| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475634
Identifier: 13475634
GI number: 13475634
Start: 5549210
End: 5550469
Strand: Direct
Name: 13475634
Synonym: mlr6754
Alternate gene names: NA
Gene position: 5549210-5550469 (Clockwise)
Preceding gene: 13475633
Following gene: 13475635
Centisome position: 78.87
GC content: 60.95
Gene sequence:
>1260_bases ATGATCCGTGATGTGATCCTGGCCTTCGGCATCGCAATGTCCTACGCGGTGCAGCTCAGCATCCCGGGGCTGCCGTTCGG CTACAGCGAACTGTTCCTCACGCTCTGGATATTGCTGTCGATCACCCGCATCCTTGGCGGCGGCCGACTGGAGGTTACGC CGGCCCTCACCAAACTTGCCTGTTTCTGGGTGATCCTGACGCTTGCCCTGGGCGTGGGTTCCATCATCGGCTTTCTGACG ACCACGCTGTTCCTCGATCCGCTGTTGCATGACACGATGGCGTATGTGCTGTTGGTCTGCGTTACCTGCCTGGCTGCCGC GGAACCCAACGCAGCTTCCCGTTTACGCCGTATCGCCTGGTGGATGATCGCTGTCGCGAATGCAGGCTTTGTCGTTCAGG TGGGGCTTGGTTTCGGCTGGATCCATCAGTCTGGCGTCCACCCCTGGTTCTGGGACCGCTTCAGCGGCTGGTCTGACAAT CCGAACCAGCTTGCGCTCTACTGTGCGCTCCTCGGTCCACTGGCCCTGCATCTTGCCACAACCACCAGCAATCCATGGGG AAGATGTCTCGGGCTGTCCAGCCTGATCCTCACCTTCTATGTCGGAAGGCTGACAAAGAGCGATACCTATCTCTATACGA CGATCCTGGCCTGCCTGATCCTTCTTGGGCTGAGGATTCGGGCATGGCTCACTGGCGACGGGGGCAAGGTCAGCCTTTCA CGGCAACTTGCCCTCCTGTTCACCATGGCATTCCTTCCATTGGCGGTCTCCGTCGCGCCTTACGCCATCAGCGAGGCCGC CAACGCCGAAGACTTCGCCAAGAGCCTCACCAAGGACAAGGGCGGGGAAGCAACCGCGGAAACCGCGGCACTTCGCCTCC AGCTTTGGGACGAGGCATTGGACAAGGGAGCAAGATCCGGATCGCTGGGTCTCGGACCAGGCCCGCACCTTGATCGTCCC TCCACAGTCGATCAGCAGTTTCTGCCGCGGCCTTTCGAGGCCCATAGCACGATCCTCGATCTCTACACTCAGGGTGGCCT GATTTCAGTCCTGGCCTTGCTGTGGATCCTCGGCTCGGCCGCTATGTCCGCCTGGGGTGCGAGACAGGACACGCTCGTCG CGCTCGTGGCATCGATCGCGGTCTTCAGTGCTCCGCACCTGATCATCCGCCATCCGATCGTGTGGTTCTGTCTGACCCTC TGCCTTGTCGCCGGAACGCCGCAGACGGTCCCTGCGATCGTTCGCCAGAGGAGATATTAG
Upstream 100 bases:
>100_bases CTGTCCTCGGTGGCAAATACCGCGGCAGTCTTGCTCGGCCGGCGCCCGTGATCTCGAGGGAAGAGGGTGCGCGGGCCCCC CGACTGGGTGAGGCGCGGCA
Downstream 100 bases:
>100_bases AATGTGTGGGATCGCCGGAATTCTCTTGGCGCCCGATGCAGCCAATACCAACGCGCTCAGGGCGATCGGGCCGATGATGA TGGCCCTTCGTCATCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MIRDVILAFGIAMSYAVQLSIPGLPFGYSELFLTLWILLSITRILGGGRLEVTPALTKLACFWVILTLALGVGSIIGFLT TTLFLDPLLHDTMAYVLLVCVTCLAAAEPNAASRLRRIAWWMIAVANAGFVVQVGLGFGWIHQSGVHPWFWDRFSGWSDN PNQLALYCALLGPLALHLATTTSNPWGRCLGLSSLILTFYVGRLTKSDTYLYTTILACLILLGLRIRAWLTGDGGKVSLS RQLALLFTMAFLPLAVSVAPYAISEAANAEDFAKSLTKDKGGEATAETAALRLQLWDEALDKGARSGSLGLGPGPHLDRP STVDQQFLPRPFEAHSTILDLYTQGGLISVLALLWILGSAAMSAWGARQDTLVALVASIAVFSAPHLIIRHPIVWFCLTL CLVAGTPQTVPAIVRQRRY
Sequences:
>Translated_419_residues MIRDVILAFGIAMSYAVQLSIPGLPFGYSELFLTLWILLSITRILGGGRLEVTPALTKLACFWVILTLALGVGSIIGFLT TTLFLDPLLHDTMAYVLLVCVTCLAAAEPNAASRLRRIAWWMIAVANAGFVVQVGLGFGWIHQSGVHPWFWDRFSGWSDN PNQLALYCALLGPLALHLATTTSNPWGRCLGLSSLILTFYVGRLTKSDTYLYTTILACLILLGLRIRAWLTGDGGKVSLS RQLALLFTMAFLPLAVSVAPYAISEAANAEDFAKSLTKDKGGEATAETAALRLQLWDEALDKGARSGSLGLGPGPHLDRP STVDQQFLPRPFEAHSTILDLYTQGGLISVLALLWILGSAAMSAWGARQDTLVALVASIAVFSAPHLIIRHPIVWFCLTL CLVAGTPQTVPAIVRQRRY >Mature_419_residues MIRDVILAFGIAMSYAVQLSIPGLPFGYSELFLTLWILLSITRILGGGRLEVTPALTKLACFWVILTLALGVGSIIGFLT TTLFLDPLLHDTMAYVLLVCVTCLAAAEPNAASRLRRIAWWMIAVANAGFVVQVGLGFGWIHQSGVHPWFWDRFSGWSDN PNQLALYCALLGPLALHLATTTSNPWGRCLGLSSLILTFYVGRLTKSDTYLYTTILACLILLGLRIRAWLTGDGGKVSLS RQLALLFTMAFLPLAVSVAPYAISEAANAEDFAKSLTKDKGGEATAETAALRLQLWDEALDKGARSGSLGLGPGPHLDRP STVDQQFLPRPFEAHSTILDLYTQGGLISVLALLWILGSAAMSAWGARQDTLVALVASIAVFSAPHLIIRHPIVWFCLTL CLVAGTPQTVPAIVRQRRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45377; Mature: 45377
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDVILAFGIAMSYAVQLSIPGLPFGYSELFLTLWILLSITRILGGGRLEVTPALTKLA CHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHH CFWVILTLALGVGSIIGFLTTTLFLDPLLHDTMAYVLLVCVTCLAAAEPNAASRLRRIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH WMIAVANAGFVVQVGLGFGWIHQSGVHPWFWDRFSGWSDNPNQLALYCALLGPLALHLAT HHHHHHCCCEEEEECCCCHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC TTSNPWGRCLGLSSLILTFYVGRLTKSDTYLYTTILACLILLGLRIRAWLTGDGGKVSLS CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEHHH RQLALLFTMAFLPLAVSVAPYAISEAANAEDFAKSLTKDKGGEATAETAALRLQLWDEAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH DKGARSGSLGLGPGPHLDRPSTVDQQFLPRPFEAHSTILDLYTQGGLISVLALLWILGSA HCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AMSAWGARQDTLVALVASIAVFSAPHLIIRHPIVWFCLTLCLVAGTPQTVPAIVRQRRY HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MIRDVILAFGIAMSYAVQLSIPGLPFGYSELFLTLWILLSITRILGGGRLEVTPALTKLA CHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHH CFWVILTLALGVGSIIGFLTTTLFLDPLLHDTMAYVLLVCVTCLAAAEPNAASRLRRIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH WMIAVANAGFVVQVGLGFGWIHQSGVHPWFWDRFSGWSDNPNQLALYCALLGPLALHLAT HHHHHHCCCEEEEECCCCHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC TTSNPWGRCLGLSSLILTFYVGRLTKSDTYLYTTILACLILLGLRIRAWLTGDGGKVSLS CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEHHH RQLALLFTMAFLPLAVSVAPYAISEAANAEDFAKSLTKDKGGEATAETAALRLQLWDEAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH DKGARSGSLGLGPGPHLDRPSTVDQQFLPRPFEAHSTILDLYTQGGLISVLALLWILGSA HCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AMSAWGARQDTLVALVASIAVFSAPHLIIRHPIVWFCLTLCLVAGTPQTVPAIVRQRRY HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA