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The map label for this gene is 13475198

Identifier: 13475198

GI number: 13475198

Start: 5038631

End: 5040736

Strand: Reverse

Name: 13475198

Synonym: mll6222

Alternate gene names: NA

Gene position: 5040736-5038631 (Counterclockwise)

Preceding gene: 13475199

Following gene: 13475197

Centisome position: 71.64

GC content: 59.83

Gene sequence:

>2106_bases
ATGTTGGCTATTCCGAGCAGTTCTGACGAGCGGCTCACGACCGTCCGGCGTTCAAAGTTCGCTTACGTGTATGTGCGCCA
ATCCTCGATAAACCAGGTGCGCCACCATCAGGAAAGCACCGAACTTCAGTACAGCTTGGTGGACCGCGCCGTCAGGTTGG
GCTGGCCGCCGGACCGTGTAGTCGTCATCGATGAGGATCTTGGAAAATCGGGAAACGGCCAAGTCGAGCGTGGCGGCTTC
CAACGGCTCATCGCCGAGATCGGGCTCGGCAACGCCGGTCTGGTGGTCAGCCTCGATGCATCTCGATTGGCGCGCAACAA
CCGGGATTGGCATCAACTCCTCGAGTTGTGTTCATTGTTCGGCGTTATCATCGCCGATGGCGAGCGCCTCTACGATCCCT
GCGCCTATCACGACCGCCTACTGTTAGGGCTCTCGGGGATCATGAGTGAAGCGGAGTTGCACCAGATCCGCATCCGCCTG
CATCAAGGGGAGCGGCAGAAGGCTGCGCGGGGCGAGCTTCGCATACCGCTGCCAGGTGGCTTGACCTACAACCGCTCCGG
CCAGATCGTGTTCAACCCTGATGAAGAGGTTCAGGCTCGGCTGCGTCTGATCTTCGACAAATTTAGAGAGCTTGGGACCG
CGCGACGCGTTATGCGTTACCTGCGCACGCATGACCTACGTGTACCGGTGCGGCCGCTTCGCGGGCCGGCGCCCCATGAG
CTGGTGTGGCGAGACGCCACCATCGCCCATGTCCATCATATTTTGCACAACCCGGCCTATGCCGGCGCATATGTCTACGG
CCGGCGCCGAATAAATGCGGTCCGCCAAGGTCCAGGTTCGCACCGCGCAACCTCGAAGGTGGCCATTGACGACTGGGAGG
TTTGCATCAAAGACGCACACCCTGGTTATATTAACTGGGAGGAGTTCATGGCCAATCAGAGACGCCTCGCCGACAACACC
AATCAATACGAGGCCGGCCACCGCGGCGCGCCACGCAAGGGCATTGCTTTGCTGCAGGGCTTAGCGGTCTGCGGCCAGTG
CGGACGGCGGATGACCGTGCGCTATAGCGGCCCCGACAGTGCATGCCCCGTCTACTGCTGCCTGGCGGACCGCAACCAGA
CCGGCAGCTCTCTCTGTCAGGAGGTTCGGGCGCCCGCAGTAGATGAACTGGTCGCCCGGATCCTCCTGAAGGCGTTGGAA
CCTGACCAAATCGCCATCGCCATCGCTGCGCTCGACGAGATTGCGGAGGAAACGCGGAGCCTCGAGAAACAATGGGCGCT
ACGGCGGGAACGTGCGCGGTATGACGCCGAGCGGGCTCGACGACAATACGACACCGTGGAACCGGAAAATCGTCTCGTCG
CCAGAACCCTGGAAAAGGCATGGGAAGACAAGCTGCGCTTGGTCGATGAGATCGAGCAGGAATATCGTCGGTGGAGAGAC
CGAGAGCCCTTGGTGTTACAGGCACAGGATCACGCGGCGCTTCAGGAACTCGCCGAGAATTTGCCGGCTATCTGGCACTC
AGAAACCACCCAGCCAGAAGACCGCAAACGTATCTTGCGCTTCATCGTGCAGGAGGTCGTTCTCGACCAGAAGAAGATAC
GCGGCCAGGTCGCCATCAGGATTCTTTGGCAGACCGGCGCAACCAGCGAACATCAAATCCAACGCCGAGTTCAATCTTAC
GATCGAGACTATGGCGAACTTGAGCTTGTGCGTGAGCGGATCACGCAACTCAATGCTGCGGGCGATATGGACAGGCAAAT
CGCTAAAATATTGAATGAAGAGGGCGTCCGCTCGGCGCGAGGCAAGCTGTTCAGCTATGAGAACATCTGGCTCTTACGCC
ACCGTTGGGGAATCCCCACAGCCAAGATCAACGGCGTCGCAGCCAATCCGCCGCGCTGGCCTGATGGAACCTACTCTGTA
CAGGGCGCAGCCGCTGCAATCGGCGTGACGGCTCAAACCATCTTCGACTACCTCGCCCAGGGCCTTGTCCACGGTCGGCA
AAGCACGAAAGGCCAGCCTTGGCAGATCAGCCTTTCCAGCGACCAGATCGATCAACTTCAACGCCGACTGCAACGGACCA
GACGATCAAGGAAAGGTGCATCATGA

Upstream 100 bases:

>100_bases
AACAATCTCCCACCAGTATCTCAGCACCAAGTCGCGCAGATGCTCGCGACTCTGATCCGCCGGATGCCGCCGAACGCGCC
AGCGGCGAGGGAGCGGTTTG

Downstream 100 bases:

>100_bases
AGCATTCGCGAATCCAGCCATGACGCTCGCCGCGGTGGATCGCCTCGTCCATCACGCCACAATCTTCGAGCTGAATGTCG
AGAGCTATCGGCGGCGCGAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MLAIPSSSDERLTTVRRSKFAYVYVRQSSINQVRHHQESTELQYSLVDRAVRLGWPPDRVVVIDEDLGKSGNGQVERGGF
QRLIAEIGLGNAGLVVSLDASRLARNNRDWHQLLELCSLFGVIIADGERLYDPCAYHDRLLLGLSGIMSEAELHQIRIRL
HQGERQKAARGELRIPLPGGLTYNRSGQIVFNPDEEVQARLRLIFDKFRELGTARRVMRYLRTHDLRVPVRPLRGPAPHE
LVWRDATIAHVHHILHNPAYAGAYVYGRRRINAVRQGPGSHRATSKVAIDDWEVCIKDAHPGYINWEEFMANQRRLADNT
NQYEAGHRGAPRKGIALLQGLAVCGQCGRRMTVRYSGPDSACPVYCCLADRNQTGSSLCQEVRAPAVDELVARILLKALE
PDQIAIAIAALDEIAEETRSLEKQWALRRERARYDAERARRQYDTVEPENRLVARTLEKAWEDKLRLVDEIEQEYRRWRD
REPLVLQAQDHAALQELAENLPAIWHSETTQPEDRKRILRFIVQEVVLDQKKIRGQVAIRILWQTGATSEHQIQRRVQSY
DRDYGELELVRERITQLNAAGDMDRQIAKILNEEGVRSARGKLFSYENIWLLRHRWGIPTAKINGVAANPPRWPDGTYSV
QGAAAAIGVTAQTIFDYLAQGLVHGRQSTKGQPWQISLSSDQIDQLQRRLQRTRRSRKGAS

Sequences:

>Translated_701_residues
MLAIPSSSDERLTTVRRSKFAYVYVRQSSINQVRHHQESTELQYSLVDRAVRLGWPPDRVVVIDEDLGKSGNGQVERGGF
QRLIAEIGLGNAGLVVSLDASRLARNNRDWHQLLELCSLFGVIIADGERLYDPCAYHDRLLLGLSGIMSEAELHQIRIRL
HQGERQKAARGELRIPLPGGLTYNRSGQIVFNPDEEVQARLRLIFDKFRELGTARRVMRYLRTHDLRVPVRPLRGPAPHE
LVWRDATIAHVHHILHNPAYAGAYVYGRRRINAVRQGPGSHRATSKVAIDDWEVCIKDAHPGYINWEEFMANQRRLADNT
NQYEAGHRGAPRKGIALLQGLAVCGQCGRRMTVRYSGPDSACPVYCCLADRNQTGSSLCQEVRAPAVDELVARILLKALE
PDQIAIAIAALDEIAEETRSLEKQWALRRERARYDAERARRQYDTVEPENRLVARTLEKAWEDKLRLVDEIEQEYRRWRD
REPLVLQAQDHAALQELAENLPAIWHSETTQPEDRKRILRFIVQEVVLDQKKIRGQVAIRILWQTGATSEHQIQRRVQSY
DRDYGELELVRERITQLNAAGDMDRQIAKILNEEGVRSARGKLFSYENIWLLRHRWGIPTAKINGVAANPPRWPDGTYSV
QGAAAAIGVTAQTIFDYLAQGLVHGRQSTKGQPWQISLSSDQIDQLQRRLQRTRRSRKGAS
>Mature_701_residues
MLAIPSSSDERLTTVRRSKFAYVYVRQSSINQVRHHQESTELQYSLVDRAVRLGWPPDRVVVIDEDLGKSGNGQVERGGF
QRLIAEIGLGNAGLVVSLDASRLARNNRDWHQLLELCSLFGVIIADGERLYDPCAYHDRLLLGLSGIMSEAELHQIRIRL
HQGERQKAARGELRIPLPGGLTYNRSGQIVFNPDEEVQARLRLIFDKFRELGTARRVMRYLRTHDLRVPVRPLRGPAPHE
LVWRDATIAHVHHILHNPAYAGAYVYGRRRINAVRQGPGSHRATSKVAIDDWEVCIKDAHPGYINWEEFMANQRRLADNT
NQYEAGHRGAPRKGIALLQGLAVCGQCGRRMTVRYSGPDSACPVYCCLADRNQTGSSLCQEVRAPAVDELVARILLKALE
PDQIAIAIAALDEIAEETRSLEKQWALRRERARYDAERARRQYDTVEPENRLVARTLEKAWEDKLRLVDEIEQEYRRWRD
REPLVLQAQDHAALQELAENLPAIWHSETTQPEDRKRILRFIVQEVVLDQKKIRGQVAIRILWQTGATSEHQIQRRVQSY
DRDYGELELVRERITQLNAAGDMDRQIAKILNEEGVRSARGKLFSYENIWLLRHRWGIPTAKINGVAANPPRWPDGTYSV
QGAAAAIGVTAQTIFDYLAQGLVHGRQSTKGQPWQISLSSDQIDQLQRRLQRTRRSRKGAS

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 79990; Mature: 79990

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIPSSSDERLTTVRRSKFAYVYVRQSSINQVRHHQESTELQYSLVDRAVRLGWPPDRV
CCCCCCCCCHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VVIDEDLGKSGNGQVERGGFQRLIAEIGLGNAGLVVSLDASRLARNNRDWHQLLELCSLF
EEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHH
GVIIADGERLYDPCAYHDRLLLGLSGIMSEAELHQIRIRLHQGERQKAARGELRIPLPGG
HHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCC
LTYNRSGQIVFNPDEEVQARLRLIFDKFRELGTARRVMRYLRTHDLRVPVRPLRGPAPHE
CEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LVWRDATIAHVHHILHNPAYAGAYVYGRRRINAVRQGPGSHRATSKVAIDDWEVCIKDAH
EEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCCCC
PGYINWEEFMANQRRLADNTNQYEAGHRGAPRKGIALLQGLAVCGQCGRRMTVRYSGPDS
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC
ACPVYCCLADRNQTGSSLCQEVRAPAVDELVARILLKALEPDQIAIAIAALDEIAEETRS
CCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LEKQWALRRERARYDAERARRQYDTVEPENRLVARTLEKAWEDKLRLVDEIEQEYRRWRD
HHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
REPLVLQAQDHAALQELAENLPAIWHSETTQPEDRKRILRFIVQEVVLDQKKIRGQVAIR
CCCEEEEECHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ILWQTGATSEHQIQRRVQSYDRDYGELELVRERITQLNAAGDMDRQIAKILNEEGVRSAR
EEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
GKLFSYENIWLLRHRWGIPTAKINGVAANPPRWPDGTYSVQGAAAAIGVTAQTIFDYLAQ
CCEEEECCEEEEEEECCCCCCEECCEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
GLVHGRQSTKGQPWQISLSSDQIDQLQRRLQRTRRSRKGAS
HHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLAIPSSSDERLTTVRRSKFAYVYVRQSSINQVRHHQESTELQYSLVDRAVRLGWPPDRV
CCCCCCCCCHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VVIDEDLGKSGNGQVERGGFQRLIAEIGLGNAGLVVSLDASRLARNNRDWHQLLELCSLF
EEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHH
GVIIADGERLYDPCAYHDRLLLGLSGIMSEAELHQIRIRLHQGERQKAARGELRIPLPGG
HHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCC
LTYNRSGQIVFNPDEEVQARLRLIFDKFRELGTARRVMRYLRTHDLRVPVRPLRGPAPHE
CEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LVWRDATIAHVHHILHNPAYAGAYVYGRRRINAVRQGPGSHRATSKVAIDDWEVCIKDAH
EEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHCCCC
PGYINWEEFMANQRRLADNTNQYEAGHRGAPRKGIALLQGLAVCGQCGRRMTVRYSGPDS
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC
ACPVYCCLADRNQTGSSLCQEVRAPAVDELVARILLKALEPDQIAIAIAALDEIAEETRS
CCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LEKQWALRRERARYDAERARRQYDTVEPENRLVARTLEKAWEDKLRLVDEIEQEYRRWRD
HHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
REPLVLQAQDHAALQELAENLPAIWHSETTQPEDRKRILRFIVQEVVLDQKKIRGQVAIR
CCCEEEEECHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ILWQTGATSEHQIQRRVQSYDRDYGELELVRERITQLNAAGDMDRQIAKILNEEGVRSAR
EEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
GKLFSYENIWLLRHRWGIPTAKINGVAANPPRWPDGTYSVQGAAAAIGVTAQTIFDYLAQ
CCEEEECCEEEEEEECCCCCCEECCEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
GLVHGRQSTKGQPWQISLSSDQIDQLQRRLQRTRRSRKGAS
HHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]