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The map label for this gene is ycjP [C]

Identifier: 13475553

GI number: 13475553

Start: 5450387

End: 5451265

Strand: Direct

Name: ycjP [C]

Synonym: mlr6653

Alternate gene names: 13475553

Gene position: 5450387-5451265 (Clockwise)

Preceding gene: 13475552

Following gene: 13475554

Centisome position: 77.46

GC content: 56.54

Gene sequence:

>879_bases
ATGGCCACTAATGCAGCGTCTCTCCGTCGACAGCATGGAATCGGTCGTGCATTCATATACGGCAGCCTGTTTTTCATGGC
TGCATTTTACCTGATGCCGCTCTGGGTGATGATCACCACTTCGGTGAAACATCTGGATGAGATCTATGCCGGCTCCTTTA
TTGGCCTGCCGACGCAAATCAGCTTCGACGCCTGGCGCAGCGCCTGGTCCGAAGCTTGCAACGGAACTGCCTGCAGGGGC
CTCAAACCTTACTTCATCAACTCGCTGCTGGTGACAGTCCCGGCGGTGTTCCTGTCGACCGGCATTGGCGCGATCAACGG
CTACGTGATCACCAAATGGCGGTTTCCCGGCTCAAACGTTATTTTCGGGCTGCTGTTGTTTGGCTGCTTCCTGCCGTTTC
AGGCGGTGATCCTTCCAATGGCGCAAACTTTGGGCATCCTTGGTCTCGCCGGGACGCTTCCGGGACTGGTGCTTGTCCAC
ACAGTCTACGGCATCGCGTTCACCACGCTCTTTTTCCGCAACTATTTTGTTGGCATTCCCGATGAACTTGTAAGGGCGGC
GCAAATCGACGGTGCCGGGTTCATTCGCATCTTTGTGTCGATCATGCTGCCAACGGCGCTGCCGATCATCGTCGTGTCCT
GCATCTGGCAGTTCACCCAGATCTGGAACGATTACCTGTTCGGGGCGTCTTTTACCGCCGGCGAAAATGCTCCCATCACC
GTAGCCCTCAACAACATCGTCAACGTCTCGATGGGACGCAAACAATACAACGTCGACATGGCCGCCGCCATGATCGCCGC
CCTGCCTACCCTCATCGTCTATGTCGTTGCGGGACGTTACTTCGTGCGCGGCCTAACGGCCGGCGCAGTAAAAGGTTGA

Upstream 100 bases:

>100_bases
GACCAGATGGGCGTTGGGGCGGCCAGCGCCATGATGATGCTGATGACAGTCGCGGCCATCATTGTTCCCTACCTCTATTC
AGAGCTGAAGGAGCCCCGCG

Downstream 100 bases:

>100_bases
TCCAAATGGCAACTCTCGAAATCGATCGCGTTCGAAAATCCTATGGCGCAGTTGACGTCCTGAAGGGAGTCAGCATTTCG
ATCACCGATGGCGACTTTCT

Product: ABC transporter (permease protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MATNAASLRRQHGIGRAFIYGSLFFMAAFYLMPLWVMITTSVKHLDEIYAGSFIGLPTQISFDAWRSAWSEACNGTACRG
LKPYFINSLLVTVPAVFLSTGIGAINGYVITKWRFPGSNVIFGLLLFGCFLPFQAVILPMAQTLGILGLAGTLPGLVLVH
TVYGIAFTTLFFRNYFVGIPDELVRAAQIDGAGFIRIFVSIMLPTALPIIVVSCIWQFTQIWNDYLFGASFTAGENAPIT
VALNNIVNVSMGRKQYNVDMAAAMIAALPTLIVYVVAGRYFVRGLTAGAVKG

Sequences:

>Translated_292_residues
MATNAASLRRQHGIGRAFIYGSLFFMAAFYLMPLWVMITTSVKHLDEIYAGSFIGLPTQISFDAWRSAWSEACNGTACRG
LKPYFINSLLVTVPAVFLSTGIGAINGYVITKWRFPGSNVIFGLLLFGCFLPFQAVILPMAQTLGILGLAGTLPGLVLVH
TVYGIAFTTLFFRNYFVGIPDELVRAAQIDGAGFIRIFVSIMLPTALPIIVVSCIWQFTQIWNDYLFGASFTAGENAPIT
VALNNIVNVSMGRKQYNVDMAAAMIAALPTLIVYVVAGRYFVRGLTAGAVKG
>Mature_291_residues
ATNAASLRRQHGIGRAFIYGSLFFMAAFYLMPLWVMITTSVKHLDEIYAGSFIGLPTQISFDAWRSAWSEACNGTACRGL
KPYFINSLLVTVPAVFLSTGIGAINGYVITKWRFPGSNVIFGLLLFGCFLPFQAVILPMAQTLGILGLAGTLPGLVLVHT
VYGIAFTTLFFRNYFVGIPDELVRAAQIDGAGFIRIFVSIMLPTALPIIVVSCIWQFTQIWNDYLFGASFTAGENAPITV
ALNNIVNVSMGRKQYNVDMAAAMIAALPTLIVYVVAGRYFVRGLTAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=300, Percent_Identity=28.6666666666667, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1789860, Length=259, Percent_Identity=25.8687258687259, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790464, Length=289, Percent_Identity=28.3737024221453, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31711; Mature: 31580

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATNAASLRRQHGIGRAFIYGSLFFMAAFYLMPLWVMITTSVKHLDEIYAGSFIGLPTQI
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
SFDAWRSAWSEACNGTACRGLKPYFINSLLVTVPAVFLSTGIGAINGYVITKWRFPGSNV
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCEEEEEEECCCCHH
IFGLLLFGCFLPFQAVILPMAQTLGILGLAGTLPGLVLVHTVYGIAFTTLFFRNYFVGIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DELVRAAQIDGAGFIRIFVSIMLPTALPIIVVSCIWQFTQIWNDYLFGASFTAGENAPIT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
VALNNIVNVSMGRKQYNVDMAAAMIAALPTLIVYVVAGRYFVRGLTAGAVKG
EEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]