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The map label for this gene is 13475269

Identifier: 13475269

GI number: 13475269

Start: 5116735

End: 5117439

Strand: Direct

Name: 13475269

Synonym: mlr6301

Alternate gene names: NA

Gene position: 5116735-5117439 (Clockwise)

Preceding gene: 13475268

Following gene: 13475274

Centisome position: 72.72

GC content: 57.87

Gene sequence:

>705_bases
GTGATGTTCAGAGGCCGGCATTTCGACCGATCGGTCATCCTGGTGTGCGTTCGCTGGTATCTGGCATATGGACTGAGCCT
GCGCGATTTGAAGGAGATGATGGCCGAGCGTGGCATTAGCGTTGATCATTCGACGATCCATCGCTGGGTTGTTCACTTCT
CGCCCTTGCTGCTGGAGCGCTTCAACCGGCGCAAGCGCGCAGCGACCGGCAAATGGCATGTTGATGAAACCTACATCAAG
GTCCGAGGGCAGTGGATGTATCTCTACCGCGCTATCGACAGCGTCGGCGACACGGTCGAATTCTATTTCAGCGAACATCG
GGGTTTGCCGGCGGCCAAGCGTTTCTTCAGGAAAGCGCTGGAGCGCCATGGGCGTCCCGATCGTGTCGTCATCGATGGTA
GCCAGACCAACCAGGAGGCGATCGTTTCCTGCGATACGACACATCGATTGCAGGATCGCTGCAGGCGCCGACCGAAGCCG
ATCCGAATCCGCCAAAGCCAATACTTGAACAACCGGATCGAGCAGGACCATCGGCGGATCAAGCGCCGTGTTCGGCCGAT
GCTCGGCTTCAAATCTCCCGCAGCCGCAAGCATCATCCTCGACGGCATCGAAATGCTTCACATGATGCGCAAACGACAGG
CGAGGTTCGCCTTCAACCCAAATCCGTCATTGGCCGAGCAGTTCGATATCCTCGCCGCCGCATAA

Upstream 100 bases:

>100_bases
TCAAGTCGTTGCCAGAAGAAGGATTTTTATAGGTTCTGTTGCAAACTTTTTCGTTACGGGTTGTCTGGCAAGTGACCTCC
GACATTTTTTTAGGAGGTTT

Downstream 100 bases:

>100_bases
GCACCGCCCGCCATCTCTTCTTGCTTCAGTTCAACAAAAATTTGCAACAGAACCCCTGCTGCTTCTCGATGATGATGTTC
GGGAAAGCGCTCCAGCCTGT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MMFRGRHFDRSVILVCVRWYLAYGLSLRDLKEMMAERGISVDHSTIHRWVVHFSPLLLERFNRRKRAATGKWHVDETYIK
VRGQWMYLYRAIDSVGDTVEFYFSEHRGLPAAKRFFRKALERHGRPDRVVIDGSQTNQEAIVSCDTTHRLQDRCRRRPKP
IRIRQSQYLNNRIEQDHRRIKRRVRPMLGFKSPAAASIILDGIEMLHMMRKRQARFAFNPNPSLAEQFDILAAA

Sequences:

>Translated_234_residues
MMFRGRHFDRSVILVCVRWYLAYGLSLRDLKEMMAERGISVDHSTIHRWVVHFSPLLLERFNRRKRAATGKWHVDETYIK
VRGQWMYLYRAIDSVGDTVEFYFSEHRGLPAAKRFFRKALERHGRPDRVVIDGSQTNQEAIVSCDTTHRLQDRCRRRPKP
IRIRQSQYLNNRIEQDHRRIKRRVRPMLGFKSPAAASIILDGIEMLHMMRKRQARFAFNPNPSLAEQFDILAAA
>Mature_234_residues
MMFRGRHFDRSVILVCVRWYLAYGLSLRDLKEMMAERGISVDHSTIHRWVVHFSPLLLERFNRRKRAATGKWHVDETYIK
VRGQWMYLYRAIDSVGDTVEFYFSEHRGLPAAKRFFRKALERHGRPDRVVIDGSQTNQEAIVSCDTTHRLQDRCRRRPKP
IRIRQSQYLNNRIEQDHRRIKRRVRPMLGFKSPAAASIILDGIEMLHMMRKRQARFAFNPNPSLAEQFDILAAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27779; Mature: 27779

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFRGRHFDRSVILVCVRWYLAYGLSLRDLKEMMAERGISVDHSTIHRWVVHFSPLLLER
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FNRRKRAATGKWHVDETYIKVRGQWMYLYRAIDSVGDTVEFYFSEHRGLPAAKRFFRKAL
HHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHH
ERHGRPDRVVIDGSQTNQEAIVSCDTTHRLQDRCRRRPKPIRIRQSQYLNNRIEQDHRRI
HHCCCCCEEEECCCCCCCHHEEECCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
KRRVRPMLGFKSPAAASIILDGIEMLHMMRKRQARFAFNPNPSLAEQFDILAAA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MMFRGRHFDRSVILVCVRWYLAYGLSLRDLKEMMAERGISVDHSTIHRWVVHFSPLLLER
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FNRRKRAATGKWHVDETYIKVRGQWMYLYRAIDSVGDTVEFYFSEHRGLPAAKRFFRKAL
HHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHH
ERHGRPDRVVIDGSQTNQEAIVSCDTTHRLQDRCRRRPKPIRIRQSQYLNNRIEQDHRRI
HHCCCCCEEEECCCCCCCHHEEECCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
KRRVRPMLGFKSPAAASIILDGIEMLHMMRKRQARFAFNPNPSLAEQFDILAAA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]