Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475519

Identifier: 13475519

GI number: 13475519

Start: 5416502

End: 5417050

Strand: Reverse

Name: 13475519

Synonym: mll6613

Alternate gene names: NA

Gene position: 5417050-5416502 (Counterclockwise)

Preceding gene: 13475520

Following gene: 13475518

Centisome position: 76.99

GC content: 55.19

Gene sequence:

>549_bases
ATGTCGTGGGCCAAGGCTCGCTGCAAAGCCGGCAAATTATCAAAGTCCTCAAAGTCCCTTGCCAATTTCCGGAGAGTTTT
CGTGATCCCCATTCAACATATCCATCCCATGCTTGTTCATTTTCCTATTGTTCTGATCTACCTGCTCGTGGCTATCGACC
TTATGGCGCTCGTTGGCGGCAGCGCCGTCACGAGGAGATCGGGTGCCGGTACGATCTCTACTTTTGTGGCCCTGGCTGCC
GGAATGTTCGCTATGGGGACCTGGTTCTTCGGAGGTCTTGCGCTGGATCATGCCGAAGCGGCCGGATTCAGCAGCGATGT
CGCGGAGATCCATGAAAGCCTCGGAGGTATCACTGCCTTTGCTTTTCTGATCTGGGGACTTGTGAGGCTCACGCTTTGGA
TACGGAATCGCGAGTTTCGGGCTGTGACCATCGCCATTCCTCTGATCGAAGTTTGCGGAGCCTTTCTGGTCACTGCGACG
GCCTACTATGGCGGACTGCTTGTCTACGAACATGGGGTGAACGTTGCCAAGACCGCGATCGCGGGTTGA

Upstream 100 bases:

>100_bases
CGAAGATGCGTGTGACGACCAGCAAGGCGATGAGGCCGACGAAAACGACTAGGTCATCTCTTCGCTGTGCGTGGCCCGCC
ACAGCACATAACGCTTGCCA

Downstream 100 bases:

>100_bases
CCGGTTCGCGCCCCGTCACTCACGGCTCCAGCTTTGGACCATTTGCCTCGACCGAAAAATGATTTAGATCAAGGCGCTTC
GTGCATGTGAAATCTAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSWAKARCKAGKLSKSSKSLANFRRVFVIPIQHIHPMLVHFPIVLIYLLVAIDLMALVGGSAVTRRSGAGTISTFVALAA
GMFAMGTWFFGGLALDHAEAAGFSSDVAEIHESLGGITAFAFLIWGLVRLTLWIRNREFRAVTIAIPLIEVCGAFLVTAT
AYYGGLLVYEHGVNVAKTAIAG

Sequences:

>Translated_182_residues
MSWAKARCKAGKLSKSSKSLANFRRVFVIPIQHIHPMLVHFPIVLIYLLVAIDLMALVGGSAVTRRSGAGTISTFVALAA
GMFAMGTWFFGGLALDHAEAAGFSSDVAEIHESLGGITAFAFLIWGLVRLTLWIRNREFRAVTIAIPLIEVCGAFLVTAT
AYYGGLLVYEHGVNVAKTAIAG
>Mature_181_residues
SWAKARCKAGKLSKSSKSLANFRRVFVIPIQHIHPMLVHFPIVLIYLLVAIDLMALVGGSAVTRRSGAGTISTFVALAAG
MFAMGTWFFGGLALDHAEAAGFSSDVAEIHESLGGITAFAFLIWGLVRLTLWIRNREFRAVTIAIPLIEVCGAFLVTATA
YYGGLLVYEHGVNVAKTAIAG

Specific function: Unknown

COG id: COG4244

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19482; Mature: 19351

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWAKARCKAGKLSKSSKSLANFRRVFVIPIQHIHPMLVHFPIVLIYLLVAIDLMALVGG
CCCHHHHHHCCCCCCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAVTRRSGAGTISTFVALAAGMFAMGTWFFGGLALDHAEAAGFSSDVAEIHESLGGITAF
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AFLIWGLVRLTLWIRNREFRAVTIAIPLIEVCGAFLVTATAYYGGLLVYEHGVNVAKTAI
HHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHC
AG
CC
>Mature Secondary Structure 
SWAKARCKAGKLSKSSKSLANFRRVFVIPIQHIHPMLVHFPIVLIYLLVAIDLMALVGG
CCHHHHHHCCCCCCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAVTRRSGAGTISTFVALAAGMFAMGTWFFGGLALDHAEAAGFSSDVAEIHESLGGITAF
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AFLIWGLVRLTLWIRNREFRAVTIAIPLIEVCGAFLVTATAYYGGLLVYEHGVNVAKTAI
HHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA