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The map label for this gene is 13475425

Identifier: 13475425

GI number: 13475425

Start: 5298703

End: 5299539

Strand: Reverse

Name: 13475425

Synonym: mll6489

Alternate gene names: NA

Gene position: 5299539-5298703 (Counterclockwise)

Preceding gene: 13475427

Following gene: 13475419

Centisome position: 75.32

GC content: 56.87

Gene sequence:

>837_bases
ATGGAGCCGATGGACCTCTTTGGTCTGAAATCGCTGCTCATTTGCGCCCTGATCTTCGTACCGCTGGAGCACATGCTCGC
CCTGCGGACGCAACAAAAGATATTCCGCAAGGGCATCGGCACCGATGTGATCTACGCCGTCGTCAATGGTGCGTTCCTCA
AGATTTGCATTATCCTGATGGCGGCAGCGGCTATGGGTGTCTCGGCGTCTTTGGTACCTGAGAAGGTAACGATGACAGTG
AGCGGTCAGGCGACTTGGCTCCAGGTCGTAGAGATCATCATCGTGGCCGATCTCGGCGTCTATGCCTCCCACCGGGCGTT
CCATGCAATCCCGGCGCTCTGGAGATTCCACGCCATCCATCATGGCATCGAGGAATTGGACTGGATGGTTTCTTTCCGGG
CGCATCCGGTGGACCAGATCATCACCAAGGCTGTCTCGCTTCTGCCTGTATTCTTTCTGGGTTTTTCGTCAGAGGCCATA
ACGGTATACTTCATCATCGCTACCGGGCATGCGCTGTTTCTGCACTCCAACGTCAGGGTGAACTTCGGGCCGCTCAAATG
GGTGATCGCAAGCCCTCAATTCCACCATTGGCATCACGCCGATCAACGCGACGCCTATGACAAGAACTTCGCCAGTCACT
TGGCCGTCATCGACGCGCTGTTCGGGACGTTTCATATTCCAGGCTCCAGAATGCCCGAGAAATATGGAGTCGATGAGCCG
ATCCCGACGGATTATATCGGCCAGCACGGCTACCCGTTCGTGCGCGGCACTCAACAGGGCCGGAATACAGGGGATGCCGT
CGTCAAGCCGACGCCCGAAGAAGTAGCGCGCAGGTAG

Upstream 100 bases:

>100_bases
CGGCCAGAAGGTCAGAGCGGACCGGTTAACTGTTTGGAAACCATTGCCTTGTGTGAGGGGCCATGAAGTGGTTCACTCGT
CCGGTAAATGACATTGAGAG

Downstream 100 bases:

>100_bases
CCCAGCGCCCGTCAATTGTTCACATCGATATCGATAGAGAGCCGGGAACCATAAAGCCGTATCCGACCTGCAAGGCGATC
ATGCAAATCGACGCCACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase Family Protein; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Transmembrane Protein; C-5 Sterol Desaturase; Sterol Desaturase-Like; TRAP Dicarboxylate Transporter; Sterol Desaturase Protein; Sterol Desaturase -Like Protein; Transmembrane Fatty Acid Synthesis Protein; Methyltransferase Type; Fatty Acid Hydroxylase Superfamily; Sterol Desaturate; TRAP Dicarboxylate Transporter DctM Subunit; TRAP Dicarboxylate Transporter Subunit DctM; Sterol Desaturase Transmembrane Protein; Creatininase Subfamily

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MEPMDLFGLKSLLICALIFVPLEHMLALRTQQKIFRKGIGTDVIYAVVNGAFLKICIILMAAAAMGVSASLVPEKVTMTV
SGQATWLQVVEIIIVADLGVYASHRAFHAIPALWRFHAIHHGIEELDWMVSFRAHPVDQIITKAVSLLPVFFLGFSSEAI
TVYFIIATGHALFLHSNVRVNFGPLKWVIASPQFHHWHHADQRDAYDKNFASHLAVIDALFGTFHIPGSRMPEKYGVDEP
IPTDYIGQHGYPFVRGTQQGRNTGDAVVKPTPEEVARR

Sequences:

>Translated_278_residues
MEPMDLFGLKSLLICALIFVPLEHMLALRTQQKIFRKGIGTDVIYAVVNGAFLKICIILMAAAAMGVSASLVPEKVTMTV
SGQATWLQVVEIIIVADLGVYASHRAFHAIPALWRFHAIHHGIEELDWMVSFRAHPVDQIITKAVSLLPVFFLGFSSEAI
TVYFIIATGHALFLHSNVRVNFGPLKWVIASPQFHHWHHADQRDAYDKNFASHLAVIDALFGTFHIPGSRMPEKYGVDEP
IPTDYIGQHGYPFVRGTQQGRNTGDAVVKPTPEEVARR
>Mature_278_residues
MEPMDLFGLKSLLICALIFVPLEHMLALRTQQKIFRKGIGTDVIYAVVNGAFLKICIILMAAAAMGVSASLVPEKVTMTV
SGQATWLQVVEIIIVADLGVYASHRAFHAIPALWRFHAIHHGIEELDWMVSFRAHPVDQIITKAVSLLPVFFLGFSSEAI
TVYFIIATGHALFLHSNVRVNFGPLKWVIASPQFHHWHHADQRDAYDKNFASHLAVIDALFGTFHIPGSRMPEKYGVDEP
IPTDYIGQHGYPFVRGTQQGRNTGDAVVKPTPEEVARR

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51972212, Length=148, Percent_Identity=31.7567567567568, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30944; Mature: 30944

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPMDLFGLKSLLICALIFVPLEHMLALRTQQKIFRKGIGTDVIYAVVNGAFLKICIILM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AAAAMGVSASLVPEKVTMTVSGQATWLQVVEIIIVADLGVYASHRAFHAIPALWRFHAIH
HHHHHCCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HGIEELDWMVSFRAHPVDQIITKAVSLLPVFFLGFSSEAITVYFIIATGHALFLHSNVRV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCEE
NFGPLKWVIASPQFHHWHHADQRDAYDKNFASHLAVIDALFGTFHIPGSRMPEKYGVDEP
EECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC
IPTDYIGQHGYPFVRGTQQGRNTGDAVVKPTPEEVARR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MEPMDLFGLKSLLICALIFVPLEHMLALRTQQKIFRKGIGTDVIYAVVNGAFLKICIILM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AAAAMGVSASLVPEKVTMTVSGQATWLQVVEIIIVADLGVYASHRAFHAIPALWRFHAIH
HHHHHCCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HGIEELDWMVSFRAHPVDQIITKAVSLLPVFFLGFSSEAITVYFIIATGHALFLHSNVRV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEECCCEE
NFGPLKWVIASPQFHHWHHADQRDAYDKNFASHLAVIDALFGTFHIPGSRMPEKYGVDEP
EECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC
IPTDYIGQHGYPFVRGTQQGRNTGDAVVKPTPEEVARR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA