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The map label for this gene is hmp [H]

Identifier: 13475524

GI number: 13475524

Start: 5419803

End: 5421314

Strand: Reverse

Name: hmp [H]

Synonym: mll6619

Alternate gene names: 13475524

Gene position: 5421314-5419803 (Counterclockwise)

Preceding gene: 13475525

Following gene: 13475520

Centisome position: 77.05

GC content: 60.32

Gene sequence:

>1512_bases
ATGATCAAGACCATCGACCGATTTCTCGATCACCTGACGATGTACAGGCTGGTCCTCTACTATCTGATGGCGCTGGTCGG
CGCGGCGTTCGTTCTCGGCTTCGTCAGGCTGGTGCCACATGACCCGATTGCACTTGCCTTCACGACGGCTTTGGCGTTGG
CGGCCTGCTGGATTACCAATAAGGTCTTTGCACGGATCTTCGCAGTCCCGGCCAACAAGGAGTCCGTCTACATCACCGCG
CTCATTCTGGCGCTTATCCTCGATCCGGTTGCGGTCACGGACATTAAGGGGATCGCGGCGGTGGCATTCGCGTCTGTCTG
GGCGATTTCATCCAAATTCATTCTCGCCATCGGCCGGAAGCACCTTTTCAACCCGGCTGCACTGGGCGTGGCGCTATCCG
CGCTGCTGCTCGACCAACCAGCCACCTGGTGGGTTGGTGGCAATCTGCCGTTGCTTCCACTCGTGCTCGTCGGCGGTATG
CTCATTGTCCGGAAACTGCGCCGGCTTTATCTAGTCTCGACCTTCGTTGTCGTGGCGCTGGCGACCATTTTGGCAACCAC
GGACCCATCGCAATACTGGACCGCGCTTGCCGAGACACTGGGTTCGTCGCCTCTGCTCTTCTTTGCCTTTGTGATGCTGA
CCGAGCCGCTGACCGCGCCGACGATGCGTTGGCCGCGTATCGCCTTCGCCGCCATCGTCGGCTTTCTGTTTGCTCCCAAC
ATCCATATCGGCTCGTTCTATTTCACGCCGGAACTGGCGCTGCTTGCCGGCAACCTGTTTGCCTATGCGGCAGGCCCCAA
GGGACGCTTCGTGCTGACTCTTGAACGCATTGAGCAATCGGCCGTCGACAGCTTTGACTTCGTCTTCCGGTCCCCGCGCA
AGCTCGCCTTTGAGGCCGGCCAGTATCTCGAATGGACGCTTGGCCTCGATCGTGCCGACAACCGTGGCAACCGCCGCTTT
TTCACGGTCGCCTCGGCGCCGACGGAGGAAACAGTCCGCCTCGGTGTCAAGTTCTATCCGCAATCGAGCGCCTTCAAGCG
CGAATTGATGACCATGAAGCCGGGCAGCACGATCCACGCCGCGCAACTGGCCGGCAACTTCACGCTGCCCGCCCGGCGTG
AAACCAAGATCGCGTTCCTGGCCGGAGGCATCGGCATCACGCCGTTCCGCTCGATGCTGCAATATCTCCTCGACCGCAAG
GAGCGGCGACCGATCGTCATCCTCTACGGAACCGAAGGCCAGCAGGACATCGCTTATCGCGAAGTGCTTGGTGCGGCCAG
ACAGGAACTTGGTATCAAGACGATACACGCTGTGGCTAGCGGTGGCGAGCGCGGGCAATATCCCGGATACATCGATGAGC
GCCTGATACGTCTGGCAATACCCGACTACCTCGAGCGCACTTTCTACATTTCCGGCCCGCAGGCGATGGTCAAGGCGCTG
CGCCAGAAGCTGCTGGCCATGGGCGTTCGCCGCCCGAAGATAAAGGTCGACTATTTCCCGGGTTTTGCCTGA

Upstream 100 bases:

>100_bases
GCATTCTCTTCATCGAGCAGACGCTAGGCCTTGAGGGCTATCTCGTCGACGCCAATGGCCGCGCTACGCCGACAACCGGG
TTCGGAGCCCTTTGCCTGCC

Downstream 100 bases:

>100_bases
AGCATGCTCAACTGTGTCGGGGCAAGGAAATGGTCACGACCAGACCCGGATCGGCGTTGGCCATGGCAAGGCGTCCACCA
TAGGCTTCGACGATATCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Flavohemoglobin; Hemoglobin-like protein; Nitric oxide dioxygenase; NO oxygenase; NOD [H]

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MIKTIDRFLDHLTMYRLVLYYLMALVGAAFVLGFVRLVPHDPIALAFTTALALAACWITNKVFARIFAVPANKESVYITA
LILALILDPVAVTDIKGIAAVAFASVWAISSKFILAIGRKHLFNPAALGVALSALLLDQPATWWVGGNLPLLPLVLVGGM
LIVRKLRRLYLVSTFVVVALATILATTDPSQYWTALAETLGSSPLLFFAFVMLTEPLTAPTMRWPRIAFAAIVGFLFAPN
IHIGSFYFTPELALLAGNLFAYAAGPKGRFVLTLERIEQSAVDSFDFVFRSPRKLAFEAGQYLEWTLGLDRADNRGNRRF
FTVASAPTEETVRLGVKFYPQSSAFKRELMTMKPGSTIHAAQLAGNFTLPARRETKIAFLAGGIGITPFRSMLQYLLDRK
ERRPIVILYGTEGQQDIAYREVLGAARQELGIKTIHAVASGGERGQYPGYIDERLIRLAIPDYLERTFYISGPQAMVKAL
RQKLLAMGVRRPKIKVDYFPGFA

Sequences:

>Translated_503_residues
MIKTIDRFLDHLTMYRLVLYYLMALVGAAFVLGFVRLVPHDPIALAFTTALALAACWITNKVFARIFAVPANKESVYITA
LILALILDPVAVTDIKGIAAVAFASVWAISSKFILAIGRKHLFNPAALGVALSALLLDQPATWWVGGNLPLLPLVLVGGM
LIVRKLRRLYLVSTFVVVALATILATTDPSQYWTALAETLGSSPLLFFAFVMLTEPLTAPTMRWPRIAFAAIVGFLFAPN
IHIGSFYFTPELALLAGNLFAYAAGPKGRFVLTLERIEQSAVDSFDFVFRSPRKLAFEAGQYLEWTLGLDRADNRGNRRF
FTVASAPTEETVRLGVKFYPQSSAFKRELMTMKPGSTIHAAQLAGNFTLPARRETKIAFLAGGIGITPFRSMLQYLLDRK
ERRPIVILYGTEGQQDIAYREVLGAARQELGIKTIHAVASGGERGQYPGYIDERLIRLAIPDYLERTFYISGPQAMVKAL
RQKLLAMGVRRPKIKVDYFPGFA
>Mature_503_residues
MIKTIDRFLDHLTMYRLVLYYLMALVGAAFVLGFVRLVPHDPIALAFTTALALAACWITNKVFARIFAVPANKESVYITA
LILALILDPVAVTDIKGIAAVAFASVWAISSKFILAIGRKHLFNPAALGVALSALLLDQPATWWVGGNLPLLPLVLVGGM
LIVRKLRRLYLVSTFVVVALATILATTDPSQYWTALAETLGSSPLLFFAFVMLTEPLTAPTMRWPRIAFAAIVGFLFAPN
IHIGSFYFTPELALLAGNLFAYAAGPKGRFVLTLERIEQSAVDSFDFVFRSPRKLAFEAGQYLEWTLGLDRADNRGNRRF
FTVASAPTEETVRLGVKFYPQSSAFKRELMTMKPGSTIHAAQLAGNFTLPARRETKIAFLAGGIGITPFRSMLQYLLDRK
ERRPIVILYGTEGQQDIAYREVLGAARQELGIKTIHAVASGGERGQYPGYIDERLIRLAIPDYLERTFYISGPQAMVKAL
RQKLLAMGVRRPKIKVDYFPGFA

Specific function: Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a centra

COG id: COG1805

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR000971
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00042 Globin; PF00175 NAD_binding_1 [H]

EC number: =1.14.12.17 [H]

Molecular weight: Translated: 55632; Mature: 55632

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTIDRFLDHLTMYRLVLYYLMALVGAAFVLGFVRLVPHDPIALAFTTALALAACWITN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KVFARIFAVPANKESVYITALILALILDPVAVTDIKGIAAVAFASVWAISSKFILAIGRK
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLFNPAALGVALSALLLDQPATWWVGGNLPLLPLVLVGGMLIVRKLRRLYLVSTFVVVAL
HCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATILATTDPSQYWTALAETLGSSPLLFFAFVMLTEPLTAPTMRWPRIAFAAIVGFLFAPN
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
IHIGSFYFTPELALLAGNLFAYAAGPKGRFVLTLERIEQSAVDSFDFVFRSPRKLAFEAG
CEECEEEECCHHHHHHCCHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCC
QYLEWTLGLDRADNRGNRRFFTVASAPTEETVRLGVKFYPQSSAFKRELMTMKPGSTIHA
CEEEEEECCCCCCCCCCEEEEEEECCCCHHHHEECEEECCCCHHHHHHHHHCCCCCCEEH
AQLAGNFTLPARRETKIAFLAGGIGITPFRSMLQYLLDRKERRPIVILYGTEGQQDIAYR
HHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
EVLGAARQELGIKTIHAVASGGERGQYPGYIDERLIRLAIPDYLERTFYISGPQAMVKAL
HHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHCEEECCHHHHHHHH
RQKLLAMGVRRPKIKVDYFPGFA
HHHHHHHCCCCCCEEEECCCCCC
>Mature Secondary Structure
MIKTIDRFLDHLTMYRLVLYYLMALVGAAFVLGFVRLVPHDPIALAFTTALALAACWITN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KVFARIFAVPANKESVYITALILALILDPVAVTDIKGIAAVAFASVWAISSKFILAIGRK
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLFNPAALGVALSALLLDQPATWWVGGNLPLLPLVLVGGMLIVRKLRRLYLVSTFVVVAL
HCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATILATTDPSQYWTALAETLGSSPLLFFAFVMLTEPLTAPTMRWPRIAFAAIVGFLFAPN
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
IHIGSFYFTPELALLAGNLFAYAAGPKGRFVLTLERIEQSAVDSFDFVFRSPRKLAFEAG
CEECEEEECCHHHHHHCCHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCC
QYLEWTLGLDRADNRGNRRFFTVASAPTEETVRLGVKFYPQSSAFKRELMTMKPGSTIHA
CEEEEEECCCCCCCCCCEEEEEEECCCCHHHHEECEEECCCCHHHHHHHHHCCCCCCEEH
AQLAGNFTLPARRETKIAFLAGGIGITPFRSMLQYLLDRKERRPIVILYGTEGQQDIAYR
HHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
EVLGAARQELGIKTIHAVASGGERGQYPGYIDERLIRLAIPDYLERTFYISGPQAMVKAL
HHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHCEEECCHHHHHHHH
RQKLLAMGVRRPKIKVDYFPGFA
HHHHHHHCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]