| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475685
Identifier: 13475685
GI number: 13475685
Start: 5609137
End: 5610348
Strand: Direct
Name: 13475685
Synonym: mlr6817
Alternate gene names: NA
Gene position: 5609137-5610348 (Clockwise)
Preceding gene: 13475684
Following gene: 13475686
Centisome position: 79.72
GC content: 67.82
Gene sequence:
>1212_bases ATGGCGAGCACTTCACCATTTCGGCCAAGATCGGGGCGCTCTGACGATGCTCTCCACCATCCTCAACACAAGGCCGACGA TCCGCCGCCTGATCGCGCTGGCGATCGCCGCGGTCACGGCCTGCGTGCTTGCCTGGGTGGTGTTCGCGGCGTTCGACAGC GTCGCCTCCGTACAGGCCGGGATCGAGGAAAAGCGCGAGCTTCTCGGCCAGTTGCAGAGCGTGGCCGCCCTGGCAAAGCG CCTCGACAGCGCCGCCAGTCCGGAAGCCGCGGCCAATCCCGAATTTCTCACCGGCGGCAGCGAGGCGATCATCCGCGGCG GGCTGCAGACCCGGCTGAACGCGATTGCCGCCGCCAATGGGGTCAGCGTGCTGTCGGCTGGCAATGCACCGGTGCTCAGC GAAGCCGGCGTCGATTTCATCGGGCTGCGGGCCAACCTTTCGGGATCGCTGGAAGGCATCCACAACGCCATCCTCGCCAT CGAGACGTCGCTGCCGGTGCTGTTCATCCGCGAGGCCACCTTGCGCACCACCGATGTCGGGCCGGCGGCGGGACGGACCG GCGATCCCGAGCTTTTCGCCGAGATCCTGTTTTACGGGCCGCTGCAAACACCGATGGCACCCGCCGGGGTCAAACCATGA CCGGGAAATTCGCAGGCCTGGCGATTGCGGCTGTCATTGCGGCCCTCGCTTTGGTCAATGTCGCGCTCTTCGACACGCCT GTCGATATCACGCCCGTCGCTTCCGGCAAGGGGCATGATGGCGGCCTCGTCTCAGTCGCGGGATCGCTGCAATTTCCCGA AGCCGGCGATTTCAGCGAGACGTTCCAGCGTCCGCTGTTCACGCCGACACGCCGGAAATTCGTGCCCCCGCCGGTCGCGC CGCCGCCGGTGGAGGTTGCCGCTGCCCCGGTCGAGCAGGCGCCGGCGCCGCCGCCATCCGAAGCGCCACCGGCCGTCGCC CCATCGCTGCTGGGCATCAGCATTCACGGCGGCGCCGCGAAGGCGCTGCTGCGCGTCGCCGGCAGCGAAGCCGCGGTCTG GTATGGCAGTGGAGACACGGTTGACGGCTGGAGGGTGTCGGCGGTCGACAAGGATCAGGCCGTGCTGGAGCGGGATGGCA AGCTGGCGCGCATCCCGCTTTATCCGCCATGGAAGAATGTCCCGGCACCCGCGAATGCGCCGCCGCCACTCCCGAGCGAA CCGCAACTATGA
Upstream 100 bases:
>100_bases TTTTCCACCTCGGCCGCCGAACTGATCCAGCCGATCGACGCCTCGCCGCTGTTTTCGGCGCCTGAATTCGCCTCGCCGGT GGTCAAGGTTCCCGGTCAGG
Downstream 100 bases:
>100_bases GCGACAGCGCACTCCATGATAGCGCGGGCACCAACTGGCGGGATGAAAGCGCCCGCAGCGGCTTTTCGCTGGTTGCCGTG CTGGTGTTCATGCTGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MASTSPFRPRSGRSDDALHHPQHKADDPPPDRAGDRRGHGLRACLGGVRGVRQRRLRTGRDRGKARASRPVAERGRPGKA PRQRRQSGSRGQSRISHRRQRGDHPRRAADPAERDCRRQWGQRAVGWQCTGAQRSRRRFHRAAGQPFGIAGRHPQRHPRH RDVAAGAVHPRGHLAHHRCRAGGGTDRRSRAFRRDPVLRAAANTDGTRRGQTMTGKFAGLAIAAVIAALALVNVALFDTP VDITPVASGKGHDGGLVSVAGSLQFPEAGDFSETFQRPLFTPTRRKFVPPPVAPPPVEVAAAPVEQAPAPPPSEAPPAVA PSLLGISIHGGAAKALLRVAGSEAAVWYGSGDTVDGWRVSAVDKDQAVLERDGKLARIPLYPPWKNVPAPANAPPPLPSE PQL
Sequences:
>Translated_403_residues MASTSPFRPRSGRSDDALHHPQHKADDPPPDRAGDRRGHGLRACLGGVRGVRQRRLRTGRDRGKARASRPVAERGRPGKA PRQRRQSGSRGQSRISHRRQRGDHPRRAADPAERDCRRQWGQRAVGWQCTGAQRSRRRFHRAAGQPFGIAGRHPQRHPRH RDVAAGAVHPRGHLAHHRCRAGGGTDRRSRAFRRDPVLRAAANTDGTRRGQTMTGKFAGLAIAAVIAALALVNVALFDTP VDITPVASGKGHDGGLVSVAGSLQFPEAGDFSETFQRPLFTPTRRKFVPPPVAPPPVEVAAAPVEQAPAPPPSEAPPAVA PSLLGISIHGGAAKALLRVAGSEAAVWYGSGDTVDGWRVSAVDKDQAVLERDGKLARIPLYPPWKNVPAPANAPPPLPSE PQL >Mature_402_residues ASTSPFRPRSGRSDDALHHPQHKADDPPPDRAGDRRGHGLRACLGGVRGVRQRRLRTGRDRGKARASRPVAERGRPGKAP RQRRQSGSRGQSRISHRRQRGDHPRRAADPAERDCRRQWGQRAVGWQCTGAQRSRRRFHRAAGQPFGIAGRHPQRHPRHR DVAAGAVHPRGHLAHHRCRAGGGTDRRSRAFRRDPVLRAAANTDGTRRGQTMTGKFAGLAIAAVIAALALVNVALFDTPV DITPVASGKGHDGGLVSVAGSLQFPEAGDFSETFQRPLFTPTRRKFVPPPVAPPPVEVAAAPVEQAPAPPPSEAPPAVAP SLLGISIHGGAAKALLRVAGSEAAVWYGSGDTVDGWRVSAVDKDQAVLERDGKLARIPLYPPWKNVPAPANAPPPLPSEP QL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43310; Mature: 43179
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTSPFRPRSGRSDDALHHPQHKADDPPPDRAGDRRGHGLRACLGGVRGVRQRRLRTGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DRGKARASRPVAERGRPGKAPRQRRQSGSRGQSRISHRRQRGDHPRRAADPAERDCRRQW HHHHHHHCCCHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH GQRAVGWQCTGAQRSRRRFHRAAGQPFGIAGRHPQRHPRHRDVAAGAVHPRGHLAHHRCR CCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AGGGTDRRSRAFRRDPVLRAAANTDGTRRGQTMTGKFAGLAIAAVIAALALVNVALFDTP CCCCCCHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VDITPVASGKGHDGGLVSVAGSLQFPEAGDFSETFQRPLFTPTRRKFVPPPVAPPPVEVA CCCEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCHHHC AAPVEQAPAPPPSEAPPAVAPSLLGISIHGGAAKALLRVAGSEAAVWYGSGDTVDGWRVS CCCHHHCCCCCCCCCCCCCCCHHEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCEEEE AVDKDQAVLERDGKLARIPLYPPWKNVPAPANAPPPLPSEPQL CCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASTSPFRPRSGRSDDALHHPQHKADDPPPDRAGDRRGHGLRACLGGVRGVRQRRLRTGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DRGKARASRPVAERGRPGKAPRQRRQSGSRGQSRISHRRQRGDHPRRAADPAERDCRRQW HHHHHHHCCCHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH GQRAVGWQCTGAQRSRRRFHRAAGQPFGIAGRHPQRHPRHRDVAAGAVHPRGHLAHHRCR CCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AGGGTDRRSRAFRRDPVLRAAANTDGTRRGQTMTGKFAGLAIAAVIAALALVNVALFDTP CCCCCCHHHHHHHHCCHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VDITPVASGKGHDGGLVSVAGSLQFPEAGDFSETFQRPLFTPTRRKFVPPPVAPPPVEVA CCCEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCHHHC AAPVEQAPAPPPSEAPPAVAPSLLGISIHGGAAKALLRVAGSEAAVWYGSGDTVDGWRVS CCCHHHCCCCCCCCCCCCCCCHHEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCEEEE AVDKDQAVLERDGKLARIPLYPPWKNVPAPANAPPPLPSEPQL CCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA