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The map label for this gene is glxA [H]

Identifier: 13475441

GI number: 13475441

Start: 5319044

End: 5320063

Strand: Direct

Name: glxA [H]

Synonym: mlr6509

Alternate gene names: 13475441

Gene position: 5319044-5320063 (Clockwise)

Preceding gene: 13475440

Following gene: 13475442

Centisome position: 75.6

GC content: 65.39

Gene sequence:

>1020_bases
TTGACCCTGAAAGCGCCAGTTTTGCCGAACCCCACCATTTCCCCGGAACGGCCGGTCACGACTGATCCCGTTCAAGGTGG
CCGGCAGTTCGCCTTCCTGCTGGTCGACAAGTTTTCCATGTTCTCGCTGGCCGCGGCGATCGACACGTTCCGGTCGGCGA
ACCGTCTGCTCGGCCGGGATTTCTATGGCTGGACCACGGTGTCGGCCGATGGCGATCCGGTGATGGCGTCCAACGGCCTG
CCGCTCAAGATCGACTATGCCGTCGCCGACCTGCCGCCGGTTGACATCCTCTTCGTCTCGGTCGGCCTGACGACGGAATT
TCCCGGCAAGAGCAAGGTCCTGGCCGCGTTGCGCAGCTGGGGCCGGCGCGGCAACGCGCTTGGCGCGCTGTCGGTCGGGT
CCTACCTGCTGGCCGAGGCCGGCCAGCTCGACGGTTACCGCTGCACCATCCATTGGGAAAACCGCGCCGGCTTCATGGAG
CGTTTCCCCGACATCAACTGCACCGGCAATGTCTTCGAGATCGACCGCAAGCGCTACACCTGCGCCGGCGGCACCACCTC
GATCGACCTGATGCTGGAGATCGTGCGCGGCGATTTCGGCTCGAACCTCGCCAATGGCGTCGCCAACCAGTTCCAGCACG
AGCGCATCCGCTCGGCCGGGGACCGCCAGCGCGTCGGGCCGGAACGCGATCTGACCGGCAAGTCGGAGAAGCTCAGGCGC
ATCGTCGAACTGATGGCCGACCATCTCGACGAACCGCTGTCGGCGGTGCAACTCGCAAAATCGGCCGGTCTTTCCGTGCG
TCAGGTGGAGCGTCTGTTCCTGCGCCACCTCAACGTGACGCCCGGCCGCTACTACATGCGGCTGCGGCTGGAGCGGGCGC
GCGAATTGCTGCGCCAGACCAACATGCCGATCCTCGACGTGGCGATCGCGACCGGCTTCACCTCGCATTCCTATTTCGCC
CAGAGCTACCGGCTGCAGTTCGGCAGGCCACCCTCGGAAGAGCGTCGCACCACTTACTGA

Upstream 100 bases:

>100_bases
GGTGGTGTCGGGCCGATGACCATTGCCATGCTGATGGCCAATACGTTAGCTTCTGCCTACCTTGCGGCCGGATTGAAGCG
GCCCACCTTCTGAGCCCGGG

Downstream 100 bases:

>100_bases
GCCGGGGCTTCGGTCTGCCCCAGGACGCCTGCCGCTGGGGCGATCCTGCTGCACGAACGCTTTTTTCCCCGCCCAGAGGC
CCGAGCGAGACGGCCGCGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MTLKAPVLPNPTISPERPVTTDPVQGGRQFAFLLVDKFSMFSLAAAIDTFRSANRLLGRDFYGWTTVSADGDPVMASNGL
PLKIDYAVADLPPVDILFVSVGLTTEFPGKSKVLAALRSWGRRGNALGALSVGSYLLAEAGQLDGYRCTIHWENRAGFME
RFPDINCTGNVFEIDRKRYTCAGGTTSIDLMLEIVRGDFGSNLANGVANQFQHERIRSAGDRQRVGPERDLTGKSEKLRR
IVELMADHLDEPLSAVQLAKSAGLSVRQVERLFLRHLNVTPGRYYMRLRLERARELLRQTNMPILDVAIATGFTSHSYFA
QSYRLQFGRPPSEERRTTY

Sequences:

>Translated_339_residues
MTLKAPVLPNPTISPERPVTTDPVQGGRQFAFLLVDKFSMFSLAAAIDTFRSANRLLGRDFYGWTTVSADGDPVMASNGL
PLKIDYAVADLPPVDILFVSVGLTTEFPGKSKVLAALRSWGRRGNALGALSVGSYLLAEAGQLDGYRCTIHWENRAGFME
RFPDINCTGNVFEIDRKRYTCAGGTTSIDLMLEIVRGDFGSNLANGVANQFQHERIRSAGDRQRVGPERDLTGKSEKLRR
IVELMADHLDEPLSAVQLAKSAGLSVRQVERLFLRHLNVTPGRYYMRLRLERARELLRQTNMPILDVAIATGFTSHSYFA
QSYRLQFGRPPSEERRTTY
>Mature_338_residues
TLKAPVLPNPTISPERPVTTDPVQGGRQFAFLLVDKFSMFSLAAAIDTFRSANRLLGRDFYGWTTVSADGDPVMASNGLP
LKIDYAVADLPPVDILFVSVGLTTEFPGKSKVLAALRSWGRRGNALGALSVGSYLLAEAGQLDGYRCTIHWENRAGFMER
FPDINCTGNVFEIDRKRYTCAGGTTSIDLMLEIVRGDFGSNLANGVANQFQHERIRSAGDRQRVGPERDLTGKSEKLRRI
VELMADHLDEPLSAVQLAKSAGLSVRQVERLFLRHLNVTPGRYYMRLRLERARELLRQTNMPILDVAIATGFTSHSYFAQ
SYRLQFGRPPSEERRTTY

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=109, Percent_Identity=28.4403669724771, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37778; Mature: 37646

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKAPVLPNPTISPERPVTTDPVQGGRQFAFLLVDKFSMFSLAAAIDTFRSANRLLGRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
FYGWTTVSADGDPVMASNGLPLKIDYAVADLPPVDILFVSVGLTTEFPGKSKVLAALRSW
CCCEEEECCCCCCEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
GRRGNALGALSVGSYLLAEAGQLDGYRCTIHWENRAGFMERFPDINCTGNVFEIDRKRYT
CCCCCCEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCEEEECCCEEE
CAGGTTSIDLMLEIVRGDFGSNLANGVANQFQHERIRSAGDRQRVGPERDLTGKSEKLRR
ECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHH
IVELMADHLDEPLSAVQLAKSAGLSVRQVERLFLRHLNVTPGRYYMRLRLERARELLRQT
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
NMPILDVAIATGFTSHSYFAQSYRLQFGRPPSEERRTTY
CCCEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLKAPVLPNPTISPERPVTTDPVQGGRQFAFLLVDKFSMFSLAAAIDTFRSANRLLGRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
FYGWTTVSADGDPVMASNGLPLKIDYAVADLPPVDILFVSVGLTTEFPGKSKVLAALRSW
CCCEEEECCCCCCEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
GRRGNALGALSVGSYLLAEAGQLDGYRCTIHWENRAGFMERFPDINCTGNVFEIDRKRYT
CCCCCCEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCEEEECCCEEE
CAGGTTSIDLMLEIVRGDFGSNLANGVANQFQHERIRSAGDRQRVGPERDLTGKSEKLRR
ECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHH
IVELMADHLDEPLSAVQLAKSAGLSVRQVERLFLRHLNVTPGRYYMRLRLERARELLRQT
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
NMPILDVAIATGFTSHSYFAQSYRLQFGRPPSEERRTTY
CCCEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]