Click here to switch to the map view.

The map label for this gene is 13475279

Identifier: 13475279

GI number: 13475279

Start: 5125206

End: 5125415

Strand: Reverse

Name: 13475279

Synonym: msl6314

Alternate gene names: NA

Gene position: 5125415-5125206 (Counterclockwise)

Preceding gene: 13475282

Following gene: 13475273

Centisome position: 72.84

GC content: 57.14

Gene sequence:

>210_bases
GTGGGATCTGGCGGCATGACCAGATTTTCCCGTGATTATCGTCGCCACCGATTTCCGGCGCAGGTGATTGCCCGTGCCGT
TTGGCTCTATTTCCGGTTTCCGCTCAGCCTGCGGATGGTCGAGGATATGCCGGCAGCTCGTGGCGTCATCGTCTCTCGCC
AGACCGTGCGACTTTGGGCTGAAAAATTTGGCAGACACTTTGCCAAATGA

Upstream 100 bases:

>100_bases
GGCGCTTAACCTTCAGTGTCATCTGGATGACCCATGCTAGGCGGGTTGGCTTACGACAAGCTGACGGGCACCGTAACGTT
AACCGGGCATCGATCAAAAT

Downstream 100 bases:

>100_bases
TATCCGGAAGTGATCGGCCGGCAAGCTCGGCGACACATGGCATCTCGATGAAGTTGCCATCACCATCGGTGGAAAGAAAC
ACTGGCTTTGGCGCGCCGTT

Product: transposase

Products: NA

Alternate protein names: IS6 Family Transposase; Transposase-Related Protein; Transposase Pseudogene; Integrase Core Domain Protein; Integrase Catalytic Region; Transposase Protein

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MGSGGMTRFSRDYRRHRFPAQVIARAVWLYFRFPLSLRMVEDMPAARGVIVSRQTVRLWAEKFGRHFAK

Sequences:

>Translated_69_residues
MGSGGMTRFSRDYRRHRFPAQVIARAVWLYFRFPLSLRMVEDMPAARGVIVSRQTVRLWAEKFGRHFAK
>Mature_68_residues
GSGGMTRFSRDYRRHRFPAQVIARAVWLYFRFPLSLRMVEDMPAARGVIVSRQTVRLWAEKFGRHFAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8173; Mature: 8042

Theoretical pI: Translated: 12.36; Mature: 12.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGGMTRFSRDYRRHRFPAQVIARAVWLYFRFPLSLRMVEDMPAARGVIVSRQTVRLWA
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHH
EKFGRHFAK
HHHHHHCCC
>Mature Secondary Structure 
GSGGMTRFSRDYRRHRFPAQVIARAVWLYFRFPLSLRMVEDMPAARGVIVSRQTVRLWA
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHH
EKFGRHFAK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA