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The map label for this gene is trbB [H]

Identifier: 13475352

GI number: 13475352

Start: 5220585

End: 5221553

Strand: Direct

Name: trbB [H]

Synonym: mlr6397

Alternate gene names: 13475352

Gene position: 5220585-5221553 (Clockwise)

Preceding gene: 13475351

Following gene: 13475353

Centisome position: 74.2

GC content: 64.4

Gene sequence:

>969_bases
ATGAGCGCTCATCCAGAGGCCGACCACCGACGCCGCGCCATGCTGCGCACCGCCATGGGTCCGACGATCACTGAGGCGCT
GGCCGATCCATTGGTCATCGAGGTGATGGTCAATCCCGATGGTGCGCTGCGGCTCGACCGGCTGGGAGAAGGCCGAATCG
ATACGGCCGTGCATATGCATCCTTCCGAGGCGGAACGCATCATCCGCCTGGTCGCTTCCCACGTGCGTGCCGAGGCGCAT
GCGGACAATCCGATTGTCAGCGCCGAATTGCCATCGGGCGAACGCTTCGAGGGACTGCTGCCGCCTGTCGTGCTGGCGCC
TTGCTTTGCCATCCGCAAACCAGCCGCAAAGCTCTACACGCTGGCCAACTATGTTGCGGATCGCATCATGTTGCCGCTGC
AGGCCGATGCGTTGATAAAGGCAGTCCGAGAACGGCGCAACATCCTTGTCGCCGGAGGCACGTCGTCGGGTAAGACGACG
CTTGCCAATGCGCTGCTGGCCGAAGTCGCCGAATGCGACGAGCGAGTGATCCTCATCGAGGACACCCGCGAACTGCAATG
CGCAGCAAAGGACTGCGTTGCCCTGAGAACCAGGCGGGGCTCGGTCACACTCGCCGATCTCGTGCGCTCGACGCTCCGGC
TCCGTCCCGACCGCATCATCGTCGGTGAAGTCAGGGGCGCGGAAGCGCTGGACATGCTCAAGGCATGGAACACCGGGCAC
CCCGGCGGCATCGCCACGGTTCATGCCAATTCGGCGCGCTCTGCCCTCTATCGCATCGAGCAGCTTGCACAGGAAGCTGT
CGTCACCGTGCCGCGCCGCCTCATCGCCGATGCCATCGATCTCATCGTCTTCATCGCGGGGCGCGGCTCGTCGCGCCGCA
TCGATGCAATCGCTGAGGTCACAGGTCTCGACGGCAGCGGCGACTACGCCGTCTCCCCACTCACGCCTCCGCAACTCCAG
CAACTCTGA

Upstream 100 bases:

>100_bases
TTGCCCAGGAGCGTTTCGACAAATTCGTCGAGCAGGTCGGTCGCCAGATCGCATCGGGGAAACGCTCGCTTGGCAAAGAC
AATGGCGGAGGAGGGGAAGG

Downstream 100 bases:

>100_bases
AAGGCCCCCTTATGCGCAAGAAGCTCCGCTTTCTTTCGTTTGCCGCGCTCGCGTTTCTTCTCACAGTTCCGGCGCACGCT
GCCGGCTCCGGCATGCCTTG

Product: conjugal transfer protein traB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSAHPEADHRRRAMLRTAMGPTITEALADPLVIEVMVNPDGALRLDRLGEGRIDTAVHMHPSEAERIIRLVASHVRAEAH
ADNPIVSAELPSGERFEGLLPPVVLAPCFAIRKPAAKLYTLANYVADRIMLPLQADALIKAVRERRNILVAGGTSSGKTT
LANALLAEVAECDERVILIEDTRELQCAAKDCVALRTRRGSVTLADLVRSTLRLRPDRIIVGEVRGAEALDMLKAWNTGH
PGGIATVHANSARSALYRIEQLAQEAVVTVPRRLIADAIDLIVFIAGRGSSRRIDAIAEVTGLDGSGDYAVSPLTPPQLQ
QL

Sequences:

>Translated_322_residues
MSAHPEADHRRRAMLRTAMGPTITEALADPLVIEVMVNPDGALRLDRLGEGRIDTAVHMHPSEAERIIRLVASHVRAEAH
ADNPIVSAELPSGERFEGLLPPVVLAPCFAIRKPAAKLYTLANYVADRIMLPLQADALIKAVRERRNILVAGGTSSGKTT
LANALLAEVAECDERVILIEDTRELQCAAKDCVALRTRRGSVTLADLVRSTLRLRPDRIIVGEVRGAEALDMLKAWNTGH
PGGIATVHANSARSALYRIEQLAQEAVVTVPRRLIADAIDLIVFIAGRGSSRRIDAIAEVTGLDGSGDYAVSPLTPPQLQ
QL
>Mature_321_residues
SAHPEADHRRRAMLRTAMGPTITEALADPLVIEVMVNPDGALRLDRLGEGRIDTAVHMHPSEAERIIRLVASHVRAEAHA
DNPIVSAELPSGERFEGLLPPVVLAPCFAIRKPAAKLYTLANYVADRIMLPLQADALIKAVRERRNILVAGGTSSGKTTL
ANALLAEVAECDERVILIEDTRELQCAAKDCVALRTRRGSVTLADLVRSTLRLRPDRIIVGEVRGAEALDMLKAWNTGHP
GGIATVHANSARSALYRIEQLAQEAVVTVPRRLIADAIDLIVFIAGRGSSRRIDAIAEVTGLDGSGDYAVSPLTPPQLQQ
L

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=156, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 34753; Mature: 34621

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHPEADHRRRAMLRTAMGPTITEALADPLVIEVMVNPDGALRLDRLGEGRIDTAVHMH
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEC
PSEAERIIRLVASHVRAEAHADNPIVSAELPSGERFEGLLPPVVLAPCFAIRKPAAKLYT
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHH
LANYVADRIMLPLQADALIKAVRERRNILVAGGTSSGKTTLANALLAEVAECDERVILIE
HHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
DTRELQCAAKDCVALRTRRGSVTLADLVRSTLRLRPDRIIVGEVRGAEALDMLKAWNTGH
CCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCC
PGGIATVHANSARSALYRIEQLAQEAVVTVPRRLIADAIDLIVFIAGRGSSRRIDAIAEV
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
TGLDGSGDYAVSPLTPPQLQQL
HCCCCCCCEEECCCCCHHHHCC
>Mature Secondary Structure 
SAHPEADHRRRAMLRTAMGPTITEALADPLVIEVMVNPDGALRLDRLGEGRIDTAVHMH
CCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEC
PSEAERIIRLVASHVRAEAHADNPIVSAELPSGERFEGLLPPVVLAPCFAIRKPAAKLYT
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHH
LANYVADRIMLPLQADALIKAVRERRNILVAGGTSSGKTTLANALLAEVAECDERVILIE
HHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
DTRELQCAAKDCVALRTRRGSVTLADLVRSTLRLRPDRIIVGEVRGAEALDMLKAWNTGH
CCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCC
PGGIATVHANSARSALYRIEQLAQEAVVTVPRRLIADAIDLIVFIAGRGSSRRIDAIAEV
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHH
TGLDGSGDYAVSPLTPPQLQQL
HCCCCCCCEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]