| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is paaF [C]
Identifier: 13475805
GI number: 13475805
Start: 5736888
End: 5737694
Strand: Direct
Name: paaF [C]
Synonym: mlr6976
Alternate gene names: 13475805
Gene position: 5736888-5737694 (Clockwise)
Preceding gene: 13475804
Following gene: 13475811
Centisome position: 81.54
GC content: 60.47
Gene sequence:
>807_bases ATGGCCATCCAAATCGACATCACCCGATACGAGAACCTTGCCGTCGAGGCTCATGACGAGGGGGTTTGGGTCGTAACCCT GAACCGTCCCACCAAACGCAATGCGCTGGATGCAAATACGATCGAAGAACTGGTCGACTTTTTTTCCACCGCTCCTCGCG CGGGTGTCCGCGCGATTGTGTTGGCCGGGTCGGGTGACCATTTTTGCGCCGGACTAGACTTGATTGAGCATCATCAAGCT GACCGCAGCCCGGCGGATTTCATGCATATTTGCCTGCGCTGGCACGAGGCCTTCAACAAGATGGAATATGGCGGCGTGCC GATCATCGCAGCCCTGCAGGGTGCGGTTGTGGGCGGTGGGCTGGAGCTGGCCAGCGCCGCCCATATCCGGGTAATGGACA AGACGACCTATTTTGCGCTGCCTGAAGGCCAACGTGGACTTTTCACGGGCGGCGGCGCCACGATCCGCGTCACCGATCTG GTGGGCAAGTCGCGCACGATCGACATGATGCTGACGGGCCGGGTGTATCAGGGACAAGAAGCGGTCGATCTGGGGCTCGC GCAGTACATCGTCGAAGGATCAAGTTTCGAGAAGGCCCTGGAACTCGCCCACAAAACAGCGCAGAACCTGCCCCTGTCCA ACTTTGCGATCTGTTCCGCTGTGAGCCACATGCAGAATATGTCCGCGCTGGATGCCGCTTATGCCGAGGCTGTCGTCGCC GGTGTGGTGAACACTCAGCCCGAGGCCCGGGCTCGACTCGCCGCTTTCGCCGACAAGAGCGCGGCACGGGTGCGGGCCAA CTATTGA
Upstream 100 bases:
>100_bases CTTCAGCGAGCCCGGGTCATGGACGGCGCCGCAAGCCTGTTGGACATCGAATTCTGAATAGAACAATCAACCCTCTTCAA CTCGGGAACAGGACCGTACC
Downstream 100 bases:
>100_bases GACTGATTCCAGAATTTGTCCCTGGCGGAATTGTGATTTGTAGAGTCGGCAGCGACAGCGCCGCCCAACTCCAGCCATTT GCGAAAACCGTCGATGCGGA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAIQIDITRYENLAVEAHDEGVWVVTLNRPTKRNALDANTIEELVDFFSTAPRAGVRAIVLAGSGDHFCAGLDLIEHHQA DRSPADFMHICLRWHEAFNKMEYGGVPIIAALQGAVVGGGLELASAAHIRVMDKTTYFALPEGQRGLFTGGGATIRVTDL VGKSRTIDMMLTGRVYQGQEAVDLGLAQYIVEGSSFEKALELAHKTAQNLPLSNFAICSAVSHMQNMSALDAAYAEAVVA GVVNTQPEARARLAAFADKSAARVRANY
Sequences:
>Translated_268_residues MAIQIDITRYENLAVEAHDEGVWVVTLNRPTKRNALDANTIEELVDFFSTAPRAGVRAIVLAGSGDHFCAGLDLIEHHQA DRSPADFMHICLRWHEAFNKMEYGGVPIIAALQGAVVGGGLELASAAHIRVMDKTTYFALPEGQRGLFTGGGATIRVTDL VGKSRTIDMMLTGRVYQGQEAVDLGLAQYIVEGSSFEKALELAHKTAQNLPLSNFAICSAVSHMQNMSALDAAYAEAVVA GVVNTQPEARARLAAFADKSAARVRANY >Mature_267_residues AIQIDITRYENLAVEAHDEGVWVVTLNRPTKRNALDANTIEELVDFFSTAPRAGVRAIVLAGSGDHFCAGLDLIEHHQAD RSPADFMHICLRWHEAFNKMEYGGVPIIAALQGAVVGGGLELASAAHIRVMDKTTYFALPEGQRGLFTGGGATIRVTDLV GKSRTIDMMLTGRVYQGQEAVDLGLAQYIVEGSSFEKALELAHKTAQNLPLSNFAICSAVSHMQNMSALDAAYAEAVVAG VVNTQPEARARLAAFADKSAARVRANY
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=192, Percent_Identity=31.7708333333333, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI194097323, Length=192, Percent_Identity=34.375, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI68989263, Length=184, Percent_Identity=28.804347826087, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI20127408, Length=176, Percent_Identity=30.6818181818182, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI4757968, Length=190, Percent_Identity=23.1578947368421, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI49355787, Length=190, Percent_Identity=23.1578947368421, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI157694516, Length=258, Percent_Identity=22.093023255814, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI213417737, Length=255, Percent_Identity=22.3529411764706, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4502327, Length=261, Percent_Identity=29.1187739463602, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4757966, Length=190, Percent_Identity=22.6315789473684, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI51538581, Length=190, Percent_Identity=22.6315789473684, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI25453481, Length=190, Percent_Identity=22.6315789473684, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI51538573, Length=190, Percent_Identity=22.6315789473684, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1787659, Length=226, Percent_Identity=32.7433628318584, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI221142681, Length=197, Percent_Identity=32.48730964467, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1788682, Length=113, Percent_Identity=43.3628318584071, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788597, Length=209, Percent_Identity=23.9234449760766, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790281, Length=235, Percent_Identity=21.7021276595745, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17540714, Length=200, Percent_Identity=32.5, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17560910, Length=189, Percent_Identity=32.8042328042328, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17558304, Length=155, Percent_Identity=32.258064516129, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17534483, Length=220, Percent_Identity=28.6363636363636, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17536985, Length=226, Percent_Identity=26.5486725663717, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17508951, Length=193, Percent_Identity=31.6062176165803, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25144276, Length=193, Percent_Identity=31.6062176165803, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17508953, Length=193, Percent_Identity=31.6062176165803, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25145438, Length=258, Percent_Identity=29.0697674418605, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17554946, Length=197, Percent_Identity=30.9644670050761, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24653139, Length=248, Percent_Identity=30.241935483871, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI21357171, Length=201, Percent_Identity=32.8358208955224, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI20129971, Length=185, Percent_Identity=36.7567567567568, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24653477, Length=185, Percent_Identity=36.7567567567568, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24650670, Length=204, Percent_Identity=32.843137254902, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI19920382, Length=220, Percent_Identity=29.0909090909091, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI19921000, Length=199, Percent_Identity=32.6633165829146, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24583077, Length=199, Percent_Identity=32.6633165829146, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24583079, Length=199, Percent_Identity=32.6633165829146, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI28571729, Length=203, Percent_Identity=28.0788177339901, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28571730, Length=203, Percent_Identity=28.0788177339901, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28842; Mature: 28711
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQIDITRYENLAVEAHDEGVWVVTLNRPTKRNALDANTIEELVDFFSTAPRAGVRAIV CEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE LAGSGDHFCAGLDLIEHHQADRSPADFMHICLRWHEAFNKMEYGGVPIIAALQGAVVGGG EECCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCC LELASAAHIRVMDKTTYFALPEGQRGLFTGGGATIRVTDLVGKSRTIDMMLTGRVYQGQE HHHCCCEEEEEEECCEEEECCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCEECCCH AVDLGLAQYIVEGSSFEKALELAHKTAQNLPLSNFAICSAVSHMQNMSALDAAYAEAVVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVNTQPEARARLAAFADKSAARVRANY HHHCCCHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure AIQIDITRYENLAVEAHDEGVWVVTLNRPTKRNALDANTIEELVDFFSTAPRAGVRAIV EEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE LAGSGDHFCAGLDLIEHHQADRSPADFMHICLRWHEAFNKMEYGGVPIIAALQGAVVGGG EECCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCC LELASAAHIRVMDKTTYFALPEGQRGLFTGGGATIRVTDLVGKSRTIDMMLTGRVYQGQE HHHCCCEEEEEEECCEEEECCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCEECCCH AVDLGLAQYIVEGSSFEKALELAHKTAQNLPLSNFAICSAVSHMQNMSALDAAYAEAVVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVNTQPEARARLAAFADKSAARVRANY HHHCCCHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA