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The map label for this gene is 13475418

Identifier: 13475418

GI number: 13475418

Start: 5291904

End: 5292968

Strand: Reverse

Name: 13475418

Synonym: mll6480

Alternate gene names: NA

Gene position: 5292968-5291904 (Counterclockwise)

Preceding gene: 13475419

Following gene: 13475417

Centisome position: 75.23

GC content: 65.92

Gene sequence:

>1065_bases
ATGCGCGCAAATACCGTCATCATGATCGTCCTCGCCGGCGTGTTCGGCGTGCTTGCAGTGGTGCTCGCCAACATCTGGCT
GGCCAATCAGCGCAGCGCGATTGCGCAGACGAATGATATCCAGCGCGATACGGTCGTGGTGGCCGCGGTGGCGCTGAAGT
TCGGCGACACGCTGTCCGCCGACAAGTTGCGCGAAGTCGCATGGCCGGCGGGCGCGGTTCCGGCCGGTGCCTTCAAGACA
ACGGAAGAACTCCTGACGAAAGACGTCCTCCCTGGCGCAGCCCCCAAGCAGGCATTGCAGGCGATCGGCGTCAATGAACC
GGTACTCGCCACCAAGATCACCGGCCCGGGCCAGCGCGCCACGCTTTCGGCGGTGCTCGGCGAAGGCATGAAGGCCGTGT
CCATCCGCGTCAACGACGTGCTTGGCGTCGCCGGCTTCGTCTTCCCGGGAGACCGGGTGGACGTGCTGCTGACGCGGACC
GTGCGAAGCGACGATGGCGCGGATCAAAGTTTTGTCGACGTGCTGCTGCAAGGCATGAGGGTGCTCGCGGTCGACCAGGT
GGCCGACGAAAGCAAGGACAGCCCGACCGTCGTCAAATCGGTGACGCTCGAGGCCAGCACCAAGGACGCGCAGAAGCTGA
CCCTGGCGGCAGGCGCCGGCCAATTGTCGCTGGCGCTTCGCCAGGCCGCCGCCAGCAAGGGCGAAACGACGGAGCGGGTG
ACGCTTTCCGACCTGACCGGCGAAATGCCGGCCGACGTCGCCAAAAAGCAAGCCGAACTCGCCAAGCAGGCTGCGGCCGA
TGCTGCTGCCGCGGCCGATCGTCAGCGCGCGGAAGATGCGCAGAAGCGCGCCGACGAGAAGATCGCAGGATTGGCACAGG
CCGTGGAGCGAGTGGGTAGCAAGCTCGACGAGTTGGGCAAGGTCAAGCCGGCTCCGGCGGTGGCCTCCGCGCCGGAAGTG
CGGGAAGTCGTCAAATATGTCACACCCGAGCCGCCGTCGCGTGCCACCGTGGGCGTTTTTCGAGGGGTGAAGCTCGAGAC
ATATGACGTGCCGCGACAGCCATGA

Upstream 100 bases:

>100_bases
ACTCGGCAGGCCTTGGCGCAAAATGCTTGGGCCTGCCTCTTTTCAACCGGAGACAGGCGACCCTTGGGGGGGCACGTAGT
CGATTGAGTGGGTTGGGGTT

Downstream 100 bases:

>100_bases
TATAAAGGCGCAGCTAAAAAAATGAGGCTGCAATCGGGGAGACGGGGATGCAGGGGTTTTGGGTGAGGATGGCTGCGGTC
GCGCTGTCCTGTTTCGCGAC

Product: pilus assembly protein

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Flp Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Pilus Assembly Domain-Containing Protein; CpaB Family Protein; SAF Domain Protein; Flp Pilus Assembly Protein CpaB-Like Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRANTVIMIVLAGVFGVLAVVLANIWLANQRSAIAQTNDIQRDTVVVAAVALKFGDTLSADKLREVAWPAGAVPAGAFKT
TEELLTKDVLPGAAPKQALQAIGVNEPVLATKITGPGQRATLSAVLGEGMKAVSIRVNDVLGVAGFVFPGDRVDVLLTRT
VRSDDGADQSFVDVLLQGMRVLAVDQVADESKDSPTVVKSVTLEASTKDAQKLTLAAGAGQLSLALRQAAASKGETTERV
TLSDLTGEMPADVAKKQAELAKQAAADAAAAADRQRAEDAQKRADEKIAGLAQAVERVGSKLDELGKVKPAPAVASAPEV
REVVKYVTPEPPSRATVGVFRGVKLETYDVPRQP

Sequences:

>Translated_354_residues
MRANTVIMIVLAGVFGVLAVVLANIWLANQRSAIAQTNDIQRDTVVVAAVALKFGDTLSADKLREVAWPAGAVPAGAFKT
TEELLTKDVLPGAAPKQALQAIGVNEPVLATKITGPGQRATLSAVLGEGMKAVSIRVNDVLGVAGFVFPGDRVDVLLTRT
VRSDDGADQSFVDVLLQGMRVLAVDQVADESKDSPTVVKSVTLEASTKDAQKLTLAAGAGQLSLALRQAAASKGETTERV
TLSDLTGEMPADVAKKQAELAKQAAADAAAAADRQRAEDAQKRADEKIAGLAQAVERVGSKLDELGKVKPAPAVASAPEV
REVVKYVTPEPPSRATVGVFRGVKLETYDVPRQP
>Mature_354_residues
MRANTVIMIVLAGVFGVLAVVLANIWLANQRSAIAQTNDIQRDTVVVAAVALKFGDTLSADKLREVAWPAGAVPAGAFKT
TEELLTKDVLPGAAPKQALQAIGVNEPVLATKITGPGQRATLSAVLGEGMKAVSIRVNDVLGVAGFVFPGDRVDVLLTRT
VRSDDGADQSFVDVLLQGMRVLAVDQVADESKDSPTVVKSVTLEASTKDAQKLTLAAGAGQLSLALRQAAASKGETTERV
TLSDLTGEMPADVAKKQAELAKQAAADAAAAADRQRAEDAQKRADEKIAGLAQAVERVGSKLDELGKVKPAPAVASAPEV
REVVKYVTPEPPSRATVGVFRGVKLETYDVPRQP

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36927; Mature: 36927

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRANTVIMIVLAGVFGVLAVVLANIWLANQRSAIAQTNDIQRDTVVVAAVALKFGDTLSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCH
DKLREVAWPAGAVPAGAFKTTEELLTKDVLPGAAPKQALQAIGVNEPVLATKITGPGQRA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHH
TLSAVLGEGMKAVSIRVNDVLGVAGFVFPGDRVDVLLTRTVRSDDGADQSFVDVLLQGMR
HHHHHHHCCCEEEEEEEHHHHHHHHEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
VLAVDQVADESKDSPTVVKSVTLEASTKDAQKLTLAAGAGQLSLALRQAAASKGETTERV
HHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHEEEECCCCHHHHHHHHHHHCCCCCCCEE
TLSDLTGEMPADVAKKQAELAKQAAADAAAAADRQRAEDAQKRADEKIAGLAQAVERVGS
EHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLDELGKVKPAPAVASAPEVREVVKYVTPEPPSRATVGVFRGVKLETYDVPRQP
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure
MRANTVIMIVLAGVFGVLAVVLANIWLANQRSAIAQTNDIQRDTVVVAAVALKFGDTLSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCH
DKLREVAWPAGAVPAGAFKTTEELLTKDVLPGAAPKQALQAIGVNEPVLATKITGPGQRA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHH
TLSAVLGEGMKAVSIRVNDVLGVAGFVFPGDRVDVLLTRTVRSDDGADQSFVDVLLQGMR
HHHHHHHCCCEEEEEEEHHHHHHHHEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
VLAVDQVADESKDSPTVVKSVTLEASTKDAQKLTLAAGAGQLSLALRQAAASKGETTERV
HHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHEEEECCCCHHHHHHHHHHHCCCCCCCEE
TLSDLTGEMPADVAKKQAELAKQAAADAAAAADRQRAEDAQKRADEKIAGLAQAVERVGS
EHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLDELGKVKPAPAVASAPEVREVVKYVTPEPPSRATVGVFRGVKLETYDVPRQP
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA