| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yetM [H]
Identifier: 13475664
GI number: 13475664
Start: 5587739
End: 5588878
Strand: Direct
Name: yetM [H]
Synonym: mlr6788
Alternate gene names: 13475664
Gene position: 5587739-5588878 (Clockwise)
Preceding gene: 13475663
Following gene: 13475665
Centisome position: 79.42
GC content: 62.72
Gene sequence:
>1140_bases ATGGCCAATGTAAACAAAACTCCGGGCAAAACGCGTCGTGCCGAGGTGGCCGGCGGCGGCTTTGCCGGCCTGACAGCCGC CATCGCTCTCAAGCAGAATGGTTGGGATGTCAGGCTGCACGAAAAGAGCTCGGAACTGAGGGCATTCGGCGCGGGCATCT ATCTCTGGCACAATGGCCTTCGCGTGCTCGAAGGGCTGGGCGCCCTGGACGATGTTCTCCAGGGCTCGCACACGCCTCCG ACCTACGAGACCTGGATGCACAACAAGTCGGTTTCCAAGGAGACGTTCAACGGTCTCCCCTGGCGCATCATGACCCGCAG CCACCTGCACGATGCCCTGGTCAACCGCGCCCGTGCCCTGGGTGTCGACATAAGCGTCAATTCCGAGGCGGTTGCCGCCG ATCCGGTAGGGCGCCTGACCCTCCAGACCGGCGAGGTTCTCGAAGCCGACTTGATCGTCGGCGCCGATGGCGTCGGCTCC AAGGTCAGGGATTCCATCGGCTTCAAACAGGATCGCTGGGTTTCGAAAGATGGTCTCATCCGGCTGATCGTCCCGCGCAT GAAGAAAGAGCTCGGCCATGGCGAGTGGGACAACACCATCGACATGTGGAACTTCTGGCCGCGTGTGCAGCGGATTCTCT ATTCGCCCTGCAATGAGAATGAGCTCTATCTCGGCTTGATGGCTCCGGCCGCCGATCCGCGCGGATCGAGCGTGCCGATC GATCTCGAAGTCTGGGTCGAGATGTTTCCTTTCCTGGAGCCGTGCCTGATCGAGGCGGCCAAGCTTAAAACCGCCAGGTA CGACAAGTACGAAACGACCAAGCTGGATAGCTGGACAAGAGGCAAGGTCGCCCTCGTGGGGGATGCCGCGCATGCCATGT GCCCGGCCCTTGCCCAGGGCGCCGGTTGCGCGATGGTCAATGCCTTCAGCCTGTCGCAGGACCTGGAGGAGGGCTCTTCG GTCGAAGATGCGCTGGTCGCATGGGAGACACGCATTCGCCCGATCACGGATCGCTGCCAGGCCCTTTCTGGCGACTATGC GGCGAACCGCTCGCTCTCGAAGGGAAACATGTTCACGCCGGCGGCGCTGGAGGCCGCCCGCTACGACCCGCTGCGCCGTG TCTACTCGTGGCCGCAGTAG
Upstream 100 bases:
>100_bases CAACGAGGTATCTCCCGAGATCACGTTGAAAGCCATCACCAACTTCATAGACGCCTGACGGCCAAGCGCCGTCTTCTTGT ATGCAGCATCAGGATAGAAA
Downstream 100 bases:
>100_bases CGTCGGACGAGCCGGCCAAAGAATTAATCGGCGCGTGCGGAAACAGCGCGCGCCCTTCAGGAGATAAAGATGAACTATTC CAGTGAAGTCGAACGAGATT
Product: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPP TYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS KVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPI DLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSS VEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTPAALEAARYDPLRRVYSWPQ
Sequences:
>Translated_379_residues MANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPP TYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS KVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPI DLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSS VEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTPAALEAARYDPLRRVYSWPQ >Mature_378_residues ANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPT YETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSK VRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPID LEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSV EDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTPAALEAARYDPLRRVYSWPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: NA
Molecular weight: Translated: 41748; Mature: 41617
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGL CCCCCCCCCCCCEEEECCCCHHHHHEEEEEECCCCEEEEECCCHHHHHHHCEEEEEECHH RVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARAL HHHHHCCHHHHHHCCCCCCCCHHHHHCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHE GVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLI EEEEECCCCEEECCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEE RLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPI EEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC DLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCC AGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTP CCEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCH AALEAARYDPLRRVYSWPQ HHHHHHHCCHHHHHHCCCC >Mature Secondary Structure ANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGL CCCCCCCCCCCEEEECCCCHHHHHEEEEEECCCCEEEEECCCHHHHHHHCEEEEEECHH RVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARAL HHHHHCCHHHHHHCCCCCCCCHHHHHCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHE GVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLI EEEEECCCCEEECCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEE RLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPI EEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC DLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCC AGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTP CCEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCH AALEAARYDPLRRVYSWPQ HHHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]