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The map label for this gene is occT [H]

Identifier: 13475818

GI number: 13475818

Start: 5748672

End: 5749523

Strand: Reverse

Name: occT [H]

Synonym: mll6987

Alternate gene names: 13475818

Gene position: 5749523-5748672 (Counterclockwise)

Preceding gene: 13475819

Following gene: 13475817

Centisome position: 81.71

GC content: 57.75

Gene sequence:

>852_bases
ATGAAATTCAATCGTTTGGCCGTAGCCGCGGCCGCACTCAGCATGTTCGGCTTCATGCACACAGCGTTTGCCGAAGATGC
GCCCAAGTCCATAACCATCGCCACTGAGGGCGCCTACGCTCCGTGGAACTTCACCAACGCGGACGGCAAGCTCGACGGAC
TGGAGATCGAGCTCGCTAACAATCTTTGCGAACGGATGAAGGTCAAATGCACCATCATCGCTCAGGACTGGGACGGTCTT
ATTCCGTCGCTGAAGGTCGGCAAGTTCGATGTGATCATGGCCGGCATGTTCATCACTCCGAAGCGGCTCGAAACCATAGA
TTTCACCCAGCCTTATGCGGTCGATCCAGGTGGATTCGCCGTTGCCAAGGACAGCGAGCTTGGCAAGCTCGGTGTTTCCG
CGGAGAAGTTCAATCTGGACGACGAGGCTGCTTCCAAGGCCGCGATCGAGAAATTGAAGCCGCTGCTGAAAGGCAAGGTG
GTCGGCGTCCAGGCGGCCACGATGATGCTCGATTTCGTCAAGAAGTACTTCGGCGACACGGTGGAAATCCGCGAGTACAA
GACCACCGAACAACATGATCTCGACCTCGCCGCCGGCCGCGTCGACGCTCTTTTCGCGCAGCGGACGGCGCTCGCCGCGA
CACTCTCAAAACCTGAATTTGCCCATTACACCCTTGCCGGACCGGGCTTTGTGGGCGGCCTTTTCGGTCGTGGAACCGGT
GCGGGGCTGCGCAAGGAAGACACTAAGCTCAAGGAGATGCTGAATGCGGCAATCGACGGAGCTATAGCCGACGGCACCAT
CAAGCGTATCTCGGAGAAATGGGTGAAAACCGATGTGACGCCGATGAAGTAG

Upstream 100 bases:

>100_bases
AGCCGGTGACGAAAGCCGGCCGGGCAGGAGTGGCCTCGAACCGGCAATGCGGCCGGGCGCGGGAAGAGTTCAATCAGCCT
ATCAAAAAAAGGGGAACCAA

Downstream 100 bases:

>100_bases
GTGCGGGCGAACCTGCCCGGCGCGGCGGAGCGAGCCGTCCGCGTCGGGCAGCGCGCTGAAAGGCTATGACTTACATGACC
AATATTATGCATATTTTGGG

Product: ABC transporter, periplasmic binding-protein

Products: ADP; phosphate; L-histidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKFNRLAVAAAALSMFGFMHTAFAEDAPKSITIATEGAYAPWNFTNADGKLDGLEIELANNLCERMKVKCTIIAQDWDGL
IPSLKVGKFDVIMAGMFITPKRLETIDFTQPYAVDPGGFAVAKDSELGKLGVSAEKFNLDDEAASKAAIEKLKPLLKGKV
VGVQAATMMLDFVKKYFGDTVEIREYKTTEQHDLDLAAGRVDALFAQRTALAATLSKPEFAHYTLAGPGFVGGLFGRGTG
AGLRKEDTKLKEMLNAAIDGAIADGTIKRISEKWVKTDVTPMK

Sequences:

>Translated_283_residues
MKFNRLAVAAAALSMFGFMHTAFAEDAPKSITIATEGAYAPWNFTNADGKLDGLEIELANNLCERMKVKCTIIAQDWDGL
IPSLKVGKFDVIMAGMFITPKRLETIDFTQPYAVDPGGFAVAKDSELGKLGVSAEKFNLDDEAASKAAIEKLKPLLKGKV
VGVQAATMMLDFVKKYFGDTVEIREYKTTEQHDLDLAAGRVDALFAQRTALAATLSKPEFAHYTLAGPGFVGGLFGRGTG
AGLRKEDTKLKEMLNAAIDGAIADGTIKRISEKWVKTDVTPMK
>Mature_283_residues
MKFNRLAVAAAALSMFGFMHTAFAEDAPKSITIATEGAYAPWNFTNADGKLDGLEIELANNLCERMKVKCTIIAQDWDGL
IPSLKVGKFDVIMAGMFITPKRLETIDFTQPYAVDPGGFAVAKDSELGKLGVSAEKFNLDDEAASKAAIEKLKPLLKGKV
VGVQAATMMLDFVKKYFGDTVEIREYKTTEQHDLDLAAGRVDALFAQRTALAATLSKPEFAHYTLAGPGFVGGLFGRGTG
AGLRKEDTKLKEMLNAAIDGAIADGTIKRISEKWVKTDVTPMK

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788648, Length=256, Percent_Identity=37.109375, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1788649, Length=273, Percent_Identity=33.6996336996337, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787088, Length=251, Percent_Identity=30.6772908366534, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787085, Length=270, Percent_Identity=28.5185185185185, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788228, Length=252, Percent_Identity=30.952380952381, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787031, Length=273, Percent_Identity=24.1758241758242, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 3400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30594; Mature: 30594

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNRLAVAAAALSMFGFMHTAFAEDAPKSITIATEGAYAPWNFTNADGKLDGLEIELAN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHH
NLCERMKVKCTIIAQDWDGLIPSLKVGKFDVIMAGMFITPKRLETIDFTQPYAVDPGGFA
HHHHHCEEEEEEEEECCCCCCCCCCCCCEEEEEECEEECCCCCCEECCCCCEEECCCCEE
VAKDSELGKLGVSAEKFNLDDEAASKAAIEKLKPLLKGKVVGVQAATMMLDFVKKYFGDT
EECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCE
VEIREYKTTEQHDLDLAAGRVDALFAQRTALAATLSKPEFAHYTLAGPGFVGGLFGRGTG
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCC
AGLRKEDTKLKEMLNAAIDGAIADGTIKRISEKWVKTDVTPMK
CCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKFNRLAVAAAALSMFGFMHTAFAEDAPKSITIATEGAYAPWNFTNADGKLDGLEIELAN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHHH
NLCERMKVKCTIIAQDWDGLIPSLKVGKFDVIMAGMFITPKRLETIDFTQPYAVDPGGFA
HHHHHCEEEEEEEEECCCCCCCCCCCCCEEEEEECEEECCCCCCEECCCCCEEECCCCEE
VAKDSELGKLGVSAEKFNLDDEAASKAAIEKLKPLLKGKVVGVQAATMMLDFVKKYFGDT
EECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCE
VEIREYKTTEQHDLDLAAGRVDALFAQRTALAATLSKPEFAHYTLAGPGFVGGLFGRGTG
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCC
AGLRKEDTKLKEMLNAAIDGAIADGTIKRISEKWVKTDVTPMK
CCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA