| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475221
Identifier: 13475221
GI number: 13475221
Start: 5064786
End: 5065727
Strand: Reverse
Name: 13475221
Synonym: mll6249
Alternate gene names: NA
Gene position: 5065727-5064786 (Counterclockwise)
Preceding gene: 13475222
Following gene: 13475219
Centisome position: 72.0
GC content: 60.51
Gene sequence:
>942_bases GTGGTCGCAAGCCACACTATACGCAGGCCTTTCGATTTGCATGGTCATTTCCGCACTTACCGCGCCGCTGGGGGCGCTTT TGATCGCGCGATTTGGGCTCCGACAGACGACCATATGCGTTTTGTCCATCCTGCTCGTGACGCTGATCCTGTCTGGTCTG GCAGGCTCGGCGAGCGAGCTGGCTCTTATCTGGGTAGTCGCTGCGGCAGCAGGTGGCTGTCTCAACCCAATCGTCGTCGG ATCGATCAGTGTCCGCAGCACTGCGCGACGGCGTCGAGTTTGTTTCTATCCTGCTCCGCCGCGGCACCCATGCTCGCTCT TCCCCTCTTCTCGTTGCTGATCGCAGGCTTTGGATGGTTTACCGCCATTTCTGTCGCGGCAGGTGCGATTGCCGCCACCA TTTTCGGCGTCGACCTCGTGATCCCGAAGACCTCTTCGCGCTCTCAGGACGGAGGCGGTCTTGGTCCCTCGTTCGAGCCC CTTGGAGCCGTGGCTGGGGACAGGCTGTTCTGGATGCTGGCGTTCCTGACATGCGTTTGCGGCGTGACGTCGTCGGGATT GGTTGGTAACCATCTCATCAGCATCTGTCGGGCGGCTGGCCTGCCTGCAACGGCGGGTGTCGAGGCTGTCGCGCTGACTG GAATCATCGCAGCGTTTGGCGGGCTGGCATTCGGCGTAGCCGCTGATCGCTTCACCGGCATCCGGCTTCTCGCGGCCTAC TACATCGCACGCGCGCTTCTTCTGTTCTGGTTGCCGCAGAGCTCTTTGAGCTTTGAAACGCTTTCCCAGTTCGCGGTGCT CTTTGGCTTGGACGTATGCGACGTCTCCGCCCCATTGATTTTCTTGTTGCAACGGTCAGGTGGAGCGCTTGCAGCTGGTC CTATGAGCACGTTGGGGAATCCCGGACGTGCTCATTGTGATGCGCTGATCCGTTGCGCATAG
Upstream 100 bases:
>100_bases CGCACGCCATCATCATAGCCAGTGCGGGTGCGGCCGCAGTCAGCGCTGCCGTCAATGCGCTGCCGATCGTCTTCACCGAT GTCCTTGTGCGCGAACTTCG
Downstream 100 bases:
>100_bases GCCCAGGGCATGAGGGCGTCGATGTCTTTGGCGAGGTGGCCATTTGCGAGGCTGATGAAGAGATCGCGCAGGTAGGCGTA TGGTTCAACGCGGTTCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MVASHTIRRPFDLHGHFRTYRAAGGAFDRAIWAPTDDHMRFVHPARDADPVWSGRLGERAGSYLGSRCGSRWLSQPNRRR IDQCPQHCATASSLFLSCSAAAPMLALPLFSLLIAGFGWFTAISVAAGAIAATIFGVDLVIPKTSSRSQDGGGLGPSFEP LGAVAGDRLFWMLAFLTCVCGVTSSGLVGNHLISICRAAGLPATAGVEAVALTGIIAAFGGLAFGVAADRFTGIRLLAAY YIARALLLFWLPQSSLSFETLSQFAVLFGLDVCDVSAPLIFLLQRSGGALAAGPMSTLGNPGRAHCDALIRCA
Sequences:
>Translated_313_residues MVASHTIRRPFDLHGHFRTYRAAGGAFDRAIWAPTDDHMRFVHPARDADPVWSGRLGERAGSYLGSRCGSRWLSQPNRRR IDQCPQHCATASSLFLSCSAAAPMLALPLFSLLIAGFGWFTAISVAAGAIAATIFGVDLVIPKTSSRSQDGGGLGPSFEP LGAVAGDRLFWMLAFLTCVCGVTSSGLVGNHLISICRAAGLPATAGVEAVALTGIIAAFGGLAFGVAADRFTGIRLLAAY YIARALLLFWLPQSSLSFETLSQFAVLFGLDVCDVSAPLIFLLQRSGGALAAGPMSTLGNPGRAHCDALIRCA >Mature_313_residues MVASHTIRRPFDLHGHFRTYRAAGGAFDRAIWAPTDDHMRFVHPARDADPVWSGRLGERAGSYLGSRCGSRWLSQPNRRR IDQCPQHCATASSLFLSCSAAAPMLALPLFSLLIAGFGWFTAISVAAGAIAATIFGVDLVIPKTSSRSQDGGGLGPSFEP LGAVAGDRLFWMLAFLTCVCGVTSSGLVGNHLISICRAAGLPATAGVEAVALTGIIAAFGGLAFGVAADRFTGIRLLAAY YIARALLLFWLPQSSLSFETLSQFAVLFGLDVCDVSAPLIFLLQRSGGALAAGPMSTLGNPGRAHCDALIRCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32885; Mature: 32885
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVASHTIRRPFDLHGHFRTYRAAGGAFDRAIWAPTDDHMRFVHPARDADPVWSGRLGERA CCCCCCCCCCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH GSYLGSRCGSRWLSQPNRRRIDQCPQHCATASSLFLSCSAAAPMLALPLFSLLIAGFGWF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TAISVAAGAIAATIFGVDLVIPKTSSRSQDGGGLGPSFEPLGAVAGDRLFWMLAFLTCVC HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GVTSSGLVGNHLISICRAAGLPATAGVEAVALTGIIAAFGGLAFGVAADRFTGIRLLAAY CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIARALLLFWLPQSSLSFETLSQFAVLFGLDVCDVSAPLIFLLQRSGGALAAGPMSTLGN HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEECCCHHHCCC PGRAHCDALIRCA CCHHHHHHHHHCC >Mature Secondary Structure MVASHTIRRPFDLHGHFRTYRAAGGAFDRAIWAPTDDHMRFVHPARDADPVWSGRLGERA CCCCCCCCCCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH GSYLGSRCGSRWLSQPNRRRIDQCPQHCATASSLFLSCSAAAPMLALPLFSLLIAGFGWF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TAISVAAGAIAATIFGVDLVIPKTSSRSQDGGGLGPSFEPLGAVAGDRLFWMLAFLTCVC HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GVTSSGLVGNHLISICRAAGLPATAGVEAVALTGIIAAFGGLAFGVAADRFTGIRLLAAY CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIARALLLFWLPQSSLSFETLSQFAVLFGLDVCDVSAPLIFLLQRSGGALAAGPMSTLGN HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCEECCCHHHCCC PGRAHCDALIRCA CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA