Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475320

Identifier: 13475320

GI number: 13475320

Start: 5172841

End: 5175279

Strand: Direct

Name: 13475320

Synonym: mlr6358

Alternate gene names: NA

Gene position: 5172841-5175279 (Clockwise)

Preceding gene: 13475313

Following gene: 13475322

Centisome position: 73.52

GC content: 60.48

Gene sequence:

>2439_bases
ATGGCTGACACATCAGCCCCAATCCACAGACAGCGCGTTCTCGTCTATATCGGAGATGAAAAAATGACGGGCATTGGCCG
ATCTGGAAAATCGCGCATTGGAGATGCTGGAGCCGGATCGAGCAGTTCGCGCTCGCAATCAGGTCTTGCCTCCGGGGAAG
GCAGCCAAGGGTTCGGTTCCGTCCTGGAGCGGATGCGCTCTGAGGGAGGTAAAGGTTCACCCTCGGCTGGCGCTGCGCGA
GGTGCCCATGATGACCTTGGCGGCAAATCTTCAGGCCCTTCCGTTCCCCCACATCGAATCCCGGCGGCTGCGCCACGTGC
AGCCGCCGGGCCACGTGCGGCCGGTTCGCGGAGGCGCAGTGTTTCCTCAACGTCGGATGGTGAAGCCCTGGCGCCGGTCG
CCAGCCAGCCGTCAACTTCGGGTGTGACAGTCCCCAGTTCCTCGTCAGGCGAAGTCATCAACGAGACAAAGCGACGAATG
TGCTCGCTGATTGACGAAATCCAAGTTCTCGAAGAGAAGAGCCTGCATAGCGGAAAACCGATGGAGGGCTTCCGAGACGA
GCTTGATCAGCTCGCTAATGCGGGCGCAGAACTTCTGGAATGCTACGCGAGCCTGCCCAAGGATGAGGCGCGCAGCACTC
TGTCCGACGATGATGTGCGTCACTACCGCGCCGACGTGATTCATCGGGCGGACAGTGCCAACGAGCTGGCCCATACGATC
TTCAAGAAGGAGGAACAGAACCGGAAGCGGATGGAGGACATTCTCCACAACTTGGTCAAATCCAATGCCACCCTCGACCA
GCTGAGCCGATCGGCTCCCAGTATGGCGAAGTATCCCGTGGCCTGCGTGGAGCGTTGGGACAAGAAAGTACAGCGCCACG
AATTGATGCGGGCCGTCTGCGTCGCGACAGCCGACTTACCAAGCTCAACAGCCGAGATGCGGCGGGAAGAAGAGGCCGCG
CTGCGGCTGCACTCGGGCTGGGTTGTCAATTCAAAGATAATGCAGCTGCAATCGCGGATCAATCTCGCGCAGGTCAACAT
GGCCCCGCAGGCGATCATGCTCGAAGCACCCATCAGGGAACTCCTCATCGGTGACAACGGGCAAACGCGTCTGCTGGGTA
ACTTCATCGGCGAGGTTTTTCCGGCATTCGTCTCGACGGCCGAAGCTGTACTGAGGAAGGAAGGGCGCCCGCTCGACGCG
GAACACTGCGCCGTTCTGGAAGGAGTTGTGGAGCGGCTTGCGGATTTTGCGTCGGCCTCGCACTCCGTGGTTGACAGGCT
AAGGGATCACCAAGCAGGTGCTGGCCTCCCATTGGAACTGTTGACCCGGATCGTGGACGACGCCTGGATCGCTTCGGACG
AGGTTACGGACCTCCTCGCACTGCAGCCGAAGCCGCCAGCCCCTGACCTGACGGCCGACGCTGCCGCTGCGATGCCGACT
GGAACTGCCGGCAAGACTATGGTGGCCGAAAGCACTACAGCGCCCAGAAAAAAAGGAAAAGACAAGAGCAAGCAGGCCGC
TGGCGCCGGGAGTTCGGCGGCCGGGCGGCCGGAGCCGCAAGTCGCTGCGGCCGTCAGCGACCCTGCGCCAGCAGCCAAGG
TGCTCGTACGCACGGATTTAGGTACGAAGAAGCTCGTGAGTGCAGAGGAGGCGCAGAACAGTGCGTCGTCCGCGGCAGCA
CGCTTGGCGATCTTGCAAAATCCAACGACGGGGGAAAACACGAAGTCACTAGTCGCACGGTCGACCGAACTTTTGAAGTT
CGATTTGCCTGCTCAGCAAAGTTTGATCTCCCGAGCGCGCTCCGGGAAGCCCGAGGACGTCGAACACGCCGTCGGCCTCG
TGGTCCAGCGCCTGCAAACGCAGGCTGTCGAGATGGAGCCCTGCCTCCCAGCGTTGGAGGCGTCTCGTCTCTCCAAGGAG
GGAAAGATGGACGACGTGCACCGACTAACGGTTCAGTTCAGGGACATGTTGGCCAATGTGCGGGGATTGGCTAAAGCTTG
GGACGAACAAAAGCCTGATATGATCATGGATTGCATGAAGAGGTACCCATTTCCCTCGCAAAACCACCTTGAGCAGTTGC
GGTCGGCCCGGGAGTTGACGCCTGCAGATCCCCCGTGCGCGTTGAACCCAGAGCCGAGCAATCTGTTCGAGATTAGGCTG
CAGCCCAAGGCGCTGAGCAACCGTACACTACCGAGTCCAATGTGGGTGCACATCCACACGACACGAAAGATATATGCGCA
GCAGTTGGCAACGCTGGACAGCGCCGAGTTCGCCGCTTGCCACGTCAAGTCCAATGAACAGCGCGGCCATAATCGGCAGT
GGCAGACCTCCCGGGCTAAGAAGGGTTACGACAACGCAATCCACCGCGGCAAGCTCACCCCGGCGTTCTGTAAGTCCTTG
TTGAGCGACCGGGCCGATATGCGAAATGGGCCGGCGTAA

Upstream 100 bases:

>100_bases
GCTGGCCATGACGACTGACGAAAACATGCCGCTGGTTCTCAGACGTCATGCCACCTGTCATCTGGGCGATTGCACTTACC
CGCCAGAGCCCTGATGCACT

Downstream 100 bases:

>100_bases
CATCGGCATTTTGTGGATTCCAACCAGCTTAGTAGACAGAGGCGCAATCTGGGAAACCCCTGGCAGAGCGGCAGTGGCCT
GGATCGCAGGTGTGGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Effector Protein

Number of amino acids: Translated: 812; Mature: 811

Protein sequence:

>812_residues
MADTSAPIHRQRVLVYIGDEKMTGIGRSGKSRIGDAGAGSSSSRSQSGLASGEGSQGFGSVLERMRSEGGKGSPSAGAAR
GAHDDLGGKSSGPSVPPHRIPAAAPRAAAGPRAAGSRRRSVSSTSDGEALAPVASQPSTSGVTVPSSSSGEVINETKRRM
CSLIDEIQVLEEKSLHSGKPMEGFRDELDQLANAGAELLECYASLPKDEARSTLSDDDVRHYRADVIHRADSANELAHTI
FKKEEQNRKRMEDILHNLVKSNATLDQLSRSAPSMAKYPVACVERWDKKVQRHELMRAVCVATADLPSSTAEMRREEEAA
LRLHSGWVVNSKIMQLQSRINLAQVNMAPQAIMLEAPIRELLIGDNGQTRLLGNFIGEVFPAFVSTAEAVLRKEGRPLDA
EHCAVLEGVVERLADFASASHSVVDRLRDHQAGAGLPLELLTRIVDDAWIASDEVTDLLALQPKPPAPDLTADAAAAMPT
GTAGKTMVAESTTAPRKKGKDKSKQAAGAGSSAAGRPEPQVAAAVSDPAPAAKVLVRTDLGTKKLVSAEEAQNSASSAAA
RLAILQNPTTGENTKSLVARSTELLKFDLPAQQSLISRARSGKPEDVEHAVGLVVQRLQTQAVEMEPCLPALEASRLSKE
GKMDDVHRLTVQFRDMLANVRGLAKAWDEQKPDMIMDCMKRYPFPSQNHLEQLRSARELTPADPPCALNPEPSNLFEIRL
QPKALSNRTLPSPMWVHIHTTRKIYAQQLATLDSAEFAACHVKSNEQRGHNRQWQTSRAKKGYDNAIHRGKLTPAFCKSL
LSDRADMRNGPA

Sequences:

>Translated_812_residues
MADTSAPIHRQRVLVYIGDEKMTGIGRSGKSRIGDAGAGSSSSRSQSGLASGEGSQGFGSVLERMRSEGGKGSPSAGAAR
GAHDDLGGKSSGPSVPPHRIPAAAPRAAAGPRAAGSRRRSVSSTSDGEALAPVASQPSTSGVTVPSSSSGEVINETKRRM
CSLIDEIQVLEEKSLHSGKPMEGFRDELDQLANAGAELLECYASLPKDEARSTLSDDDVRHYRADVIHRADSANELAHTI
FKKEEQNRKRMEDILHNLVKSNATLDQLSRSAPSMAKYPVACVERWDKKVQRHELMRAVCVATADLPSSTAEMRREEEAA
LRLHSGWVVNSKIMQLQSRINLAQVNMAPQAIMLEAPIRELLIGDNGQTRLLGNFIGEVFPAFVSTAEAVLRKEGRPLDA
EHCAVLEGVVERLADFASASHSVVDRLRDHQAGAGLPLELLTRIVDDAWIASDEVTDLLALQPKPPAPDLTADAAAAMPT
GTAGKTMVAESTTAPRKKGKDKSKQAAGAGSSAAGRPEPQVAAAVSDPAPAAKVLVRTDLGTKKLVSAEEAQNSASSAAA
RLAILQNPTTGENTKSLVARSTELLKFDLPAQQSLISRARSGKPEDVEHAVGLVVQRLQTQAVEMEPCLPALEASRLSKE
GKMDDVHRLTVQFRDMLANVRGLAKAWDEQKPDMIMDCMKRYPFPSQNHLEQLRSARELTPADPPCALNPEPSNLFEIRL
QPKALSNRTLPSPMWVHIHTTRKIYAQQLATLDSAEFAACHVKSNEQRGHNRQWQTSRAKKGYDNAIHRGKLTPAFCKSL
LSDRADMRNGPA
>Mature_811_residues
ADTSAPIHRQRVLVYIGDEKMTGIGRSGKSRIGDAGAGSSSSRSQSGLASGEGSQGFGSVLERMRSEGGKGSPSAGAARG
AHDDLGGKSSGPSVPPHRIPAAAPRAAAGPRAAGSRRRSVSSTSDGEALAPVASQPSTSGVTVPSSSSGEVINETKRRMC
SLIDEIQVLEEKSLHSGKPMEGFRDELDQLANAGAELLECYASLPKDEARSTLSDDDVRHYRADVIHRADSANELAHTIF
KKEEQNRKRMEDILHNLVKSNATLDQLSRSAPSMAKYPVACVERWDKKVQRHELMRAVCVATADLPSSTAEMRREEEAAL
RLHSGWVVNSKIMQLQSRINLAQVNMAPQAIMLEAPIRELLIGDNGQTRLLGNFIGEVFPAFVSTAEAVLRKEGRPLDAE
HCAVLEGVVERLADFASASHSVVDRLRDHQAGAGLPLELLTRIVDDAWIASDEVTDLLALQPKPPAPDLTADAAAAMPTG
TAGKTMVAESTTAPRKKGKDKSKQAAGAGSSAAGRPEPQVAAAVSDPAPAAKVLVRTDLGTKKLVSAEEAQNSASSAAAR
LAILQNPTTGENTKSLVARSTELLKFDLPAQQSLISRARSGKPEDVEHAVGLVVQRLQTQAVEMEPCLPALEASRLSKEG
KMDDVHRLTVQFRDMLANVRGLAKAWDEQKPDMIMDCMKRYPFPSQNHLEQLRSARELTPADPPCALNPEPSNLFEIRLQ
PKALSNRTLPSPMWVHIHTTRKIYAQQLATLDSAEFAACHVKSNEQRGHNRQWQTSRAKKGYDNAIHRGKLTPAFCKSLL
SDRADMRNGPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87395; Mature: 87263

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTSAPIHRQRVLVYIGDEKMTGIGRSGKSRIGDAGAGSSSSRSQSGLASGEGSQGFGS
CCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
VLERMRSEGGKGSPSAGAARGAHDDLGGKSSGPSVPPHRIPAAAPRAAAGPRAAGSRRRS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
VSSTSDGEALAPVASQPSTSGVTVPSSSSGEVINETKRRMCSLIDEIQVLEEKSLHSGKP
CCCCCCCCEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MEGFRDELDQLANAGAELLECYASLPKDEARSTLSDDDVRHYRADVIHRADSANELAHTI
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH
FKKEEQNRKRMEDILHNLVKSNATLDQLSRSAPSMAKYPVACVERWDKKVQRHELMRAVC
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VATADLPSSTAEMRREEEAALRLHSGWVVNSKIMQLQSRINLAQVNMAPQAIMLEAPIRE
HHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHH
LLIGDNGQTRLLGNFIGEVFPAFVSTAEAVLRKEGRPLDAEHCAVLEGVVERLADFASAS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
HSVVDRLRDHQAGAGLPLELLTRIVDDAWIASDEVTDLLALQPKPPAPDLTADAAAAMPT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHEECCCCCCCCCCCHHHHCCCC
GTAGKTMVAESTTAPRKKGKDKSKQAAGAGSSAAGRPEPQVAAAVSDPAPAAKVLVRTDL
CCCCCEEEECCCCCCHHCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHEEEECCC
GTKKLVSAEEAQNSASSAAARLAILQNPTTGENTKSLVARSTELLKFDLPAQQSLISRAR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHH
SGKPEDVEHAVGLVVQRLQTQAVEMEPCLPALEASRLSKEGKMDDVHRLTVQFRDMLANV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RGLAKAWDEQKPDMIMDCMKRYPFPSQNHLEQLRSARELTPADPPCALNPEPSNLFEIRL
HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
QPKALSNRTLPSPMWVHIHTTRKIYAQQLATLDSAEFAACHVKSNEQRGHNRQWQTSRAK
CCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCHHHHHHH
KGYDNAIHRGKLTPAFCKSLLSDRADMRNGPA
CCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ADTSAPIHRQRVLVYIGDEKMTGIGRSGKSRIGDAGAGSSSSRSQSGLASGEGSQGFGS
CCCCCCCCCCEEEEEECCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
VLERMRSEGGKGSPSAGAARGAHDDLGGKSSGPSVPPHRIPAAAPRAAAGPRAAGSRRRS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
VSSTSDGEALAPVASQPSTSGVTVPSSSSGEVINETKRRMCSLIDEIQVLEEKSLHSGKP
CCCCCCCCEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MEGFRDELDQLANAGAELLECYASLPKDEARSTLSDDDVRHYRADVIHRADSANELAHTI
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH
FKKEEQNRKRMEDILHNLVKSNATLDQLSRSAPSMAKYPVACVERWDKKVQRHELMRAVC
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VATADLPSSTAEMRREEEAALRLHSGWVVNSKIMQLQSRINLAQVNMAPQAIMLEAPIRE
HHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHH
LLIGDNGQTRLLGNFIGEVFPAFVSTAEAVLRKEGRPLDAEHCAVLEGVVERLADFASAS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
HSVVDRLRDHQAGAGLPLELLTRIVDDAWIASDEVTDLLALQPKPPAPDLTADAAAAMPT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHEECCCCCCCCCCCHHHHCCCC
GTAGKTMVAESTTAPRKKGKDKSKQAAGAGSSAAGRPEPQVAAAVSDPAPAAKVLVRTDL
CCCCCEEEECCCCCCHHCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHEEEECCC
GTKKLVSAEEAQNSASSAAARLAILQNPTTGENTKSLVARSTELLKFDLPAQQSLISRAR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHH
SGKPEDVEHAVGLVVQRLQTQAVEMEPCLPALEASRLSKEGKMDDVHRLTVQFRDMLANV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RGLAKAWDEQKPDMIMDCMKRYPFPSQNHLEQLRSARELTPADPPCALNPEPSNLFEIRL
HHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
QPKALSNRTLPSPMWVHIHTTRKIYAQQLATLDSAEFAACHVKSNEQRGHNRQWQTSRAK
CCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCHHHHHHH
KGYDNAIHRGKLTPAFCKSLLSDRADMRNGPA
CCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA