Click here to switch to the map view.

The map label for this gene is gcvT [H]

Identifier: 13475801

GI number: 13475801

Start: 5732340

End: 5733080

Strand: Direct

Name: gcvT [H]

Synonym: mlr6972

Alternate gene names: 13475801

Gene position: 5732340-5733080 (Clockwise)

Preceding gene: 13475798

Following gene: 13475802

Centisome position: 81.47

GC content: 58.7

Gene sequence:

>741_bases
ATGTTTTCAGTTTTCCCAACGGCGCGATTGCGGCCGTCACCGTTTTATGCCTCGGCCGTCGCTGAAGGTATGACCGCGGC
CAGCATCTATAACCGGATGATCATGCCCACGTCTTATGGTGATCCCGAGGCGGAATACTGGCGACTGATCAACGGCGTCT
CTCAATGGGATGTCGGCGTGGAGCGCCAGGTGCAACTGAAAGGGCCGGATGCGGGCCGCCTGGCGCAGATCCTGTCACCG
CGCGATCTGTCCAACTGCAAAGTCGGTCAGGGCAAATATGTGCCGCTATGCAACCATAGAGGCACGATCATCAATGATCC
GATTCTGCTGAAGCTGGCGGATGACCTTTATTGGCTATCGATTGCCGATAGCGACATCTGGTTTTGGGCCAGCGCTATTG
CTGCCGAACGCGGCATGACCGTCGAGGTCAGCGAGCCTGACGTCTCCCCCATGGCGCTGCAAGGGCCAAAAGCCGAGGAT
GTCGTGGCCCATGTATTGGGCGATTGGGTTCGACAGCTGAAGTATTTCTGGTTCAAGGAAACCGAAATCGAAGGCATTCC
GGTGGCCGTTCAGCGCTCTGGGTGGTCCAAGCAAGGCGGGTTCGAAATCTATCTGAAAGACGGGACTCGCGGCACTCAGC
TTTGGAATATTTTCAAGGAGGCGGGCCAGCCCTGGGGCATTGGCCCAGGCGCTCCTGCCACGGCGGAGCGCACCGAAAGC
GGCCTTGTCGGTCGGCGGTGA

Upstream 100 bases:

>100_bases
ACACAGCCATAACTTTTTGTATAGGTATGCCCCCCTAATACGTCCTTTGACGAAACCGCGCCAGCCTGATCATTGGGTGT
CGACCATAGGGGAGGGGCCG

Downstream 100 bases:

>100_bases
TACCGACGACGCGACCAATCCGTTCGAGGTGCGTCTGGGCAAGTACGTTGATCTTCATGTCGCCGATGACGTCGTGGGCA
TCCAAGCGCTGCGCCGGATC

Product: aminomethyltransferase

Products: NA

Alternate protein names: Glycine cleavage system T protein [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MFSVFPTARLRPSPFYASAVAEGMTAASIYNRMIMPTSYGDPEAEYWRLINGVSQWDVGVERQVQLKGPDAGRLAQILSP
RDLSNCKVGQGKYVPLCNHRGTIINDPILLKLADDLYWLSIADSDIWFWASAIAAERGMTVEVSEPDVSPMALQGPKAED
VVAHVLGDWVRQLKYFWFKETEIEGIPVAVQRSGWSKQGGFEIYLKDGTRGTQLWNIFKEAGQPWGIGPGAPATAERTES
GLVGRR

Sequences:

>Translated_246_residues
MFSVFPTARLRPSPFYASAVAEGMTAASIYNRMIMPTSYGDPEAEYWRLINGVSQWDVGVERQVQLKGPDAGRLAQILSP
RDLSNCKVGQGKYVPLCNHRGTIINDPILLKLADDLYWLSIADSDIWFWASAIAAERGMTVEVSEPDVSPMALQGPKAED
VVAHVLGDWVRQLKYFWFKETEIEGIPVAVQRSGWSKQGGFEIYLKDGTRGTQLWNIFKEAGQPWGIGPGAPATAERTES
GLVGRR
>Mature_246_residues
MFSVFPTARLRPSPFYASAVAEGMTAASIYNRMIMPTSYGDPEAEYWRLINGVSQWDVGVERQVQLKGPDAGRLAQILSP
RDLSNCKVGQGKYVPLCNHRGTIINDPILLKLADDLYWLSIADSDIWFWASAIAAERGMTVEVSEPDVSPMALQGPKAED
VVAHVLGDWVRQLKYFWFKETEIEGIPVAVQRSGWSKQGGFEIYLKDGTRGTQLWNIFKEAGQPWGIGPGAPATAERTES
GLVGRR

Specific function: The glycine cleavage system catalyzes the degradation of glycine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcvT family [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013977
- InterPro:   IPR006222
- InterPro:   IPR006223
- InterPro:   IPR022903 [H]

Pfam domain/function: PF01571 GCV_T; PF08669 GCV_T_C [H]

EC number: =2.1.2.10 [H]

Molecular weight: Translated: 27263; Mature: 27263

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVFPTARLRPSPFYASAVAEGMTAASIYNRMIMPTSYGDPEAEYWRLINGVSQWDVGV
CCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHCCCCC
ERQVQLKGPDAGRLAQILSPRDLSNCKVGQGKYVPLCNHRGTIINDPILLKLADDLYWLS
CEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEECCCEEEEEECCEEEEE
IADSDIWFWASAIAAERGMTVEVSEPDVSPMALQGPKAEDVVAHVLGDWVRQLKYFWFKE
EECCCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
TEIEGIPVAVQRSGWSKQGGFEIYLKDGTRGTQLWNIFKEAGQPWGIGPGAPATAERTES
CCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC
GLVGRR
CCCCCC
>Mature Secondary Structure
MFSVFPTARLRPSPFYASAVAEGMTAASIYNRMIMPTSYGDPEAEYWRLINGVSQWDVGV
CCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHCCCCC
ERQVQLKGPDAGRLAQILSPRDLSNCKVGQGKYVPLCNHRGTIINDPILLKLADDLYWLS
CEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEECCCEEEEEECCEEEEE
IADSDIWFWASAIAAERGMTVEVSEPDVSPMALQGPKAEDVVAHVLGDWVRQLKYFWFKE
EECCCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
TEIEGIPVAVQRSGWSKQGGFEIYLKDGTRGTQLWNIFKEAGQPWGIGPGAPATAERTES
CCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC
GLVGRR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]