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The map label for this gene is 13475454

Identifier: 13475454

GI number: 13475454

Start: 5334566

End: 5336110

Strand: Direct

Name: 13475454

Synonym: mlr6529

Alternate gene names: NA

Gene position: 5334566-5336110 (Clockwise)

Preceding gene: 13475450

Following gene: 13475455

Centisome position: 75.82

GC content: 66.54

Gene sequence:

>1545_bases
TTGACAGAGGGTTGCTGTAAATCTGTCACAACTGTAAAAATCACCGGTAGTGGGATCTGCCGCGAATGTCGTGTAAATTC
CTGTCAAGAAAAGTCGATGGCTGAGCAGAAGATTTTCGCCGGGCCGCGCATCCGCCGCATCCGCAACGCCAAGGGCCTGA
CGCAGACGGCGATGGCCGAGGGGCTCGGCATTTCGCCATCCTATCTCAATCTGATCGAGCGCAACCAGCGGCCGCTGACG
GTGCAGCTGATCCTCAAACTGGCGTCGGTCTACAAGGTCGACCCGCATGAGCTGCAGGGCGAGGCGAGAGGGTCGGTCGC
CGCCTTGAAGGAAGTGTTCACCGATCCGCTGCTGGTCGGCGAATTGCCGGGAGACCAGGAGTTGATCGAACTTGCCGAGG
CGGCGCCCAATGCGTCCGCGGCGGTGATAAAACTGTTTCGCGCCTACCGCGAGCAGGCCGAGCGACTGTCCGACCTCAAC
GAGCTCCTGGCGCGCGAGGGGCGGGCGACCGCACTGTCTGGCGCCCGCCTGCCGATCGACGAGGTGCATGAGACCTTCGA
ACGGCGGCCAAACCATTTTACGGCACTTGAGGAGGAGGCCGAGGCGTTCACCGCGGTGCTCGATCCCGGCGACGATCTGT
TCGGTGCTTTGAAGGCCTGGCTGAAGCGTGAATACGGCATCGCGGTCAAGGTGCTGCCGGTCGCCACCATGCCGAACTGG
CGCCGCCGCTATGACCGCCATTCGCAGCGCCTGTTCCTGTCCGAGCGCCTGTCGCCGTTCGACCAGCTGCGCGAGGTGGC
GATGGAGGCTTGCCTGATCCGCATGACGGTCACGGTCGCCGGCGAGATCCAGGCGCTCAAGCTGACCACGGACGAGGCTC
GCCGCCTCGCCCGCTTCGAGCTCGGCCGCTATGCCGCGCATGCGCTGATGATGCCCTACCAGGCCTTTCACGCCGCCGCC
GTCCGCGCCCGCTACGACATCGACGTGCTACGCTCACGCTTCGGCGTCTCCTTCGAGCAGGCGGCGAACCGGCTGACCAT
GCTGCAGCGGCAGGGCGCACTCGGCGTGCCCTTCTTCATGCTGGAGGTCGACAATGCTGGAAACCGCTTTCGCAGGGCCG
GCAGCCAGGGCTTTCCGCACAGCCGCTTTGGCGGCGGCTGTCCCAAGCTGCCCGTGCATGCCGCCTTCACCCAGCCGGGT
CAGGTTTTCGTCGAAGCGGTGGAAATGCCTGACGGCGCCGAGTTCCTGTGCATCGCCCGCACGCTGGAAGGGCCGCAGGG
CGCGTTCGCGGAGCGCCCGCGCCGCACGGCGCTGCTGCTTGGTTGCGACATCGGCTTTCGCGACGACATCGTCTATGGCG
CGGCGCTGCCCGGCGCCGTGGTCGGCGCAAGGGCTGGACAAGGCGCCGTCGCGGCGACGCCGGTCGGACCCGCCTGCCGG
CTTTGCGAGCGCGTCGGCTGCCTGGCGCGCGCCGAACCGCCGGTGACGCGTCCGCTTGGCCTCGACGAGATGGTGACCGG
CCTGAGCGCTTTCGACTTCCAGTAA

Upstream 100 bases:

>100_bases
TTCTGGCACATCGGGATGTGACTGAATTTACATTACGGCGCGAAATCAGCCAGAAAAATCAGGCTATGTGGCCGAGGATA
AGGGAAAACCTGTGTTGTGT

Downstream 100 bases:

>100_bases
TGCGAGAGCAAAGGTGCCACAATCGTCGCCGGTGTCTGGATCACCCGCGGCGTAACTCTTTGCGTTACGCGAACAGAGCA
GTTTTTTGTCGTCCCTTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MTEGCCKSVTTVKITGSGICRECRVNSCQEKSMAEQKIFAGPRIRRIRNAKGLTQTAMAEGLGISPSYLNLIERNQRPLT
VQLILKLASVYKVDPHELQGEARGSVAALKEVFTDPLLVGELPGDQELIELAEAAPNASAAVIKLFRAYREQAERLSDLN
ELLAREGRATALSGARLPIDEVHETFERRPNHFTALEEEAEAFTAVLDPGDDLFGALKAWLKREYGIAVKVLPVATMPNW
RRRYDRHSQRLFLSERLSPFDQLREVAMEACLIRMTVTVAGEIQALKLTTDEARRLARFELGRYAAHALMMPYQAFHAAA
VRARYDIDVLRSRFGVSFEQAANRLTMLQRQGALGVPFFMLEVDNAGNRFRRAGSQGFPHSRFGGGCPKLPVHAAFTQPG
QVFVEAVEMPDGAEFLCIARTLEGPQGAFAERPRRTALLLGCDIGFRDDIVYGAALPGAVVGARAGQGAVAATPVGPACR
LCERVGCLARAEPPVTRPLGLDEMVTGLSAFDFQ

Sequences:

>Translated_514_residues
MTEGCCKSVTTVKITGSGICRECRVNSCQEKSMAEQKIFAGPRIRRIRNAKGLTQTAMAEGLGISPSYLNLIERNQRPLT
VQLILKLASVYKVDPHELQGEARGSVAALKEVFTDPLLVGELPGDQELIELAEAAPNASAAVIKLFRAYREQAERLSDLN
ELLAREGRATALSGARLPIDEVHETFERRPNHFTALEEEAEAFTAVLDPGDDLFGALKAWLKREYGIAVKVLPVATMPNW
RRRYDRHSQRLFLSERLSPFDQLREVAMEACLIRMTVTVAGEIQALKLTTDEARRLARFELGRYAAHALMMPYQAFHAAA
VRARYDIDVLRSRFGVSFEQAANRLTMLQRQGALGVPFFMLEVDNAGNRFRRAGSQGFPHSRFGGGCPKLPVHAAFTQPG
QVFVEAVEMPDGAEFLCIARTLEGPQGAFAERPRRTALLLGCDIGFRDDIVYGAALPGAVVGARAGQGAVAATPVGPACR
LCERVGCLARAEPPVTRPLGLDEMVTGLSAFDFQ
>Mature_513_residues
TEGCCKSVTTVKITGSGICRECRVNSCQEKSMAEQKIFAGPRIRRIRNAKGLTQTAMAEGLGISPSYLNLIERNQRPLTV
QLILKLASVYKVDPHELQGEARGSVAALKEVFTDPLLVGELPGDQELIELAEAAPNASAAVIKLFRAYREQAERLSDLNE
LLAREGRATALSGARLPIDEVHETFERRPNHFTALEEEAEAFTAVLDPGDDLFGALKAWLKREYGIAVKVLPVATMPNWR
RRYDRHSQRLFLSERLSPFDQLREVAMEACLIRMTVTVAGEIQALKLTTDEARRLARFELGRYAAHALMMPYQAFHAAAV
RARYDIDVLRSRFGVSFEQAANRLTMLQRQGALGVPFFMLEVDNAGNRFRRAGSQGFPHSRFGGGCPKLPVHAAFTQPGQ
VFVEAVEMPDGAEFLCIARTLEGPQGAFAERPRRTALLLGCDIGFRDDIVYGAALPGAVVGARAGQGAVAATPVGPACRL
CERVGCLARAEPPVTRPLGLDEMVTGLSAFDFQ

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 56354; Mature: 56222

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGCCKSVTTVKITGSGICRECRVNSCQEKSMAEQKIFAGPRIRRIRNAKGLTQTAMAE
CCCCHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHH
GLGISPSYLNLIERNQRPLTVQLILKLASVYKVDPHELQGEARGSVAALKEVFTDPLLVG
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCEEEE
ELPGDQELIELAEAAPNASAAVIKLFRAYREQAERLSDLNELLAREGRATALSGARLPID
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
EVHETFERRPNHFTALEEEAEAFTAVLDPGDDLFGALKAWLKREYGIAVKVLPVATMPNW
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHH
RRRYDRHSQRLFLSERLSPFDQLREVAMEACLIRMTVTVAGEIQALKLTTDEARRLARFE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCEEEEEECHHHHHHHHHHH
LGRYAAHALMMPYQAFHAAAVRARYDIDVLRSRFGVSFEQAANRLTMLQRQGALGVPFFM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE
LEVDNAGNRFRRAGSQGFPHSRFGGGCPKLPVHAAFTQPGQVFVEAVEMPDGAEFLCIAR
EEECCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEE
TLEGPQGAFAERPRRTALLLGCDIGFRDDIVYGAALPGAVVGARAGQGAVAATPVGPACR
CCCCCCCCHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCCEEECCCCHHHH
LCERVGCLARAEPPVTRPLGLDEMVTGLSAFDFQ
HHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHCCC
>Mature Secondary Structure 
TEGCCKSVTTVKITGSGICRECRVNSCQEKSMAEQKIFAGPRIRRIRNAKGLTQTAMAE
CCCHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHH
GLGISPSYLNLIERNQRPLTVQLILKLASVYKVDPHELQGEARGSVAALKEVFTDPLLVG
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCEEEE
ELPGDQELIELAEAAPNASAAVIKLFRAYREQAERLSDLNELLAREGRATALSGARLPID
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHH
EVHETFERRPNHFTALEEEAEAFTAVLDPGDDLFGALKAWLKREYGIAVKVLPVATMPNW
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCHH
RRRYDRHSQRLFLSERLSPFDQLREVAMEACLIRMTVTVAGEIQALKLTTDEARRLARFE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCEEEEEECHHHHHHHHHHH
LGRYAAHALMMPYQAFHAAAVRARYDIDVLRSRFGVSFEQAANRLTMLQRQGALGVPFFM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE
LEVDNAGNRFRRAGSQGFPHSRFGGGCPKLPVHAAFTQPGQVFVEAVEMPDGAEFLCIAR
EEECCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEEEEE
TLEGPQGAFAERPRRTALLLGCDIGFRDDIVYGAALPGAVVGARAGQGAVAATPVGPACR
CCCCCCCCHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCCEEECCCCHHHH
LCERVGCLARAEPPVTRPLGLDEMVTGLSAFDFQ
HHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]