| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475511
Identifier: 13475511
GI number: 13475511
Start: 5407568
End: 5407993
Strand: Direct
Name: 13475511
Synonym: mlr6601
Alternate gene names: NA
Gene position: 5407568-5407993 (Clockwise)
Preceding gene: 13475506
Following gene: 13475512
Centisome position: 76.85
GC content: 58.22
Gene sequence:
>426_bases ATGGCATTAGCGTTGCGGCATCTCGCAACGGAGCAGTCGATCATGCACAGCTATCCAGGACCGCCGCGATCCGGCACACA GCCGCTGCCAATGGCGGAAAATGGCCAGAAGGTGGTTCTTACCGCCGTGTCACTTCAGGCGCACGCCTTCAAGGCGATGA TGCGCTATCAGGTCGAAACGCTTACCTTTCTGAGGCATCGTTGCGAGCAGGATATCAAGCTGGCGGACGATCTCATCGGC GGCCCTGAATTCAATGATGCCTTCGAGGTCGTCTCCACCTTCCTGGAGAATGCGGTCTCGGAATATGTCACCGAAGCCGG CAAGGTTGCGACACTGACGTCCAAGCTTGCTTCGGAAGCGGCCGGGCTGGTGCGCAAGGAAGCCAGAACCGCGATTGAAG ACATAGCGGCGAAGACAGTCGCTTGA
Upstream 100 bases:
>100_bases ATGCAGCGATCGGCTGCGCAGCACAGAATGCGTCACGCCGCCAAGGTCTTTTCACGGACACGGCTGTGGGGATTGATCCT GATCAACGACCCCGAGGCGA
Downstream 100 bases:
>100_bases TCGGAAACGCGGAGGCTTGCAGCCATGAACACCCGTATGGACAATGGCAGCCGCAGATATAACGCGCGGCTTTCAGTGTT GGCGGCGGTTTTGCTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MALALRHLATEQSIMHSYPGPPRSGTQPLPMAENGQKVVLTAVSLQAHAFKAMMRYQVETLTFLRHRCEQDIKLADDLIG GPEFNDAFEVVSTFLENAVSEYVTEAGKVATLTSKLASEAAGLVRKEARTAIEDIAAKTVA
Sequences:
>Translated_141_residues MALALRHLATEQSIMHSYPGPPRSGTQPLPMAENGQKVVLTAVSLQAHAFKAMMRYQVETLTFLRHRCEQDIKLADDLIG GPEFNDAFEVVSTFLENAVSEYVTEAGKVATLTSKLASEAAGLVRKEARTAIEDIAAKTVA >Mature_140_residues ALALRHLATEQSIMHSYPGPPRSGTQPLPMAENGQKVVLTAVSLQAHAFKAMMRYQVETLTFLRHRCEQDIKLADDLIGG PEFNDAFEVVSTFLENAVSEYVTEAGKVATLTSKLASEAAGLVRKEARTAIEDIAAKTVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15302; Mature: 15170
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALALRHLATEQSIMHSYPGPPRSGTQPLPMAENGQKVVLTAVSLQAHAFKAMMRYQVET CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH LTFLRHRCEQDIKLADDLIGGPEFNDAFEVVSTFLENAVSEYVTEAGKVATLTSKLASEA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AGLVRKEARTAIEDIAAKTVA HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALALRHLATEQSIMHSYPGPPRSGTQPLPMAENGQKVVLTAVSLQAHAFKAMMRYQVET CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH LTFLRHRCEQDIKLADDLIGGPEFNDAFEVVSTFLENAVSEYVTEAGKVATLTSKLASEA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AGLVRKEARTAIEDIAAKTVA HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA