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The map label for this gene is 13475527

Identifier: 13475527

GI number: 13475527

Start: 5423112

End: 5423807

Strand: Direct

Name: 13475527

Synonym: mlr6622

Alternate gene names: NA

Gene position: 5423112-5423807 (Clockwise)

Preceding gene: 13475523

Following gene: 13475536

Centisome position: 77.08

GC content: 64.8

Gene sequence:

>696_bases
GTGAGCCGCCTGCATACGGAAAACCATCTCATATCCCGCATTGGCTGGCTGCGCGCCGCCGTACTCGGCGCCAATGACGG
CATCGTGTCGACGGCCAGCCTGATCGTTGGCGTGGCTGCAGCCAATGCCGCCGCCTCCAACGTTCTGGTGGCCGGTATAG
CCGGGTTGGTAGCCGGCGCGATGTCGATGGCGGCGGGCGAATATGTGTCGGTCAGCTCACAGTCCGACACAGAGCGAGCC
GACCTTGACCGTGAGCGAAGGGAACTCGCGACACAGCCGAGCTTCGAGCGACAGGAACTTGCGGACATCTATGTCAAGCG
TGGCGTGGAGCCAAAGCTGGCCTTGCAGGTCGCCGACCAATTGATGGCGAAGGACGCGCTTGGCGCCCACGCGCGCGACG
AACTCGGCATTTCGGAGATGACAACGGCGCGGCCGATCCAGGCGGCACTGGCCTCGGCGGCCGCATTTTCGGTTGGAGCG
GCCATGCCATTGGCGATGGTGCTTGTTTCACCGGCCGCATGGCTCGCCGCAACGGTGTCTGTCGCCTCGCTCCTGTTCCT
GGCCGTGCTGGGCGCCATTGGGGCCAAAGCCGGCGGCGCCAATGTGTTGAGGGCAACTGTTCGCGTCACCTTTTGGGGCG
CGCTGGCAATGGCGCTGACCGCCAGCATTGGTGCCGTCGTAGGTACTGCCATCTGA

Upstream 100 bases:

>100_bases
GAGGTAGGAAGATGCTCTTAGCGAGGTAGCTGCCTATGACCGTTGCCAACGAGCCTGCCGGCCATTCCGGCACCCACATC
CTGAAGCATTGGGCGTTCGC

Downstream 100 bases:

>100_bases
CGGTCTCGCAACTTTGATCCCGGCCTATGCCGTGGGCAACTGTCCTCCCGCAGAGTAATATCGAGAGGGTTCGGCCCGAG
TTCTGCGGCGACACCAAAAA

Product: nodulin 21

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSRLHTENHLISRIGWLRAAVLGANDGIVSTASLIVGVAAANAAASNVLVAGIAGLVAGAMSMAAGEYVSVSSQSDTERA
DLDRERRELATQPSFERQELADIYVKRGVEPKLALQVADQLMAKDALGAHARDELGISEMTTARPIQAALASAAAFSVGA
AMPLAMVLVSPAAWLAATVSVASLLFLAVLGAIGAKAGGANVLRATVRVTFWGALAMALTASIGAVVGTAI

Sequences:

>Translated_231_residues
MSRLHTENHLISRIGWLRAAVLGANDGIVSTASLIVGVAAANAAASNVLVAGIAGLVAGAMSMAAGEYVSVSSQSDTERA
DLDRERRELATQPSFERQELADIYVKRGVEPKLALQVADQLMAKDALGAHARDELGISEMTTARPIQAALASAAAFSVGA
AMPLAMVLVSPAAWLAATVSVASLLFLAVLGAIGAKAGGANVLRATVRVTFWGALAMALTASIGAVVGTAI
>Mature_230_residues
SRLHTENHLISRIGWLRAAVLGANDGIVSTASLIVGVAAANAAASNVLVAGIAGLVAGAMSMAAGEYVSVSSQSDTERAD
LDRERRELATQPSFERQELADIYVKRGVEPKLALQVADQLMAKDALGAHARDELGISEMTTARPIQAALASAAAFSVGAA
MPLAMVLVSPAAWLAATVSVASLLFLAVLGAIGAKAGGANVLRATVRVTFWGALAMALTASIGAVVGTAI

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23459; Mature: 23328

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLHTENHLISRIGWLRAAVLGANDGIVSTASLIVGVAAANAAASNVLVAGIAGLVAGA
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSMAAGEYVSVSSQSDTERADLDRERRELATQPSFERQELADIYVKRGVEPKLALQVADQ
HHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LMAKDALGAHARDELGISEMTTARPIQAALASAAAFSVGAAMPLAMVLVSPAAWLAATVS
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VASLLFLAVLGAIGAKAGGANVLRATVRVTFWGALAMALTASIGAVVGTAI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRLHTENHLISRIGWLRAAVLGANDGIVSTASLIVGVAAANAAASNVLVAGIAGLVAGA
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSMAAGEYVSVSSQSDTERADLDRERRELATQPSFERQELADIYVKRGVEPKLALQVADQ
HHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LMAKDALGAHARDELGISEMTTARPIQAALASAAAFSVGAAMPLAMVLVSPAAWLAATVS
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VASLLFLAVLGAIGAKAGGANVLRATVRVTFWGALAMALTASIGAVVGTAI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA