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The map label for this gene is 13475564

Identifier: 13475564

GI number: 13475564

Start: 5461756

End: 5463018

Strand: Reverse

Name: 13475564

Synonym: mll6666

Alternate gene names: NA

Gene position: 5463018-5461756 (Counterclockwise)

Preceding gene: 13475565

Following gene: 13475563

Centisome position: 77.64

GC content: 63.18

Gene sequence:

>1263_bases
ATGGCCTTCAATCTTGACGCGCTGGCGTCGGTTGTTGTGGACGACAGCATCAAAGGCATTCCGTTCGGCGCAAGGCTCGG
AATCGCCGATATCGCCAATCAGGGCTGGAATGTCCTGGCCGGCGACTTGCCACTGCCCGCGGCAATTATCCGTGCCGATG
CGCTCGCCCACAATTCGCGCTGGATGCAGCGTTTCGTATCCGAGCGCGGCGCGCTGATTGCACCGCATGTCAAGACGACG
ATGTGCCCGCAGATCATTGCCCGCCAGATCGCCGATGGCGCTTGGGGCGTAACCGTCGCGACAGTCCAGCAGATGCGCGT
CTGCCGCAATTTCGGTGCGGACCGGATCATCCTCGCCAATCAGGCGGTCGGACGATCGGAGCTCGACGCGATCACCGCGA
TGGTCAAGGAGCCGGACCTCGATTTCATGATGATCGTCGACAGCGCCGTCGGCATCGAAGCGGCGGCCGAAGCAGTGCGC
CGCAACCGCCTCGACCGCCCGCTGCAACTGCTTCTCGAACGCGGCTACCCTGGCGGCCGCACCGGCTGCCGGACCAATGA
CATCGCCCTTGCCCTTGCCAGGCAGATACGCGCCACCCCGGAGCTTCGCCTTGTCGGGATCGAGGCGTTCGAAGGTCTGA
TACAGACCGAAAACGGGTCGCCCGAGCAGGCGGTCGGGCTTTTCATGGATGAAATCGCCGCGCTCTTTGGCCTTTGCGCG
GATGATGGTTTGTTCGAGAGCGATGCGCCGCTGGTCACCGCCGGCGGCTCCTCGCATTACGATATCGTCATCGACAGGCT
GGCGCACTGCACCGCCCGCGTGGTGACAAGAAGTGGCTGCTACGTCACGCACGATTCAGGGCTCTATCGGATCGCCCATC
AGCGCTTGCAAGCCAAGATCGGAGAGCAGGACGGCCTGCGCCGGGCGCTTGAGATCTGGACCTATGTGCAGTCGATTCCA
GAGCCGGGGCTTGCCCTGCTGACTGCCGGCCGGCGCGACTGCGGCACGGATTCGGGATTTCCCGTGCCGCTGCTCCTGTC
GAGCGCGGGCGCCTATCCACGGGACTTGCCGCCAGGGTGCGAAGTGATCAACCTCAACGATCAGCACGCTTACATGCGCT
TCCCGCCCGATCTACCGCTTGCCGTCGGCGACCGTGTCGGGCTCGGCATTTCCCATCCATGCACGACATTCGACAAGTGG
CAGATCATCTACCTTGTCGACAGCGACTACAGGGTGATCGAAGCGATGAAGACCTTCTTCTGA

Upstream 100 bases:

>100_bases
CCGGCTTCGATCCCGATGCGGTGTCACCGGCTCGCGCCGGCCTTGGCAGCGCCTCACATGTCTCCGTTGCGTAGCTCTGG
TTTTGGGGGGAGATCGGCCA

Downstream 100 bases:

>100_bases
GCATTCGGCGAAAGACCCTGACTGCTTCCGCTTGATTTCCGAGGAGACCACAATGAGCAGACTTTCCGCCGCTGCCATCG
AGCTGTTCGAGGACCTGATC

Product: D-serine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MAFNLDALASVVVDDSIKGIPFGARLGIADIANQGWNVLAGDLPLPAAIIRADALAHNSRWMQRFVSERGALIAPHVKTT
MCPQIIARQIADGAWGVTVATVQQMRVCRNFGADRIILANQAVGRSELDAITAMVKEPDLDFMMIVDSAVGIEAAAEAVR
RNRLDRPLQLLLERGYPGGRTGCRTNDIALALARQIRATPELRLVGIEAFEGLIQTENGSPEQAVGLFMDEIAALFGLCA
DDGLFESDAPLVTAGGSSHYDIVIDRLAHCTARVVTRSGCYVTHDSGLYRIAHQRLQAKIGEQDGLRRALEIWTYVQSIP
EPGLALLTAGRRDCGTDSGFPVPLLLSSAGAYPRDLPPGCEVINLNDQHAYMRFPPDLPLAVGDRVGLGISHPCTTFDKW
QIIYLVDSDYRVIEAMKTFF

Sequences:

>Translated_420_residues
MAFNLDALASVVVDDSIKGIPFGARLGIADIANQGWNVLAGDLPLPAAIIRADALAHNSRWMQRFVSERGALIAPHVKTT
MCPQIIARQIADGAWGVTVATVQQMRVCRNFGADRIILANQAVGRSELDAITAMVKEPDLDFMMIVDSAVGIEAAAEAVR
RNRLDRPLQLLLERGYPGGRTGCRTNDIALALARQIRATPELRLVGIEAFEGLIQTENGSPEQAVGLFMDEIAALFGLCA
DDGLFESDAPLVTAGGSSHYDIVIDRLAHCTARVVTRSGCYVTHDSGLYRIAHQRLQAKIGEQDGLRRALEIWTYVQSIP
EPGLALLTAGRRDCGTDSGFPVPLLLSSAGAYPRDLPPGCEVINLNDQHAYMRFPPDLPLAVGDRVGLGISHPCTTFDKW
QIIYLVDSDYRVIEAMKTFF
>Mature_419_residues
AFNLDALASVVVDDSIKGIPFGARLGIADIANQGWNVLAGDLPLPAAIIRADALAHNSRWMQRFVSERGALIAPHVKTTM
CPQIIARQIADGAWGVTVATVQQMRVCRNFGADRIILANQAVGRSELDAITAMVKEPDLDFMMIVDSAVGIEAAAEAVRR
NRLDRPLQLLLERGYPGGRTGCRTNDIALALARQIRATPELRLVGIEAFEGLIQTENGSPEQAVGLFMDEIAALFGLCAD
DGLFESDAPLVTAGGSSHYDIVIDRLAHCTARVVTRSGCYVTHDSGLYRIAHQRLQAKIGEQDGLRRALEIWTYVQSIPE
PGLALLTAGRRDCGTDSGFPVPLLLSSAGAYPRDLPPGCEVINLNDQHAYMRFPPDLPLAVGDRVGLGISHPCTTFDKWQ
IIYLVDSDYRVIEAMKTFF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 45617; Mature: 45486

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNLDALASVVVDDSIKGIPFGARLGIADIANQGWNVLAGDLPLPAAIIRADALAHNSR
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHH
WMQRFVSERGALIAPHVKTTMCPQIIARQIADGAWGVTVATVQQMRVCRNFGADRIILAN
HHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
QAVGRSELDAITAMVKEPDLDFMMIVDSAVGIEAAAEAVRRNRLDRPLQLLLERGYPGGR
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
TGCRTNDIALALARQIRATPELRLVGIEAFEGLIQTENGSPEQAVGLFMDEIAALFGLCA
CCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
DDGLFESDAPLVTAGGSSHYDIVIDRLAHCTARVVTRSGCYVTHDSGLYRIAHQRLQAKI
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHC
GEQDGLRRALEIWTYVQSIPEPGLALLTAGRRDCGTDSGFPVPLLLSSAGAYPRDLPPGC
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
EVINLNDQHAYMRFPPDLPLAVGDRVGLGISHPCTTFDKWQIIYLVDSDYRVIEAMKTFF
EEEEECCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
AFNLDALASVVVDDSIKGIPFGARLGIADIANQGWNVLAGDLPLPAAIIRADALAHNSR
CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHH
WMQRFVSERGALIAPHVKTTMCPQIIARQIADGAWGVTVATVQQMRVCRNFGADRIILAN
HHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
QAVGRSELDAITAMVKEPDLDFMMIVDSAVGIEAAAEAVRRNRLDRPLQLLLERGYPGGR
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
TGCRTNDIALALARQIRATPELRLVGIEAFEGLIQTENGSPEQAVGLFMDEIAALFGLCA
CCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
DDGLFESDAPLVTAGGSSHYDIVIDRLAHCTARVVTRSGCYVTHDSGLYRIAHQRLQAKI
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHC
GEQDGLRRALEIWTYVQSIPEPGLALLTAGRRDCGTDSGFPVPLLLSSAGAYPRDLPPGC
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
EVINLNDQHAYMRFPPDLPLAVGDRVGLGISHPCTTFDKWQIIYLVDSDYRVIEAMKTFF
EEEEECCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]