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The map label for this gene is occQ [H]

Identifier: 13475817

GI number: 13475817

Start: 5747884

End: 5748585

Strand: Reverse

Name: occQ [H]

Synonym: mll6986

Alternate gene names: 13475817

Gene position: 5748585-5747884 (Counterclockwise)

Preceding gene: 13475818

Following gene: 13475816

Centisome position: 81.7

GC content: 62.25

Gene sequence:

>702_bases
ATGCATATTTTGGGTTTTCAGCAGGGCGGCTGGGGAGCAGCTCTGCTCGCCGCATCCAGTGTTACGCTTGCACTGTCCGT
TCTCGGCTTTATCCTCGGTGCGGCCCTCGGCGCCACGGCCGCGGCCGGTCGCCTGTCTTCCCGCCGCGTCCCTGCCTGGC
TCGCCCATGTCTACGGCACTGTATTTCGCGGTGTGCCAGACTTGCTGACGATCTACCTCCTCTACTATGGCGGCAGCATC
GCCCTGACGCAGATCGGCACATTGTTTGGCAGCGATGGCTTCGTCGGGCTGCCGACGTTTGCAACCGGTGTCCTGGCGAT
CGGCATCATATCGGGGGCTTATCAGGGGGAAGTCTATCGCGGCGCCTACCAGGCCGTGGATCGCGGCCAGTTCGAGGCTT
GCAAGGCGCTTGGCCTGTCTCGATATCAATCGTTGCGCCTTGTCATCGTGCCGCAACTGATGCGCCACGCGCTGCCGGGC
CTCGGCAATGTCTGGCAGTTGGTGCTGAAGGACTCGGCGCTGATCTCCGTCATTGGCCTCGTCGAACTGATGCGCCAGGC
GCAGATCGGAGCGGGTTCGACACGAGAACCTTTCATCTTCTATGTTGCCGCTGCCGCGCTCTACTTCGTCATCGCCGTCG
TGACCGCTTCCGTCTTCCGTTTTAGTGAGGCACGGGCCTGGAGAGGCATGGTTCACGCGTGA

Upstream 100 bases:

>100_bases
CGCCGATGAAGTAGGTGCGGGCGAACCTGCCCGGCGCGGCGGAGCGAGCCGTCCGCGTCGGGCAGCGCGCTGAAAGGCTA
TGACTTACATGACCAATATT

Downstream 100 bases:

>100_bases
TCGACTTCGCCTTCTTTCTCGAGATCATTCCCGTCCTGCTTGCTGGCCTGCCATTGACACTGCTGCTTACAACAGCCTCG
ATGGTCATCGGCTTCTTTTT

Product: ABC transporter, permease protein

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MHILGFQQGGWGAALLAASSVTLALSVLGFILGAALGATAAAGRLSSRRVPAWLAHVYGTVFRGVPDLLTIYLLYYGGSI
ALTQIGTLFGSDGFVGLPTFATGVLAIGIISGAYQGEVYRGAYQAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPG
LGNVWQLVLKDSALISVIGLVELMRQAQIGAGSTREPFIFYVAAAALYFVIAVVTASVFRFSEARAWRGMVHA

Sequences:

>Translated_233_residues
MHILGFQQGGWGAALLAASSVTLALSVLGFILGAALGATAAAGRLSSRRVPAWLAHVYGTVFRGVPDLLTIYLLYYGGSI
ALTQIGTLFGSDGFVGLPTFATGVLAIGIISGAYQGEVYRGAYQAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPG
LGNVWQLVLKDSALISVIGLVELMRQAQIGAGSTREPFIFYVAAAALYFVIAVVTASVFRFSEARAWRGMVHA
>Mature_233_residues
MHILGFQQGGWGAALLAASSVTLALSVLGFILGAALGATAAAGRLSSRRVPAWLAHVYGTVFRGVPDLLTIYLLYYGGSI
ALTQIGTLFGSDGFVGLPTFATGVLAIGIISGAYQGEVYRGAYQAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPG
LGNVWQLVLKDSALISVIGLVELMRQAQIGAGSTREPFIFYVAAAALYFVIAVVTASVFRFSEARAWRGMVHA

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788646, Length=224, Percent_Identity=37.0535714285714, Blast_Score=156, Evalue=9e-40,
Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=36.7256637168142, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=34.3137254901961, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=35.377358490566, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=34.1232227488152, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786873, Length=196, Percent_Identity=30.1020408163265, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787086, Length=179, Percent_Identity=30.7262569832402, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87082239, Length=212, Percent_Identity=27.3584905660377, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1786874, Length=169, Percent_Identity=29.585798816568, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI48994930, Length=92, Percent_Identity=35.8695652173913, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24654; Mature: 24654

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILGFQQGGWGAALLAASSVTLALSVLGFILGAALGATAAAGRLSSRRVPAWLAHVYGT
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VFRGVPDLLTIYLLYYGGSIALTQIGTLFGSDGFVGLPTFATGVLAIGIISGAYQGEVYR
HHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHCCCCCHHHH
GAYQAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VELMRQAQIGAGSTREPFIFYVAAAALYFVIAVVTASVFRFSEARAWRGMVHA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHILGFQQGGWGAALLAASSVTLALSVLGFILGAALGATAAAGRLSSRRVPAWLAHVYGT
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VFRGVPDLLTIYLLYYGGSIALTQIGTLFGSDGFVGLPTFATGVLAIGIISGAYQGEVYR
HHHCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHCCCCCHHHH
GAYQAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VELMRQAQIGAGSTREPFIFYVAAAALYFVIAVVTASVFRFSEARAWRGMVHA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA