Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475509

Identifier: 13475509

GI number: 13475509

Start: 5405536

End: 5405970

Strand: Reverse

Name: 13475509

Synonym: mll6598

Alternate gene names: NA

Gene position: 5405970-5405536 (Counterclockwise)

Preceding gene: 13475510

Following gene: 13475508

Centisome position: 76.83

GC content: 58.39

Gene sequence:

>435_bases
ATGAGCCACATGTCCCACACCTCTTTTTCCGGCTTCACCCACGCTGCGCAGCAGGCACAGCAGTGGGTAAAAGAGCTCGC
CGCTGATCTCCGCTGGAGCGAGCCAAGTGCATGCCGGCTTCTAAGGTCCGTTCTGCACGCGATGCGAGATTGGTTGCCGC
CGGCGGAAACGGCCGATTTCTCGGCGCAACTGCCCGTTTTGATTCGTGGCATATACTTCGAGGGCTGGGACCCATCGGCG
CCTGAGCATGAGCGCAAGAAGCGTGATTTTGTCCTCAGCGTCAGGAACAGCTTCGGCTACGATGACGACGTCGATTTCGA
CGTCGCCATCAGCGCGGTGTTCAAGCTGCTCGATCGCCATATATCGCATGGTGAGATCACCCAGGTGAGAAACTCGATGA
AGAAGTCCCTTCGCGAACTCTGGCCGGCGGATTGA

Upstream 100 bases:

>100_bases
GATCGTTCCGCTGATCATGGCGAAGGCCGGAGGCTGAAGCCGCCATGTGCTCAATCGTCTTCATCCATTTCGGCTTCCTC
TGAATTTTAGGGGTAGAACC

Downstream 100 bases:

>100_bases
ACAATGTTTCGCGACCGCAAGCAGGCAGGAGAGAAACTCGGCATCGAATTGGCCGGGCTCGATCTTTGCCGGCCGGTCGT
TCTGGCACTGCCGCGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSHMSHTSFSGFTHAAQQAQQWVKELAADLRWSEPSACRLLRSVLHAMRDWLPPAETADFSAQLPVLIRGIYFEGWDPSA
PEHERKKRDFVLSVRNSFGYDDDVDFDVAISAVFKLLDRHISHGEITQVRNSMKKSLRELWPAD

Sequences:

>Translated_144_residues
MSHMSHTSFSGFTHAAQQAQQWVKELAADLRWSEPSACRLLRSVLHAMRDWLPPAETADFSAQLPVLIRGIYFEGWDPSA
PEHERKKRDFVLSVRNSFGYDDDVDFDVAISAVFKLLDRHISHGEITQVRNSMKKSLRELWPAD
>Mature_143_residues
SHMSHTSFSGFTHAAQQAQQWVKELAADLRWSEPSACRLLRSVLHAMRDWLPPAETADFSAQLPVLIRGIYFEGWDPSAP
EHERKKRDFVLSVRNSFGYDDDVDFDVAISAVFKLLDRHISHGEITQVRNSMKKSLRELWPAD

Specific function: Unknown

COG id: COG5502

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16539; Mature: 16408

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHMSHTSFSGFTHAAQQAQQWVKELAADLRWSEPSACRLLRSVLHAMRDWLPPAETADF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
SAQLPVLIRGIYFEGWDPSAPEHERKKRDFVLSVRNSFGYDDDVDFDVAISAVFKLLDRH
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ISHGEITQVRNSMKKSLRELWPAD
CCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SHMSHTSFSGFTHAAQQAQQWVKELAADLRWSEPSACRLLRSVLHAMRDWLPPAETADF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
SAQLPVLIRGIYFEGWDPSAPEHERKKRDFVLSVRNSFGYDDDVDFDVAISAVFKLLDRH
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ISHGEITQVRNSMKKSLRELWPAD
CCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA