Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475790

Identifier: 13475790

GI number: 13475790

Start: 5718122

End: 5719078

Strand: Reverse

Name: 13475790

Synonym: mll6957

Alternate gene names: NA

Gene position: 5719078-5718122 (Counterclockwise)

Preceding gene: 13475799

Following gene: 13475787

Centisome position: 81.28

GC content: 63.01

Gene sequence:

>957_bases
ATGACACGCGTAGTGATCATCGGCGGCAGCGGGCATGTCGGCACGTACCTAGTGCCGCGGCTGGTCGAGGCCGGATATGA
AGTGGTCAATGTCAGCCGCGGCCAGCGCGCAGCCTATACGCTGAATGCGGCGTGGAAATCGGTCGAGCCCGTAGTGATCG
ACCGCGACACGGAGGAGAAGGCTGGCACATTCGGCGAGAAGGTCCGCGCGCTGAAGGCCGATATCGTGGTGGACATGATT
TCCTTCACCCTCGACAGCACCAAGCAGATCGTTGGTGCGCTGCGAGGCGAGGTGCAGCACTTCCTCCATTGCGGCACCAT
CTGGGTCTATGGGCACAATACCGCAATCCCCGCGACAGAGGACCAGCCGAAGAATCCGTTCGGCAGCTATGGCACGCAAA
AGGCCGAGATCGAGAGCTGGCTGCTCAACGAAGCCAGGCGGAACGGTTTTCCAGCCACGGTGTTTCGTCCCGGCCATATC
GTGGGGCCTGGCTGGGAGCCGCTCAATCCGGCGGGGCACTTCGACGTCGGTGTGTTCTCCCAGATCGCCCGTGGCGAGCC
GCTGGTGCTGCCCAATCTTGGCAACGAGACAGTGCACCACGTGCATGCCGACGACGTAGCACAGATGGTGATGCGCGCCA
TTGTGAGTTGGAGCAACGCGGTGGGCGAGGCCTTCAACACCGTCTCGCCTCAGGCGATCAATCTGCGCGGCTACGCCGAG
GCCCTGTACAACTGGTTCGGCCACGCCCCGCGGCTGAGCTACGAGCCGTTCGATACGTGGAAGGGCAAGCAGACCGAAGA
AAATTGGCGCGCCACCTGGGAGCACATTGCACGCAGCCCGAGCCATTCGATCGCCAAGGCGCGGAACCTCCTGGGCTACG
ACCCGCGGTATTCGTCGCTCCAGGCAGTGTATGAGTCCGTCGAGTGGCTGGTGGCGAACGGGAAACTCAGCCGGTAG

Upstream 100 bases:

>100_bases
TCTGTGCGCATCGGCAGGTCTGGGCGTTGACCCGCGGCGGAATCGAGTGGCGTTCGCCAACTCCCAGTGGCACAATCCGC
CAGCAATCGGCGAGGCGAAA

Downstream 100 bases:

>100_bases
GAGTGCCCAGATACTTCTCAGCCTCGGCGCAGGTCGAAACCCGCATTGCGTCTATCAAATTAGAATGCGGGTTTTTCTCG
CCAAGCGTAACTTGAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Nucleotide Sugar Epimerase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family Protein; Oxidoreductase Gfo/Idh/MocA Family; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Isoflavone Reductase; Oxidoreductase Domain Protein; Nucleotide Sugar Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; NDP-Glucose 4 6-Dehydratase; Lipoprotein

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEKAGTFGEKVRALKADIVVDMI
SFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHI
VGPGWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE
ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSLQAVYESVEWLVANGKLSR

Sequences:

>Translated_318_residues
MTRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEKAGTFGEKVRALKADIVVDMI
SFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHI
VGPGWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE
ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSLQAVYESVEWLVANGKLSR
>Mature_317_residues
TRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEKAGTFGEKVRALKADIVVDMIS
FTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATEDQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIV
GPGWEPLNPAGHFDVGVFSQIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAEA
LYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSLQAVYESVEWLVANGKLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35230; Mature: 35099

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEK
CCEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEHHHCCCCCEEEECCCHHH
AGTFGEKVRALKADIVVDMISFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC
DQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIVGPGWEPLNPAGHFDVGVFS
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCHHHHH
QIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE
HHHCCCCEEECCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSL
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH
QAVYESVEWLVANGKLSR
HHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
TRVVIIGGSGHVGTYLVPRLVEAGYEVVNVSRGQRAAYTLNAAWKSVEPVVIDRDTEEK
CEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEHHHCCCCCEEEECCCHHH
AGTFGEKVRALKADIVVDMISFTLDSTKQIVGALRGEVQHFLHCGTIWVYGHNTAIPATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC
DQPKNPFGSYGTQKAEIESWLLNEARRNGFPATVFRPGHIVGPGWEPLNPAGHFDVGVFS
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCHHHHH
QIARGEPLVLPNLGNETVHHVHADDVAQMVMRAIVSWSNAVGEAFNTVSPQAINLRGYAE
HHHCCCCEEECCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH
ALYNWFGHAPRLSYEPFDTWKGKQTEENWRATWEHIARSPSHSIAKARNLLGYDPRYSSL
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH
QAVYESVEWLVANGKLSR
HHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA