| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475474
Identifier: 13475474
GI number: 13475474
Start: 5360868
End: 5362004
Strand: Direct
Name: 13475474
Synonym: mlr6556
Alternate gene names: NA
Gene position: 5360868-5362004 (Clockwise)
Preceding gene: 13475473
Following gene: 13475475
Centisome position: 76.19
GC content: 65.17
Gene sequence:
>1137_bases GTGGGCGCTCGCGGCCTCGGAGGGCAACATCCAGCGCAAGACGGTGCGCATTCGGCTGCAGAGCGAAGCCGGCGAACCAT CCTGGGCATGGCAGCTCGACTGGGCGATCCCGGTCAAGTGGGCTGCCTCGGACCTCGATGCAAACTCTTCGCAGATAGTG GTGGAGAGTCTCGAACTCGCGCATCACGGATTGAGGAGAGCAGCATGAAGCTGGCCAACCAGCCCCTCTTGCGACTGCGC TCCCGTGTTGCTCGGCCCGCCACGAGGCAGAGGCGGCGATGGACGGCAATCACGCTGCGCTGGCGGTCGGCCGGGAGGCG ACTGCCAAGGCCAAGCACGCGTCCGCCATCACCAAGCATATCGCACTACTGGGTGACGCAGTTCAATCTGCATTTCGGCG GTGCGCATCCGACAGTTGATCATCTACGCCCGGTGTCAGCCGCACCTATGCAAATGACCCGGTTGTATTGGTGTCGCACC ACCGAGCGCACGCCAGGAACGACAACAACGGTCCGCCAAATTATCGATCGCGAAAGACGCCGGTTCACGGGTACTTCCGA GACGAATGTGGTGCTGCGCTTCAGTGCCATTCGTGGGAAACAGGTAGCTAGGACCTTCCCGGAGGTGAGCCGGGTGGTAC CACGAACCCGGCTGCCGAAAACGCCGGGCGCCGGCATGTTGCAGGCGACGATTGAGTTAGCACACGAGCGCCGCCGTTTT AGGCTCAGCGAGCGCGGCGCGCTGTCTGCGGCGAGGCGTCTAGCGAGCCGGGCGGCTGCCGCGACAGTGCAGGTCCGGTG GGCTGGCGAGACGCCGCGCGGGTTAGCCAGCATAAGGCCAAGGCGCCAAGCGCCGCCGCAGGCACCGGCATTGCACGCCG GGCGGGACCTGGTCTGGCGGATACAGGAACGGGATCGCGTGCTGGAGCCGGACAAATTCGCCCCAGCACGCGCCGCGGCG ACCCCAGCGAATGTTCAGACCATGGGCACCGCAATGGCCGCTGCCTTGCCAGCGCAGGCAGCCGCCTTGCAGCGTCAGCA GGCACTTGATCCGGCAATCGTCGAAAGGCTCACCGACGACGTAATCAATCGCGTGGAGCGGCGCCTTCGCATCGAACGCG AGCGAAGGGGATTGTGA
Upstream 100 bases:
>100_bases GCGAGGGCGGCGTCAATGAGTATGAGCACAAGCTGTTCTCGCAGGTATCCTACCCGTCGGTCGTGCTCGAGCGCGGCCTT GCGCACGAGGATCTCTGGCG
Downstream 100 bases:
>100_bases GGCGCAATGTCCAAGTCACAACTTGAGAAGGCTATCATCACCGTCCTCGACGGTGCCGACAAGGGCAAGGTCATAACCGT CCTTTTCAATCCAGCTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MGARGLGGQHPAQDGAHSAAERSRRTILGMAARLGDPGQVGCLGPRCKLFADSGGESRTRASRIEESSMKLANQPLLRLR SRVARPATRQRRRWTAITLRWRSAGRRLPRPSTRPPSPSISHYWVTQFNLHFGGAHPTVDHLRPVSAAPMQMTRLYWCRT TERTPGTTTTVRQIIDRERRRFTGTSETNVVLRFSAIRGKQVARTFPEVSRVVPRTRLPKTPGAGMLQATIELAHERRRF RLSERGALSAARRLASRAAAATVQVRWAGETPRGLASIRPRRQAPPQAPALHAGRDLVWRIQERDRVLEPDKFAPARAAA TPANVQTMGTAMAAALPAQAAALQRQQALDPAIVERLTDDVINRVERRLRIERERRGL
Sequences:
>Translated_378_residues MGARGLGGQHPAQDGAHSAAERSRRTILGMAARLGDPGQVGCLGPRCKLFADSGGESRTRASRIEESSMKLANQPLLRLR SRVARPATRQRRRWTAITLRWRSAGRRLPRPSTRPPSPSISHYWVTQFNLHFGGAHPTVDHLRPVSAAPMQMTRLYWCRT TERTPGTTTTVRQIIDRERRRFTGTSETNVVLRFSAIRGKQVARTFPEVSRVVPRTRLPKTPGAGMLQATIELAHERRRF RLSERGALSAARRLASRAAAATVQVRWAGETPRGLASIRPRRQAPPQAPALHAGRDLVWRIQERDRVLEPDKFAPARAAA TPANVQTMGTAMAAALPAQAAALQRQQALDPAIVERLTDDVINRVERRLRIERERRGL >Mature_377_residues GARGLGGQHPAQDGAHSAAERSRRTILGMAARLGDPGQVGCLGPRCKLFADSGGESRTRASRIEESSMKLANQPLLRLRS RVARPATRQRRRWTAITLRWRSAGRRLPRPSTRPPSPSISHYWVTQFNLHFGGAHPTVDHLRPVSAAPMQMTRLYWCRTT ERTPGTTTTVRQIIDRERRRFTGTSETNVVLRFSAIRGKQVARTFPEVSRVVPRTRLPKTPGAGMLQATIELAHERRRFR LSERGALSAARRLASRAAAATVQVRWAGETPRGLASIRPRRQAPPQAPALHAGRDLVWRIQERDRVLEPDKFAPARAAAT PANVQTMGTAMAAALPAQAAALQRQQALDPAIVERLTDDVINRVERRLRIERERRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42105; Mature: 41974
Theoretical pI: Translated: 12.44; Mature: 12.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARGLGGQHPAQDGAHSAAERSRRTILGMAARLGDPGQVGCLGPRCKLFADSGGESRTR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHH ASRIEESSMKLANQPLLRLRSRVARPATRQRRRWTAITLRWRSAGRRLPRPSTRPPSPSI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEEEEEEEEHHCCCCCCCCCCCCCCCCC SHYWVTQFNLHFGGAHPTVDHLRPVSAAPMQMTRLYWCRTTERTPGTTTTVRQIIDRERR CEEEEEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH RFTGTSETNVVLRFSAIRGKQVARTFPEVSRVVPRTRLPKTPGAGMLQATIELAHERRRF HCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH RLSERGALSAARRLASRAAAATVQVRWAGETPRGLASIRPRRQAPPQAPALHAGRDLVWR HHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCHHEEE IQERDRVLEPDKFAPARAAATPANVQTMGTAMAAALPAQAAALQRQQALDPAIVERLTDD EHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VINRVERRLRIERERRGL HHHHHHHHHHHHHHHCCC >Mature Secondary Structure GARGLGGQHPAQDGAHSAAERSRRTILGMAARLGDPGQVGCLGPRCKLFADSGGESRTR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHH ASRIEESSMKLANQPLLRLRSRVARPATRQRRRWTAITLRWRSAGRRLPRPSTRPPSPSI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCEEEEEEEEHHCCCCCCCCCCCCCCCCC SHYWVTQFNLHFGGAHPTVDHLRPVSAAPMQMTRLYWCRTTERTPGTTTTVRQIIDRERR CEEEEEEEEEEECCCCCCHHHCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHH RFTGTSETNVVLRFSAIRGKQVARTFPEVSRVVPRTRLPKTPGAGMLQATIELAHERRRF HCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH RLSERGALSAARRLASRAAAATVQVRWAGETPRGLASIRPRRQAPPQAPALHAGRDLVWR HHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCHHEEE IQERDRVLEPDKFAPARAAATPANVQTMGTAMAAALPAQAAALQRQQALDPAIVERLTDD EHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VINRVERRLRIERERRGL HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA