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The map label for this gene is pdhR [C]

Identifier: 13475268

GI number: 13475268

Start: 5115992

End: 5116666

Strand: Direct

Name: pdhR [C]

Synonym: mlr6299

Alternate gene names: 13475268

Gene position: 5115992-5116666 (Clockwise)

Preceding gene: 13475267

Following gene: 13475269

Centisome position: 72.71

GC content: 48.15

Gene sequence:

>675_bases
TTGGCAACTCCCATCGCGCCGAAAGCAAAATGTCCAATCAGACGACAAACTTTACCCGACATCCTCGTTGAGGCTTTGCG
AGAGCGCATTCTTAGCGGCGAAATCCGGGACGGCGACTCCCTTGTGCAGGAAACTATCGCAAAAGAGTATGAGGTGAGCC
GAGTGCCAGTTCGCGAGGCGCTCCGACAATTGGAGGCGCAAGGACTGGTCTCCCGCAGAACGCATAAAGGCGCCGTCGCC
ATTTCAACGAAGCGCGAGACAGTCATCGAACTGCTAGATCTCAGGATCCTTTTAGAATGCGATATTCTATCGCATGCACT
TTCACGTTATCAGGAAACAGACCTATTGGCCGCCGAGGATATTCTCGATGAACTTGATAAAAATTATCATGACAAAGACA
TGCCTAAACGCGGGGAGATGAATTGGAAATTCCATAAATGCCTATACCTTCCGTCTGGCCGCTCAGAAACATTGTCGATT
GTTGAGAAAATACACCAACGCACCAGTCACCTCGTTCTGGTACCGCTTGTAGAATCTGGTCGAATTAATGCTTCCGTTGA
TGGGCATCGAGAGCTTCTACGTCTATGCACTGAGCGCAATTCCACCGCAATAGACTGTCTTAGACGTCATATATATAGTT
TTATCAAGTCGTTGCCAGAAGAAGGATTTTTATAG

Upstream 100 bases:

>100_bases
CATCGCCGTGGTGGCTTGAGGCCAGGCCGCCACTTATCCGCACTTCAAACAATGTGACAGCACCATTCGAACGAATGCAT
GCACGAAGAGGGACCAAGGG

Downstream 100 bases:

>100_bases
GTTCTGTTGCAAACTTTTTCGTTACGGGTTGTCTGGCAAGTGACCTCCGACATTTTTTTAGGAGGTTTGTGATGTTCAGA
GGCCGGCATTTCGACCGATC

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; GntR-Family Transcriptional Regulator; GntR Family Regulatory Protein; Transcription Regulator; Regulatory Protein GntR HTH; Transcriptional Regulator GntR; GntR Family Regulatory; GntR-Family Regulatory Protein; Regulatory Protein GntR; Biotin Regulatory Protein BioR; Transcriptional Regulator Gntr Family; GntR Family Transcription Regulator; Transcription Regulator Protein; Regulator PutR For Proline Utilization GntR Family; Glycosyltransferase; Transcription Regulator AsnC

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MATPIAPKAKCPIRRQTLPDILVEALRERILSGEIRDGDSLVQETIAKEYEVSRVPVREALRQLEAQGLVSRRTHKGAVA
ISTKRETVIELLDLRILLECDILSHALSRYQETDLLAAEDILDELDKNYHDKDMPKRGEMNWKFHKCLYLPSGRSETLSI
VEKIHQRTSHLVLVPLVESGRINASVDGHRELLRLCTERNSTAIDCLRRHIYSFIKSLPEEGFL

Sequences:

>Translated_224_residues
MATPIAPKAKCPIRRQTLPDILVEALRERILSGEIRDGDSLVQETIAKEYEVSRVPVREALRQLEAQGLVSRRTHKGAVA
ISTKRETVIELLDLRILLECDILSHALSRYQETDLLAAEDILDELDKNYHDKDMPKRGEMNWKFHKCLYLPSGRSETLSI
VEKIHQRTSHLVLVPLVESGRINASVDGHRELLRLCTERNSTAIDCLRRHIYSFIKSLPEEGFL
>Mature_223_residues
ATPIAPKAKCPIRRQTLPDILVEALRERILSGEIRDGDSLVQETIAKEYEVSRVPVREALRQLEAQGLVSRRTHKGAVAI
STKRETVIELLDLRILLECDILSHALSRYQETDLLAAEDILDELDKNYHDKDMPKRGEMNWKFHKCLYLPSGRSETLSIV
EKIHQRTSHLVLVPLVESGRINASVDGHRELLRLCTERNSTAIDCLRRHIYSFIKSLPEEGFL

Specific function: Transcriptional Repressor For The Pyruvate Dehydrogenase Complex Genes ACEef And Lpd. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25613; Mature: 25482

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPIAPKAKCPIRRQTLPDILVEALRERILSGEIRDGDSLVQETIAKEYEVSRVPVREA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
LRQLEAQGLVSRRTHKGAVAISTKRETVIELLDLRILLECDILSHALSRYQETDLLAAED
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDELDKNYHDKDMPKRGEMNWKFHKCLYLPSGRSETLSIVEKIHQRTSHLVLVPLVESG
HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCC
RINASVDGHRELLRLCTERNSTAIDCLRRHIYSFIKSLPEEGFL
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATPIAPKAKCPIRRQTLPDILVEALRERILSGEIRDGDSLVQETIAKEYEVSRVPVREA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
LRQLEAQGLVSRRTHKGAVAISTKRETVIELLDLRILLECDILSHALSRYQETDLLAAED
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDELDKNYHDKDMPKRGEMNWKFHKCLYLPSGRSETLSIVEKIHQRTSHLVLVPLVESG
HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCC
RINASVDGHRELLRLCTERNSTAIDCLRRHIYSFIKSLPEEGFL
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA