCTCGGGCGACGCACATCACGCGGAACAGGTGATGCAGGAACATGTTCTCGGCACGGCGCCGCTGCTGGCCG
AGTTCGTGAGTCCCAGCCGGTGA

Upstream 100 bases:

>100_bases
ATCGGATCTCCGGGCCGCTGCGGTGCGTCACGGGGTATTGACGATGCATCAAAATGCGGCTTTGATGATACGTGGATACA
AAAATACTTTTTGAGGTCCC

Downstream 100 bases:

>100_bases
CGAAAGCCGGCCGGGCAGGAGTGGCCTCGAACCGGCAATGCGGCCGGGCGCGGGAAGAGTTCAATCAGCCTATCAAAAAA
AGGGGAACCAAATGAAATTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPTNFPEMSATAEVEAYNHVQRALRLGRYKPGDRLIPEEIAAEIGMSRMPVREAFRRLASDGLVVLRPNRGCVVAGLTVD
ELFEIFEIRSVLEGLAVRLAVPRIDDEEFEELDRLLERMERAGQSGGGDWVVRHQEFHGRICALSQRPKLIHQISALHVV
IEPYMRIWFDDCNKPLSAREEHAAVIAALRSGDAHHAEQVMQEHVLGTAPLLAEFVSPSR

Sequences:

>Translated_220_residues
MPTNFPEMSATAEVEAYNHVQRALRLGRYKPGDRLIPEEIAAEIGMSRMPVREAFRRLASDGLVVLRPNRGCVVAGLTVD
ELFEIFEIRSVLEGLAVRLAVPRIDDEEFEELDRLLERMERAGQSGGGDWVVRHQEFHGRICALSQRPKLIHQISALHVV
IEPYMRIWFDDCNKPLSAREEHAAVIAALRSGDAHHAEQVMQEHVLGTAPLLAEFVSPSR
>Mature_219_residues
PTNFPEMSATAEVEAYNHVQRALRLGRYKPGDRLIPEEIAAEIGMSRMPVREAFRRLASDGLVVLRPNRGCVVAGLTVDE
LFEIFEIRSVLEGLAVRLAVPRIDDEEFEELDRLLERMERAGQSGGGDWVVRHQEFHGRICALSQRPKLIHQISALHVVI
EPYMRIWFDDCNKPLSAREEHAAVIAALRSGDAHHAEQVMQEHVLGTAPLLAEFVSPSR

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081914, Length=206, Percent_Identity=32.0388349514563, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI87082149, Length=216, Percent_Identity=26.3888888888889, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787821, Length=176, Percent_Identity=25.5681818181818, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 24792; Mature: 24661

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTNFPEMSATAEVEAYNHVQRALRLGRYKPGDRLIPEEIAAEIGMSRMPVREAFRRLAS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
DGLVVLRPNRGCVVAGLTVDELFEIFEIRSVLEGLAVRLAVPRIDDEEFEELDRLLERME
CCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RAGQSGGGDWVVRHQEFHGRICALSQRPKLIHQISALHVVIEPYMRIWFDDCNKPLSARE
HCCCCCCCCEEEECHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EHAAVIAALRSGDAHHAEQVMQEHVLGTAPLLAEFVSPSR
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PTNFPEMSATAEVEAYNHVQRALRLGRYKPGDRLIPEEIAAEIGMSRMPVREAFRRLAS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
DGLVVLRPNRGCVVAGLTVDELFEIFEIRSVLEGLAVRLAVPRIDDEEFEELDRLLERME
CCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RAGQSGGGDWVVRHQEFHGRICALSQRPKLIHQISALHVVIEPYMRIWFDDCNKPLSARE
HCCCCCCCCEEEECHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EHAAVIAALRSGDAHHAEQVMQEHVLGTAPLLAEFVSPSR
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA