| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475548
Identifier: 13475548
GI number: 13475548
Start: 5443767
End: 5444561
Strand: Reverse
Name: 13475548
Synonym: mll6647
Alternate gene names: NA
Gene position: 5444561-5443767 (Counterclockwise)
Preceding gene: 13475559
Following gene: 13475546
Centisome position: 77.38
GC content: 58.24
Gene sequence:
>795_bases ATGTCCGACGTCATCCTGCGAATTAATTCATCGATCCGCGCACTTCCGCCGGCTATGCCCGTGTGGCTTGTTGGTCTCAT GACAATTCATGCACCAGATACGATGATGAAGAACCAGGCCAGAGACCTATCGTTCGCCGACGACTTCATTTTCGCCATGC TCGTCGAGAACGTCGTCGAATATGACGTCGAGGACGCCGTCGTCGTCAACCTCGGGCCCTGGCCCATGATTACCGGCGAT GAGCATCCCGCGGTTGTCCCTGCCTGGAAATCCACCCAGCTGAAGGGCGGACGCATCAAATCGGCGGAGCGTGCAGCCAT TCTCAGGGTAAAGAATGCCGTCAATCTCGGCGGCTGCATGTTCCGCGGCTGGGACTGGCTCGGCAACCGCATCAAGAGTT TCCCGCGCGACACGCCGCTTTTCATTTCACCCCAGGACGAGATCGGCACGGTAACCACCGATCCCTATGTGTTCACCAAT GAGCGTCGCGCAGCGGAGGCACCGCAGACCTTCAGGCTGAAACTCAATCTATGGTGGTCGCCGGGCGATACGGACTGCTT CATCCACAATGAGCATCGGTTCCTGGAAACTCATACCCAGATCCACGGCAGCGGCCGCATGCAGAAGTTCCGGGAACGGG CGGCGTCCACGATCTATGAGGACGTGGTAATGCCGATCGGCTATTCGCACGATCCATTCTGCCGGGTGACGGGCGAAAAC CAATGGACCTATCCCTGGCATCGCTACTATGCCGATACGGATTCGGTCTGGCTGGCGATCGAACTGCATCCCTGA
Upstream 100 bases:
>100_bases AGGATAACGGGCTAACCGCATTCGACATCGACTATCGTGACACGCCGTGCCGACAGTAGGAGCACCGGGGCTCGACGGTC GAAGCGACGCAATATGACGC
Downstream 100 bases:
>100_bases GCGTCATTTCGGACCTTTTTGCGTCCGCCGAAGGCTACACGCCTCACATCTGGATCATATCCAGCCCGTCCCCCAGATAT TGCAGCGCCTCGCGGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVEYDVEDAVVVNLGPWPMITGD EHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCMFRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTN ERRAAEAPQTFRLKLNLWWSPGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN QWTYPWHRYYADTDSVWLAIELHP
Sequences:
>Translated_264_residues MSDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVEYDVEDAVVVNLGPWPMITGD EHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCMFRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTN ERRAAEAPQTFRLKLNLWWSPGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN QWTYPWHRYYADTDSVWLAIELHP >Mature_263_residues SDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVEYDVEDAVVVNLGPWPMITGDE HPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCMFRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTNE RRAAEAPQTFRLKLNLWWSPGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGENQ WTYPWHRYYADTDSVWLAIELHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30219; Mature: 30088
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00116 DNA_POLYMERASE_B
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVE CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH YDVEDAVVVNLGPWPMITGDEHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCM CCCCCEEEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHEEEEEECCCCCCCCEE FRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTNERRAAEAPQTFRLKLNLWWS EECHHHHHHHHHHCCCCCCEEECCCHHCCCEECCCEEEECCCCCCCCCCEEEEEEEEEEC PGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN CCCCEEEEECCCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC QWTYPWHRYYADTDSVWLAIELHP CCCCCHHEEECCCCCEEEEEEECC >Mature Secondary Structure SDVILRINSSIRALPPAMPVWLVGLMTIHAPDTMMKNQARDLSFADDFIFAMLVENVVE CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH YDVEDAVVVNLGPWPMITGDEHPAVVPAWKSTQLKGGRIKSAERAAILRVKNAVNLGGCM CCCCCEEEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHEEEEEECCCCCCCCEE FRGWDWLGNRIKSFPRDTPLFISPQDEIGTVTTDPYVFTNERRAAEAPQTFRLKLNLWWS EECHHHHHHHHHHCCCCCCEEECCCHHCCCEECCCEEEECCCCCCCCCCEEEEEEEEEEC PGDTDCFIHNEHRFLETHTQIHGSGRMQKFRERAASTIYEDVVMPIGYSHDPFCRVTGEN CCCCEEEEECCCEEEEHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC QWTYPWHRYYADTDSVWLAIELHP CCCCCHHEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA