| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475416
Identifier: 13475416
GI number: 13475416
Start: 5288536
End: 5290038
Strand: Reverse
Name: 13475416
Synonym: mll6478
Alternate gene names: NA
Gene position: 5290038-5288536 (Counterclockwise)
Preceding gene: 13475417
Following gene: 13475415
Centisome position: 75.18
GC content: 59.81
Gene sequence:
>1503_bases ATGCTGCGGACCATTCGCGCGTTCTGGCACGATCAAAGGGGAATAGCGCTGATCCTCGTCAGCGTCACGCTGCCGGCGCT TATCGGCTTTTCCCTGTTGGCCATCGACATGAGCCGGGTCAACAATTTGCACAATGATTTGCAGAAGGCGGCGGACGCCT TTGCATTGGCTGGAGCCGCCGAGCTCGATGGCTTGCCCGGTTCATGGGCCAGAGCCGAACGCGCCATGGCGACACTAGTT ACCAACCAGGCCGCATTCTCGACCGTTGGCACCAATGGCCGGTTCACCTTGACATCAGGGCAACCAGGCGGCACCGCACG CTGCAACAGCGCCGGCAACATTTCGTGGTGCTTCCTGAAGACCATACCTGCGTCGGACGCAACTCCGGTCAGCAGTGCAA ACTATGCCAATGCTACGCAATCCATCGGCGAAGATGAAACCGTATTCGTCGAAGTGACGGTGGCGCCGACCGGTTTCGCC GCGATATTCCCGGCGTCGTTCCTGACGGGCAATGCGGCCAGTAACAGCTTCAACGTCGCTGCCAAGGCGACTGCCGGGTT CACATCGGGCGTCTGCGATTACACACCCGTTTTCATGTGCAACCCGTATGAGGACACAAGCATCACCGGCGGCGTCACGC TGGAGCAGGCGGCACAAACCAGGCAATACCGCCGCCGGCAGATCGTGCTGCGCGGCGACGGATCCTATTTTCCCGGCAAC TTCGCTTTCCTGTCTTCTCCGTTCGGCAACGGCGCCAATAAACTCGAACAAATGCTCGCCGACTCCAAGCCACAGAATTG CTATTCGCGTGACGGCGTCGACACCGAGCCGGGCCAGAATGCCGGGCCTGTAGAGAACGGTATCAACTCGCGCTTTGGCA TCGATTCGTCAAACTACTCGGATGGACCCGCGGTCAATGTGCGCAAGGGCGCCAAAAACGGCAGCCAGTTCGTCAAGAGC AACAAGGTCAACTATGAAACAGACCCGACGAAAGGTGTCGGGCTTGAGCGCGATTCGTGCCAGATCGCCGGCAACTGCAC CTTGATGGGCGGCCGCATGGGCGCCGGTGACTGGAATTTCGCGCGCTACTGGGCCGCCAATCATCCCACACGTGCCGTGC CAGCGGCGCTATCAGGAACCGGCACCAATCTCCCGACACGTTATGAAGTCTATCGCTACGAGATCGACAACAATATCTAT CAGGATCCTGCGGTCGGTGGCGAAACGGGTATCCCACCCGCTGCGGCAGGCACTCCGATCTCGATCCCAGACCGCCGGTT GCTTTACGGCGCAATCCTGGACTGCAATGCGCTTCAGGCTTCGGGCACGAATTTCAACGGCCGCCAGACGGGGATTCCGG TCAGGAGGTTCGGTAGCTTCTTCATCACCGAGCCTATCAAGGACGGGAAGAACATCTACGTCGAACTGGTCGACATCACC GGCAAAGGCGGCAACGGGACGCTCGACAACTACCTGCGCGACGAAGCGCAGCTCTACCGGTGA
Upstream 100 bases:
>100_bases TGACGACGAACACAACGCCGTAAACTGAACAGAAGGATGCGGTTTCAGTGCGCCAGGCCAAACGAGGGAACCTGGCGTCA GGGGAGCAAAGAGTAAGGCC
Downstream 100 bases:
>100_bases CCGCGATGTTCAAGATGCTGTCCCGATATCTCGGTCGATTTCGACACGACCAGCGCGGCGCGGTGATGGTCGAGATGACA CTGATCACCCCGCTGATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAAELDGLPGSWARAERAMATLV TNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLKTIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFA AIFPASFLTGNAASNSFNVAAKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYSDGPAVNVRKGAKNGSQFVKS NKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNFARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIY QDPAVGGETGIPPAAAGTPISIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT GKGGNGTLDNYLRDEAQLYR
Sequences:
>Translated_500_residues MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAAELDGLPGSWARAERAMATLV TNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLKTIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFA AIFPASFLTGNAASNSFNVAAKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYSDGPAVNVRKGAKNGSQFVKS NKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNFARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIY QDPAVGGETGIPPAAAGTPISIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT GKGGNGTLDNYLRDEAQLYR >Mature_500_residues MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAAELDGLPGSWARAERAMATLV TNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLKTIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFA AIFPASFLTGNAASNSFNVAAKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYSDGPAVNVRKGAKNGSQFVKS NKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNFARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIY QDPAVGGETGIPPAAAGTPISIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT GKGGNGTLDNYLRDEAQLYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53234; Mature: 53234
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAA CCCEEEHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ELDGLPGSWARAERAMATLVTNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLK HCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCEEEEECCCCCCCEECCCCCCEEEEEEE TIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFAAIFPASFLTGNAASNSFNVA ECCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE AKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN EEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCC FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYS EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC DGPAVNVRKGAKNGSQFVKSNKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNF CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCC ARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIYQDPAVGGETGIPPAAAGTPI EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCC SIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT CCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHHHCCEEEECCCCCCCEEEEEEEEEE GKGGNGTLDNYLRDEAQLYR CCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAA CCCEEEHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ELDGLPGSWARAERAMATLVTNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLK HCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCEEEEECCCCCCCEECCCCCCEEEEEEE TIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFAAIFPASFLTGNAASNSFNVA ECCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE AKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN EEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCC FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYS EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC DGPAVNVRKGAKNGSQFVKSNKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNF CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCC ARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIYQDPAVGGETGIPPAAAGTPI EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCC SIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT CCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHHHCCEEEECCCCCCCEEEEEEEEEE GKGGNGTLDNYLRDEAQLYR CCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA