| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475747
Identifier: 13475747
GI number: 13475747
Start: 5677055
End: 5678068
Strand: Reverse
Name: 13475747
Synonym: mll6900
Alternate gene names: NA
Gene position: 5678068-5677055 (Counterclockwise)
Preceding gene: 13475748
Following gene: 13475746
Centisome position: 80.7
GC content: 65.68
Gene sequence:
>1014_bases ATGCCTACCTTGTTCGACATGCTGGCGCAGGCCCAAAACGGCAATGGCATGCAGGCGCTTGCCCAGCAATATGGGCTTTC GATGCAGCAGACACAGGCCGCGGTCGCCGCCCTGCTGCCGGCCTTTTCGCAGGGGTTGCAACGCAACACCGCCGATCCTT ACGGGCTCGGCGCCTTCATGACGGCGATGGCAAGCGGCCAGCACGCCAAATATTTCGAGGACGCGACGCGCGCCTTCTCG CCGCAAGGCGTCGACGAAGGCAATGGCATTCTCGGGCATCTGTTCGGCTCGAAGGACCTGTCGCGCGCCGTCGCCAGCCA GGCGGCGCAGGCGAGCGGCGTCAGCCAGCAGATCCTGCAGCAGATGCTGCCGGCGATCGCCTCGATGGTGATGGGCGGAC TGTTCAAGCAAACGACAAGTCAGATGCAGGCCGCAGGCGGTTTCGGCGGCGGCAACAATCCGCTCGGCGAGATCATCGAG CAGATGATGCGCCAAGGCGGCATGCAGGCGCAGGCGCCACAGCAGCGCCAGGCACCTCAGCCCCAGAACCCGATGGACAA CCCGCTCGGCAAGGTCTTGCAGGACATGTTCGGCGGCGGCGCACCGCAACCGCAGCCGCAGCCGGCACCCAATCCCTATG GCGACAATCCATTGGGGAAGGTGCTGCAGGACATGTTCGGTGGCGGTACCCCGCAGCCGCAAGGCCGGGCGCAGCCGCAG CAGACGCAAAGCCCCTATGGCGACAACCCGCTCGGGAAAATCTTCGAAGAGATGCTGCGCGGAGGTGGTGGAGGTGGCTT CGGCATGCCTGGGGGGCAGCCGGTGCCGCAGCCGCAAGCTCCACAGCAGCGCCAGGCGCCGCAGCCGCAGACCAATCCGA GCGGCCGGCCAAGAAACCCGTTCGACGATCTGTTCGGCAAGATGTTCGAGACCGGCGCCCAGCAGCGTGACGACTACCAG AAGGGCGTAGAAACGATCTTCGACCAGTTCAAGCGGGACATGGACCGGCGGTAG
Upstream 100 bases:
>100_bases ACGCCTACTAAGCTGGCGCGTTAGGGAGCGGCAAAAGCCGCTTCAATCGACCGTTGAAACGAATTAGGCTCCCTTCCGAG GAATTCAGGAGGAGAAGCCG
Downstream 100 bases:
>100_bases GTGCCAAACCTACGGCCCTTTCTGAGCAGGCCAGAAAAGAAGAGCCCGGTCCTTGGGAGGACCGGGCAACGTGCAGGCAG GCCGGCGGGGAACCGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MPTLFDMLAQAQNGNGMQALAQQYGLSMQQTQAAVAALLPAFSQGLQRNTADPYGLGAFMTAMASGQHAKYFEDATRAFS PQGVDEGNGILGHLFGSKDLSRAVASQAAQASGVSQQILQQMLPAIASMVMGGLFKQTTSQMQAAGGFGGGNNPLGEIIE QMMRQGGMQAQAPQQRQAPQPQNPMDNPLGKVLQDMFGGGAPQPQPQPAPNPYGDNPLGKVLQDMFGGGTPQPQGRAQPQ QTQSPYGDNPLGKIFEEMLRGGGGGGFGMPGGQPVPQPQAPQQRQAPQPQTNPSGRPRNPFDDLFGKMFETGAQQRDDYQ KGVETIFDQFKRDMDRR
Sequences:
>Translated_337_residues MPTLFDMLAQAQNGNGMQALAQQYGLSMQQTQAAVAALLPAFSQGLQRNTADPYGLGAFMTAMASGQHAKYFEDATRAFS PQGVDEGNGILGHLFGSKDLSRAVASQAAQASGVSQQILQQMLPAIASMVMGGLFKQTTSQMQAAGGFGGGNNPLGEIIE QMMRQGGMQAQAPQQRQAPQPQNPMDNPLGKVLQDMFGGGAPQPQPQPAPNPYGDNPLGKVLQDMFGGGTPQPQGRAQPQ QTQSPYGDNPLGKIFEEMLRGGGGGGFGMPGGQPVPQPQAPQQRQAPQPQTNPSGRPRNPFDDLFGKMFETGAQQRDDYQ KGVETIFDQFKRDMDRR >Mature_336_residues PTLFDMLAQAQNGNGMQALAQQYGLSMQQTQAAVAALLPAFSQGLQRNTADPYGLGAFMTAMASGQHAKYFEDATRAFSP QGVDEGNGILGHLFGSKDLSRAVASQAAQASGVSQQILQQMLPAIASMVMGGLFKQTTSQMQAAGGFGGGNNPLGEIIEQ MMRQGGMQAQAPQQRQAPQPQNPMDNPLGKVLQDMFGGGAPQPQPQPAPNPYGDNPLGKVLQDMFGGGTPQPQGRAQPQQ TQSPYGDNPLGKIFEEMLRGGGGGGFGMPGGQPVPQPQAPQQRQAPQPQTNPSGRPRNPFDDLFGKMFETGAQQRDDYQK GVETIFDQFKRDMDRR
Specific function: Unknown
COG id: COG5403
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35881; Mature: 35750
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLFDMLAQAQNGNGMQALAQQYGLSMQQTQAAVAALLPAFSQGLQRNTADPYGLGAFM CCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TAMASGQHAKYFEDATRAFSPQGVDEGNGILGHLFGSKDLSRAVASQAAQASGVSQQILQ HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHCCHHHHHHH QMLPAIASMVMGGLFKQTTSQMQAAGGFGGGNNPLGEIIEQMMRQGGMQAQAPQQRQAPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCC PQNPMDNPLGKVLQDMFGGGAPQPQPQPAPNPYGDNPLGKVLQDMFGGGTPQPQGRAQPQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCH QTQSPYGDNPLGKIFEEMLRGGGGGGFGMPGGQPVPQPQAPQQRQAPQPQTNPSGRPRNP HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC FDDLFGKMFETGAQQRDDYQKGVETIFDQFKRDMDRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTLFDMLAQAQNGNGMQALAQQYGLSMQQTQAAVAALLPAFSQGLQRNTADPYGLGAFM CHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TAMASGQHAKYFEDATRAFSPQGVDEGNGILGHLFGSKDLSRAVASQAAQASGVSQQILQ HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHCCHHHHHHH QMLPAIASMVMGGLFKQTTSQMQAAGGFGGGNNPLGEIIEQMMRQGGMQAQAPQQRQAPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCC PQNPMDNPLGKVLQDMFGGGAPQPQPQPAPNPYGDNPLGKVLQDMFGGGTPQPQGRAQPQ CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCH QTQSPYGDNPLGKIFEEMLRGGGGGGFGMPGGQPVPQPQAPQQRQAPQPQTNPSGRPRNP HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC FDDLFGKMFETGAQQRDDYQKGVETIFDQFKRDMDRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA