| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475756
Identifier: 13475756
GI number: 13475756
Start: 5685380
End: 5686702
Strand: Direct
Name: 13475756
Synonym: mlr6914
Alternate gene names: NA
Gene position: 5685380-5686702 (Clockwise)
Preceding gene: 13475752
Following gene: 13475757
Centisome position: 80.8
GC content: 66.97
Gene sequence:
>1323_bases GTGTCAGACGACCCGTCCAATCTCGAATTCCAGCCGCGCGCCAAGGGCAGCGTCATGGGTTTCCCCGCGCATGAGGGCCG GCCCGGTGCGCTGGGCGAGGTCCATGCCAGGCCGCATCCGCTCATCGAAAAGCCGCGGGTCCTGGTGCAACTCGCCTTCA TGACCGAGGGCGGTTCCGGCGTCGACCATGCCGTGCTTTCCGAACTGTCGCGGCGTCTCGGCATCGCCGCGCCTGACCGT CAGGCCCGCCATCACGCCATGAAATGGGGCAAGGGCTCGCTGCGCTGGGAACGGCATACGGAGTTCTCGACCTATCTCTG GGAAGGCCCGCTTTCCGAAAGCGGCAGGGCGCAGGAGGATACGCCCTTCGGCAACGGCTTTTCGCCGCCCGGCACCGTCA TTTCGGGCATTCGGCTGGAGATCCGCAAATGGACGCAGACGAGCGAGCGGCTGATCGCCGCTTTTGACCCGACCAGCCTT TGCTACTCGCTGGTCGAGCGCGGCAATGCGGCCATCGTCACGGATTTCCGCCAGGATGGCGACGGCATGACCCGCATATT GGTGCTCGACCGTGGCCTGACGCCGGCGCGCACCGGGGCGCTCTCGCAACGACTGATCGACATCGAAACCTACCGCACGC TCGCCATGCTCGGCTTGCCGCTGGCGCTGACCTTGTCGGGCCGCGCCCGCCGCATCGAGGACAGGCTGGCCCAGACCACG CTGGAAATGAAGGTTGCTGAGACCCGTGACAGCCAGACCTTGCTCGCCGACCTGACCGAGCTTGCCGCCGAACTGGAGGC CGACGCTGCCTCCAGTCTCTACCGCTTTGGCGCCAGCCGCGCCTATGACGGCATCGTCGTCGAGCGGCTGGAGGCGCTCG AGGAAGAGGCCGTGCCCGGCTATGATACTTGGGGCGGGTTCCTGCAGCGCCGCGTTGCGCCGGCCATGCGCACCTGTCGC TCGGTCGAGGAGCGGCAAGCCAATCTGTCGCGCAAACTGACCCGCGCCACGACGCTGCTGCGCACCTGGGTCGATGTCGA GGTCGAGAAGCAGAACCGCGACCTGCTTGCCTCGATGAACAACCGCGCCCGACTGCAACTGCGCCTGCAGCAGACCGTCG AAGGCCTCTCGGTTGCCGCTGTCTCCTATTATGTCGTCGGTCTCATAGGCTACGTCGCCAAGGGCGCCTCGATCTTCGGC CATGCTTTCGCGCCCGAGGTGGTCACCGCCGCCTCGGTGCCGGTCGCCATCCTGCTGGTCTGGTGGGGCGTGCGCCGCGT GCGCCGGATGCATTCCGAGCCGGCCAAACACCCGGGCGAATAG
Upstream 100 bases:
>100_bases CAATATCATCTTCGGCTAAACTTTGTTGTTTGCGTCGTCAGCCTATTGGCTCTAGAGGACGCGACTGCAAGAGGGTCTAG AGAACCCCGGGGGACAAGCC
Downstream 100 bases:
>100_bases CGGCAGATTGCCGCTGCGGAAGCCTGTCCCGGCCTGACGCGGGAGCCTCTCGCCACAGCGGCATTTGCAACCAGCGCGCT TCACTGGTAAAAGATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSDDPSNLEFQPRAKGSVMGFPAHEGRPGALGEVHARPHPLIEKPRVLVQLAFMTEGGSGVDHAVLSELSRRLGIAAPDR QARHHAMKWGKGSLRWERHTEFSTYLWEGPLSESGRAQEDTPFGNGFSPPGTVISGIRLEIRKWTQTSERLIAAFDPTSL CYSLVERGNAAIVTDFRQDGDGMTRILVLDRGLTPARTGALSQRLIDIETYRTLAMLGLPLALTLSGRARRIEDRLAQTT LEMKVAETRDSQTLLADLTELAAELEADAASSLYRFGASRAYDGIVVERLEALEEEAVPGYDTWGGFLQRRVAPAMRTCR SVEERQANLSRKLTRATTLLRTWVDVEVEKQNRDLLASMNNRARLQLRLQQTVEGLSVAAVSYYVVGLIGYVAKGASIFG HAFAPEVVTAASVPVAILLVWWGVRRVRRMHSEPAKHPGE
Sequences:
>Translated_440_residues MSDDPSNLEFQPRAKGSVMGFPAHEGRPGALGEVHARPHPLIEKPRVLVQLAFMTEGGSGVDHAVLSELSRRLGIAAPDR QARHHAMKWGKGSLRWERHTEFSTYLWEGPLSESGRAQEDTPFGNGFSPPGTVISGIRLEIRKWTQTSERLIAAFDPTSL CYSLVERGNAAIVTDFRQDGDGMTRILVLDRGLTPARTGALSQRLIDIETYRTLAMLGLPLALTLSGRARRIEDRLAQTT LEMKVAETRDSQTLLADLTELAAELEADAASSLYRFGASRAYDGIVVERLEALEEEAVPGYDTWGGFLQRRVAPAMRTCR SVEERQANLSRKLTRATTLLRTWVDVEVEKQNRDLLASMNNRARLQLRLQQTVEGLSVAAVSYYVVGLIGYVAKGASIFG HAFAPEVVTAASVPVAILLVWWGVRRVRRMHSEPAKHPGE >Mature_439_residues SDDPSNLEFQPRAKGSVMGFPAHEGRPGALGEVHARPHPLIEKPRVLVQLAFMTEGGSGVDHAVLSELSRRLGIAAPDRQ ARHHAMKWGKGSLRWERHTEFSTYLWEGPLSESGRAQEDTPFGNGFSPPGTVISGIRLEIRKWTQTSERLIAAFDPTSLC YSLVERGNAAIVTDFRQDGDGMTRILVLDRGLTPARTGALSQRLIDIETYRTLAMLGLPLALTLSGRARRIEDRLAQTTL EMKVAETRDSQTLLADLTELAAELEADAASSLYRFGASRAYDGIVVERLEALEEEAVPGYDTWGGFLQRRVAPAMRTCRS VEERQANLSRKLTRATTLLRTWVDVEVEKQNRDLLASMNNRARLQLRLQQTVEGLSVAAVSYYVVGLIGYVAKGASIFGH AFAPEVVTAASVPVAILLVWWGVRRVRRMHSEPAKHPGE
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48629; Mature: 48498
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDPSNLEFQPRAKGSVMGFPAHEGRPGALGEVHARPHPLIEKPRVLVQLAFMTEGGSG CCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC VDHAVLSELSRRLGIAAPDRQARHHAMKWGKGSLRWERHTEFSTYLWEGPLSESGRAQED CHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHEEECCCCCCCCCCCCC TPFGNGFSPPGTVISGIRLEIRKWTQTSERLIAAFDPTSLCYSLVERGNAAIVTDFRQDG CCCCCCCCCCCHHHHHHHHHHHHHHCHHHHEEEECCHHHHHHHHHHCCCEEEEECCCCCC DGMTRILVLDRGLTPARTGALSQRLIDIETYRTLAMLGLPLALTLSGRARRIEDRLAQTT CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH LEMKVAETRDSQTLLADLTELAAELEADAASSLYRFGASRAYDGIVVERLEALEEEAVPG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC YDTWGGFLQRRVAPAMRTCRSVEERQANLSRKLTRATTLLRTWVDVEVEKQNRDLLASMN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHCC NRARLQLRLQQTVEGLSVAAVSYYVVGLIGYVAKGASIFGHAFAPEVVTAASVPVAILLV CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH WWGVRRVRRMHSEPAKHPGE HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SDDPSNLEFQPRAKGSVMGFPAHEGRPGALGEVHARPHPLIEKPRVLVQLAFMTEGGSG CCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC VDHAVLSELSRRLGIAAPDRQARHHAMKWGKGSLRWERHTEFSTYLWEGPLSESGRAQED CHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHEEECCCCCCCCCCCCC TPFGNGFSPPGTVISGIRLEIRKWTQTSERLIAAFDPTSLCYSLVERGNAAIVTDFRQDG CCCCCCCCCCCHHHHHHHHHHHHHHCHHHHEEEECCHHHHHHHHHHCCCEEEEECCCCCC DGMTRILVLDRGLTPARTGALSQRLIDIETYRTLAMLGLPLALTLSGRARRIEDRLAQTT CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH LEMKVAETRDSQTLLADLTELAAELEADAASSLYRFGASRAYDGIVVERLEALEEEAVPG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC YDTWGGFLQRRVAPAMRTCRSVEERQANLSRKLTRATTLLRTWVDVEVEKQNRDLLASMN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHCC NRARLQLRLQQTVEGLSVAAVSYYVVGLIGYVAKGASIFGHAFAPEVVTAASVPVAILLV CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH WWGVRRVRRMHSEPAKHPGE HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA