| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475332
Identifier: 13475332
GI number: 13475332
Start: 5198316
End: 5200019
Strand: Direct
Name: 13475332
Synonym: mlr6372
Alternate gene names: NA
Gene position: 5198316-5200019 (Clockwise)
Preceding gene: 13475331
Following gene: 13475341
Centisome position: 73.88
GC content: 60.39
Gene sequence:
>1704_bases GTGGGCGGGGAGAAATCTCATACAACTGGCAGCGAAGGGAGGCTCGGCCCAATGAGCGGGGTGGCGCGTGAAGAAGTTAA TCCGGTGTCATCGGCAACGTTCCCGCCGCTCGAGAATTCAACTTTCCGTCCGATCTGGATTGCCACACAGGTATCCAGTC TAGGGTGGCTGATTCAAATGGTTGCCATCAGTTGGCTGATGGCGACCATTTCGACATCGGATGTGATGGTCGCCTTGGTG CAGGCTTCGACAACCTTGCCCACATTCCTCCTGTCAATTATCGCCGGCGCCCTAGCGGACAATTACAGCCGCCGCAATCT CATGTTCGCTGGCTGGTGCGTGATAGCATCGTCCTCGACGATGCTGACTGTTCTTGCAGGTCTCGGAATTTTCAATCCAT GGATGGTTCTTGCATTCAGCTGTTTGGCCGGAGTAGGCGCCGCTTTCACCGACCCCGCCTGGCACGCGTCGGTTGGCGAT ATCCTGCGAAAGCGCGATGTTCCGGCCGCCGTCACGCTTATTTCGGTCGGATATAACGCCGTCCGAAGCATCGGTCCCGC TCTCGGTGGAGTCGTCGTTGCTTCCTTTGGCCCTTTGACGGCTTTCGCAGTGGCGACGCTTACATATCTGATGCTGCTGT GGACCATAGGGCGCTGCAAATGGCAAGTTCGCCCGTCACCGCTGCCGAGTGAACCATTGACCACGGCGATCCATGACGGA GCGCGCTTCACTGCCCTGTCATCCGAAATCAAGGCAGCAATTGCCCGCGGTGCCCTCTTTGGGCTGACGAGCATCTCTAT ACTAGCGCTCTTGCCTCTCGTCGCCCGCGATCAGCTGGGGGGAGGGCCAGTCGTTTACGGCATCCTGATGGCCGGCTTCG GGACCGGCGCCTTGTTCGCCGGCATCTGCAACAACATTCTGAGACGGAGGCTGTCCCAGGAACGTTTGACGACACTGTCG TGCATCGCCTGTGCGGCTTGTTGTCTATCGCTTGCTTTCACCCCCTCGGTGGCGGTGGCGGCTATCGCGCTGGCGCTCGG CGGCGCGGGCTGGGTCGTGACCTGGACCGGGCTGGACGTAAGCGTCCAGTTGGCGAGTCCAAGGTGGGTCGTTGGTCGCA CGCTCTCGATCTATTACGCCCTTTCATCCGGCGGCATCGCGGCTGGCAGCTGGCTGTGGGGTACGGTGGTCGAGAGCTAT TCGCTGAGCTCGGCTCTGGAGCTTTCAGGTGGCGCGCTGCTGCTGGTCGCTGGCACCGGCTTCCTGCTGCCCATCCGTCA ATGGAAAGATTCCGATCAGGCTCCTCTTGGCTTCGAAACGCCTCAGGTTGCCCTGGATTTGAAGCCCCGAAGCGGGCCGA TCGTCGCCAAGATCGAATATTCAATACCCGAAGCAAATGTCGAAGCGTTCCTGGAGCAGATGCGGGAACGGCGGCGAGTA CAAAGCGGCGTTGGTGCGCGACACTGGAATCTCCAGCGCGACCTCCAGCAGCCTTCGCGTTGGACAGAAACCTTCCGCAC CCCGACCTGGATGGACTACCTTCGCCTGAACCACCGCCTTACGGCAGCCGACAAGGAGTTGGACCAGCGTCTCCTCGCAT TGCACCTGGGAGAGCTTCCTCCTCGAACCACGCTTGCGATCGAGCGGCCGACTGGAGCTGGCCGCAAGCGGGACCAATCG ATGCGGTTCTTTTTCCGGCGTTGA
Upstream 100 bases:
>100_bases TCCACCGGAAGCATTCGGTTCTGCCACAGCATCGGCCAGGCAAAAATAACTTGCGTTGCGCAGATAAAATGCCCTGATCC TGCCATTCCTCCATGGGCAC
Downstream 100 bases:
>100_bases CATCCGTCCAGGCGTCCGCGCTGGTGAGACAGGATGGGTTGGAAACGAGCCACCGCTCTCACCATCCGTTTTGCAGATCG GCTTCGATCCATTCGAGTGG
Product: transport protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; MFS Transporter; Transporter Facilitator Family; Integral Membrane Efflux Protein; Permeases Of Facilitator Superfamily; Permease; Facilitator Superfamily; Transporter Facilitator Family Protein; Transport Transmembrane Protein; MFS Family Transporter Protein; Mfs Transporter; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Facilitator MFS1 Protein; Transmembrane Efflux Protein; Multidrug ABC Transporter; ABC Transporter Permease Protein; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Membrane Efflux Protein MFS; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MGGEKSHTTGSEGRLGPMSGVAREEVNPVSSATFPPLENSTFRPIWIATQVSSLGWLIQMVAISWLMATISTSDVMVALV QASTTLPTFLLSIIAGALADNYSRRNLMFAGWCVIASSSTMLTVLAGLGIFNPWMVLAFSCLAGVGAAFTDPAWHASVGD ILRKRDVPAAVTLISVGYNAVRSIGPALGGVVVASFGPLTAFAVATLTYLMLLWTIGRCKWQVRPSPLPSEPLTTAIHDG ARFTALSSEIKAAIARGALFGLTSISILALLPLVARDQLGGGPVVYGILMAGFGTGALFAGICNNILRRRLSQERLTTLS CIACAACCLSLAFTPSVAVAAIALALGGAGWVVTWTGLDVSVQLASPRWVVGRTLSIYYALSSGGIAAGSWLWGTVVESY SLSSALELSGGALLLVAGTGFLLPIRQWKDSDQAPLGFETPQVALDLKPRSGPIVAKIEYSIPEANVEAFLEQMRERRRV QSGVGARHWNLQRDLQQPSRWTETFRTPTWMDYLRLNHRLTAADKELDQRLLALHLGELPPRTTLAIERPTGAGRKRDQS MRFFFRR
Sequences:
>Translated_567_residues MGGEKSHTTGSEGRLGPMSGVAREEVNPVSSATFPPLENSTFRPIWIATQVSSLGWLIQMVAISWLMATISTSDVMVALV QASTTLPTFLLSIIAGALADNYSRRNLMFAGWCVIASSSTMLTVLAGLGIFNPWMVLAFSCLAGVGAAFTDPAWHASVGD ILRKRDVPAAVTLISVGYNAVRSIGPALGGVVVASFGPLTAFAVATLTYLMLLWTIGRCKWQVRPSPLPSEPLTTAIHDG ARFTALSSEIKAAIARGALFGLTSISILALLPLVARDQLGGGPVVYGILMAGFGTGALFAGICNNILRRRLSQERLTTLS CIACAACCLSLAFTPSVAVAAIALALGGAGWVVTWTGLDVSVQLASPRWVVGRTLSIYYALSSGGIAAGSWLWGTVVESY SLSSALELSGGALLLVAGTGFLLPIRQWKDSDQAPLGFETPQVALDLKPRSGPIVAKIEYSIPEANVEAFLEQMRERRRV QSGVGARHWNLQRDLQQPSRWTETFRTPTWMDYLRLNHRLTAADKELDQRLLALHLGELPPRTTLAIERPTGAGRKRDQS MRFFFRR >Mature_566_residues GGEKSHTTGSEGRLGPMSGVAREEVNPVSSATFPPLENSTFRPIWIATQVSSLGWLIQMVAISWLMATISTSDVMVALVQ ASTTLPTFLLSIIAGALADNYSRRNLMFAGWCVIASSSTMLTVLAGLGIFNPWMVLAFSCLAGVGAAFTDPAWHASVGDI LRKRDVPAAVTLISVGYNAVRSIGPALGGVVVASFGPLTAFAVATLTYLMLLWTIGRCKWQVRPSPLPSEPLTTAIHDGA RFTALSSEIKAAIARGALFGLTSISILALLPLVARDQLGGGPVVYGILMAGFGTGALFAGICNNILRRRLSQERLTTLSC IACAACCLSLAFTPSVAVAAIALALGGAGWVVTWTGLDVSVQLASPRWVVGRTLSIYYALSSGGIAAGSWLWGTVVESYS LSSALELSGGALLLVAGTGFLLPIRQWKDSDQAPLGFETPQVALDLKPRSGPIVAKIEYSIPEANVEAFLEQMRERRRVQ SGVGARHWNLQRDLQQPSRWTETFRTPTWMDYLRLNHRLTAADKELDQRLLALHLGELPPRTTLAIERPTGAGRKRDQSM RFFFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60815; Mature: 60684
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGEKSHTTGSEGRLGPMSGVAREEVNPVSSATFPPLENSTFRPIWIATQVSSLGWLIQM CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH VAISWLMATISTSDVMVALVQASTTLPTFLLSIIAGALADNYSRRNLMFAGWCVIASSST HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCH MLTVLAGLGIFNPWMVLAFSCLAGVGAAFTDPAWHASVGDILRKRDVPAAVTLISVGYNA HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH VRSIGPALGGVVVASFGPLTAFAVATLTYLMLLWTIGRCKWQVRPSPLPSEPLTTAIHDG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHCCC ARFTALSSEIKAAIARGALFGLTSISILALLPLVARDQLGGGPVVYGILMAGFGTGALFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH GICNNILRRRLSQERLTTLSCIACAACCLSLAFTPSVAVAAIALALGGAGWVVTWTGLDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCEE SVQLASPRWVVGRTLSIYYALSSGGIAAGSWLWGTVVESYSLSSALELSGGALLLVAGTG EEEECCCCEEECCEEEEEEEECCCCEECCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCC FLLPIRQWKDSDQAPLGFETPQVALDLKPRSGPIVAKIEYSIPEANVEAFLEQMRERRRV CEEEHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH QSGVGARHWNLQRDLQQPSRWTETFRTPTWMDYLRLNHRLTAADKELDQRLLALHLGELP HHCCCCCCCCHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC PRTTLAIERPTGAGRKRDQSMRFFFRR CCCEEEEECCCCCCCCCCHHHHHHHCC >Mature Secondary Structure GGEKSHTTGSEGRLGPMSGVAREEVNPVSSATFPPLENSTFRPIWIATQVSSLGWLIQM CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH VAISWLMATISTSDVMVALVQASTTLPTFLLSIIAGALADNYSRRNLMFAGWCVIASSST HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCH MLTVLAGLGIFNPWMVLAFSCLAGVGAAFTDPAWHASVGDILRKRDVPAAVTLISVGYNA HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH VRSIGPALGGVVVASFGPLTAFAVATLTYLMLLWTIGRCKWQVRPSPLPSEPLTTAIHDG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHCCC ARFTALSSEIKAAIARGALFGLTSISILALLPLVARDQLGGGPVVYGILMAGFGTGALFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH GICNNILRRRLSQERLTTLSCIACAACCLSLAFTPSVAVAAIALALGGAGWVVTWTGLDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCEE SVQLASPRWVVGRTLSIYYALSSGGIAAGSWLWGTVVESYSLSSALELSGGALLLVAGTG EEEECCCCEEECCEEEEEEEECCCCEECCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCC FLLPIRQWKDSDQAPLGFETPQVALDLKPRSGPIVAKIEYSIPEANVEAFLEQMRERRRV CEEEHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH QSGVGARHWNLQRDLQQPSRWTETFRTPTWMDYLRLNHRLTAADKELDQRLLALHLGELP HHCCCCCCCCHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC PRTTLAIERPTGAGRKRDQSMRFFFRR CCCEEEEECCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA