Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475416

Identifier: 13475416

GI number: 13475416

Start: 5288536

End: 5290038

Strand: Reverse

Name: 13475416

Synonym: mll6478

Alternate gene names: NA

Gene position: 5290038-5288536 (Counterclockwise)

Preceding gene: 13475417

Following gene: 13475415

Centisome position: 75.18

GC content: 59.81

Gene sequence:

>1503_bases
ATGCTGCGGACCATTCGCGCGTTCTGGCACGATCAAAGGGGAATAGCGCTGATCCTCGTCAGCGTCACGCTGCCGGCGCT
TATCGGCTTTTCCCTGTTGGCCATCGACATGAGCCGGGTCAACAATTTGCACAATGATTTGCAGAAGGCGGCGGACGCCT
TTGCATTGGCTGGAGCCGCCGAGCTCGATGGCTTGCCCGGTTCATGGGCCAGAGCCGAACGCGCCATGGCGACACTAGTT
ACCAACCAGGCCGCATTCTCGACCGTTGGCACCAATGGCCGGTTCACCTTGACATCAGGGCAACCAGGCGGCACCGCACG
CTGCAACAGCGCCGGCAACATTTCGTGGTGCTTCCTGAAGACCATACCTGCGTCGGACGCAACTCCGGTCAGCAGTGCAA
ACTATGCCAATGCTACGCAATCCATCGGCGAAGATGAAACCGTATTCGTCGAAGTGACGGTGGCGCCGACCGGTTTCGCC
GCGATATTCCCGGCGTCGTTCCTGACGGGCAATGCGGCCAGTAACAGCTTCAACGTCGCTGCCAAGGCGACTGCCGGGTT
CACATCGGGCGTCTGCGATTACACACCCGTTTTCATGTGCAACCCGTATGAGGACACAAGCATCACCGGCGGCGTCACGC
TGGAGCAGGCGGCACAAACCAGGCAATACCGCCGCCGGCAGATCGTGCTGCGCGGCGACGGATCCTATTTTCCCGGCAAC
TTCGCTTTCCTGTCTTCTCCGTTCGGCAACGGCGCCAATAAACTCGAACAAATGCTCGCCGACTCCAAGCCACAGAATTG
CTATTCGCGTGACGGCGTCGACACCGAGCCGGGCCAGAATGCCGGGCCTGTAGAGAACGGTATCAACTCGCGCTTTGGCA
TCGATTCGTCAAACTACTCGGATGGACCCGCGGTCAATGTGCGCAAGGGCGCCAAAAACGGCAGCCAGTTCGTCAAGAGC
AACAAGGTCAACTATGAAACAGACCCGACGAAAGGTGTCGGGCTTGAGCGCGATTCGTGCCAGATCGCCGGCAACTGCAC
CTTGATGGGCGGCCGCATGGGCGCCGGTGACTGGAATTTCGCGCGCTACTGGGCCGCCAATCATCCCACACGTGCCGTGC
CAGCGGCGCTATCAGGAACCGGCACCAATCTCCCGACACGTTATGAAGTCTATCGCTACGAGATCGACAACAATATCTAT
CAGGATCCTGCGGTCGGTGGCGAAACGGGTATCCCACCCGCTGCGGCAGGCACTCCGATCTCGATCCCAGACCGCCGGTT
GCTTTACGGCGCAATCCTGGACTGCAATGCGCTTCAGGCTTCGGGCACGAATTTCAACGGCCGCCAGACGGGGATTCCGG
TCAGGAGGTTCGGTAGCTTCTTCATCACCGAGCCTATCAAGGACGGGAAGAACATCTACGTCGAACTGGTCGACATCACC
GGCAAAGGCGGCAACGGGACGCTCGACAACTACCTGCGCGACGAAGCGCAGCTCTACCGGTGA

Upstream 100 bases:

>100_bases
TGACGACGAACACAACGCCGTAAACTGAACAGAAGGATGCGGTTTCAGTGCGCCAGGCCAAACGAGGGAACCTGGCGTCA
GGGGAGCAAAGAGTAAGGCC

Downstream 100 bases:

>100_bases
CCGCGATGTTCAAGATGCTGTCCCGATATCTCGGTCGATTTCGACACGACCAGCGCGGCGCGGTGATGGTCGAGATGACA
CTGATCACCCCGCTGATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAAELDGLPGSWARAERAMATLV
TNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLKTIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFA
AIFPASFLTGNAASNSFNVAAKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN
FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYSDGPAVNVRKGAKNGSQFVKS
NKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNFARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIY
QDPAVGGETGIPPAAAGTPISIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT
GKGGNGTLDNYLRDEAQLYR

Sequences:

>Translated_500_residues
MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAAELDGLPGSWARAERAMATLV
TNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLKTIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFA
AIFPASFLTGNAASNSFNVAAKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN
FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYSDGPAVNVRKGAKNGSQFVKS
NKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNFARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIY
QDPAVGGETGIPPAAAGTPISIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT
GKGGNGTLDNYLRDEAQLYR
>Mature_500_residues
MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAAELDGLPGSWARAERAMATLV
TNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLKTIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFA
AIFPASFLTGNAASNSFNVAAKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN
FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYSDGPAVNVRKGAKNGSQFVKS
NKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNFARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIY
QDPAVGGETGIPPAAAGTPISIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT
GKGGNGTLDNYLRDEAQLYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53234; Mature: 53234

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAA
CCCEEEHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ELDGLPGSWARAERAMATLVTNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLK
HCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCEEEEECCCCCCCEECCCCCCEEEEEEE
TIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFAAIFPASFLTGNAASNSFNVA
ECCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE
AKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN
EEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCC
FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYS
EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
DGPAVNVRKGAKNGSQFVKSNKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNF
CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCC
ARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIYQDPAVGGETGIPPAAAGTPI
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCC
SIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT
CCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHHHCCEEEECCCCCCCEEEEEEEEEE
GKGGNGTLDNYLRDEAQLYR
CCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLRTIRAFWHDQRGIALILVSVTLPALIGFSLLAIDMSRVNNLHNDLQKAADAFALAGAA
CCCEEEHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ELDGLPGSWARAERAMATLVTNQAAFSTVGTNGRFTLTSGQPGGTARCNSAGNISWCFLK
HCCCCCCCHHHHHHHHHHHHHCCHHHEEECCCCEEEEECCCCCCCEECCCCCCEEEEEEE
TIPASDATPVSSANYANATQSIGEDETVFVEVTVAPTGFAAIFPASFLTGNAASNSFNVA
ECCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE
AKATAGFTSGVCDYTPVFMCNPYEDTSITGGVTLEQAAQTRQYRRRQIVLRGDGSYFPGN
EEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCC
FAFLSSPFGNGANKLEQMLADSKPQNCYSRDGVDTEPGQNAGPVENGINSRFGIDSSNYS
EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
DGPAVNVRKGAKNGSQFVKSNKVNYETDPTKGVGLERDSCQIAGNCTLMGGRMGAGDWNF
CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCC
ARYWAANHPTRAVPAALSGTGTNLPTRYEVYRYEIDNNIYQDPAVGGETGIPPAAAGTPI
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCC
SIPDRRLLYGAILDCNALQASGTNFNGRQTGIPVRRFGSFFITEPIKDGKNIYVELVDIT
CCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHHHCCEEEECCCCCCCEEEEEEEEEE
GKGGNGTLDNYLRDEAQLYR
CCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA