| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475367
Identifier: 13475367
GI number: 13475367
Start: 5235913
End: 5236776
Strand: Direct
Name: 13475367
Synonym: mlr6414
Alternate gene names: NA
Gene position: 5235913-5236776 (Clockwise)
Preceding gene: 13475366
Following gene: 13475368
Centisome position: 74.42
GC content: 60.3
Gene sequence:
>864_bases ATGAGCAGCGAGCATATCGATGAAGTCTCGGGCATCTCAACGACCGGTCATGAATGGGACGGGATAAGGGAACTCAACAA CCCATTGCCCCGATGGTGGGTGATAACCTTCTACATCACCGTCGCTTGGGCGGTGGCTTATACAATTGCGTATCCGGCTT GGCCGATGCTGTCTTCCGCGACCAAGGGTGTGCTTGGCTATTCTAGCCGCAACGCTGTCAAGATTGAGCTGGCGGCTGCC GAAGCCGCCAAGGGCAAATATGTCGCGGCCATCCAGCAGAAGACCGTATCCGAGATCGCAGCCGACGACGCGCTGCGTGA ATTCGCGGTAGCGGCCGGCGGAGCTACCTTCAAGGTCAATTGCGTGCAATGCCACGGCTCGGGCGCCCAAGGGTCGAAGG GCTTTCCAAACCTGAACGACGATGACTGGCTGTGGGGCGGCACGACCGAGCAGATCCAGCAAACGATCGCGCACGGCATC CGTTTCGCATCCGACCCGGATACTCGGCAGTCGGAAATGCCCCCCTTCGGTGACATCATCACGCCCGAACAGATCGCACA GGTCGGCGCCTATGTCGCCAGCCTCTCGGGCAAGGTCCAGGATGCAAGTCTTATCGAGCCCGGCGCCAAGGTATTCGGGG AAAACTGCGTCGCCTGTCATGGCGATAATGCGAAAGGCAACAAAGAGCTCGGCGCGCCCAATCTGACCGATGCGATCTGG CTCTACGCACCCGGCGAGACAGCCATCGCCGTCCAAGTCCGCGCGCCGAAGCACGGTGTCATGCCGGCCTGGATCGGGCG TCTCGGCGAGACCAAGGTTAAGGAACTTGCGGTTTATGTCCATTCGCTTGGCGGCGGAGAATAG
Upstream 100 bases:
>100_bases TGGCGCTCTTCTACGTCGGCGGCATTGCCTTTGCCTTGCGTCCCGGCGGCAAAACACAGGCCGATCAAGCCGCCCAGATT CCACTCAAGGACGACTGATC
Downstream 100 bases:
>100_bases GAACGGAAGCCTATTCTCGGCCCTCCCCGCCAAGCGACGGGGCCCGGCACGAGTCGGGCCCCGACACCATTCCGGCATGC GGCGATTGACCTGCAGCAAG
Product: cytochrome-c oxidase fixP chain
Products: ferricytochrome c; H2O
Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome C Oxidase Subunit CcoP; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase FixP Chain; Cytochrome C Class I; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Subunit III; Cytochrome C; Cytochrome-C Oxidase Subunit III; Cytochrome C Subfamily; Cytochrome C Oxidase CcoP Subunit; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Cytochrome C Oxidase; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSSEHIDEVSGISTTGHEWDGIRELNNPLPRWWVITFYITVAWAVAYTIAYPAWPMLSSATKGVLGYSSRNAVKIELAAA EAAKGKYVAAIQQKTVSEIAADDALREFAVAAGGATFKVNCVQCHGSGAQGSKGFPNLNDDDWLWGGTTEQIQQTIAHGI RFASDPDTRQSEMPPFGDIITPEQIAQVGAYVASLSGKVQDASLIEPGAKVFGENCVACHGDNAKGNKELGAPNLTDAIW LYAPGETAIAVQVRAPKHGVMPAWIGRLGETKVKELAVYVHSLGGGE
Sequences:
>Translated_287_residues MSSEHIDEVSGISTTGHEWDGIRELNNPLPRWWVITFYITVAWAVAYTIAYPAWPMLSSATKGVLGYSSRNAVKIELAAA EAAKGKYVAAIQQKTVSEIAADDALREFAVAAGGATFKVNCVQCHGSGAQGSKGFPNLNDDDWLWGGTTEQIQQTIAHGI RFASDPDTRQSEMPPFGDIITPEQIAQVGAYVASLSGKVQDASLIEPGAKVFGENCVACHGDNAKGNKELGAPNLTDAIW LYAPGETAIAVQVRAPKHGVMPAWIGRLGETKVKELAVYVHSLGGGE >Mature_286_residues SSEHIDEVSGISTTGHEWDGIRELNNPLPRWWVITFYITVAWAVAYTIAYPAWPMLSSATKGVLGYSSRNAVKIELAAAE AAKGKYVAAIQQKTVSEIAADDALREFAVAAGGATFKVNCVQCHGSGAQGSKGFPNLNDDDWLWGGTTEQIQQTIAHGIR FASDPDTRQSEMPPFGDIITPEQIAQVGAYVASLSGKVQDASLIEPGAKVFGENCVACHGDNAKGNKELGAPNLTDAIWL YAPGETAIAVQVRAPKHGVMPAWIGRLGETKVKELAVYVHSLGGGE
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 30553; Mature: 30421
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEHIDEVSGISTTGHEWDGIRELNNPLPRWWVITFYITVAWAVAYTIAYPAWPMLSSA CCCHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TKGVLGYSSRNAVKIELAAAEAAKGKYVAAIQQKTVSEIAADDALREFAVAAGGATFKVN HCCCEECCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE CVQCHGSGAQGSKGFPNLNDDDWLWGGTTEQIQQTIAHGIRFASDPDTRQSEMPPFGDII EEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TPEQIAQVGAYVASLSGKVQDASLIEPGAKVFGENCVACHGDNAKGNKELGAPNLTDAIW CHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEE LYAPGETAIAVQVRAPKHGVMPAWIGRLGETKVKELAVYVHSLGGGE EEECCCEEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSEHIDEVSGISTTGHEWDGIRELNNPLPRWWVITFYITVAWAVAYTIAYPAWPMLSSA CCHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TKGVLGYSSRNAVKIELAAAEAAKGKYVAAIQQKTVSEIAADDALREFAVAAGGATFKVN HCCCEECCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE CVQCHGSGAQGSKGFPNLNDDDWLWGGTTEQIQQTIAHGIRFASDPDTRQSEMPPFGDII EEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC TPEQIAQVGAYVASLSGKVQDASLIEPGAKVFGENCVACHGDNAKGNKELGAPNLTDAIW CHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEE LYAPGETAIAVQVRAPKHGVMPAWIGRLGETKVKELAVYVHSLGGGE EEECCCEEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA