Click here to switch to the map view.

The map label for this gene is 13475174

Identifier: 13475174

GI number: 13475174

Start: 5013328

End: 5014887

Strand: Reverse

Name: 13475174

Synonym: mll6192

Alternate gene names: NA

Gene position: 5014887-5013328 (Counterclockwise)

Preceding gene: 13475175

Following gene: 13475166

Centisome position: 71.27

GC content: 60.96

Gene sequence:

>1560_bases
ATGGCACTCGCTAACTTCATCGACCGCGCCGCCACGGCGGCATCTCAGGTCCTAGCCGATTTTCATCTGGAGGACTTTAA
AGCAGCTCTTGAAAAGCAGGTCGTGGCCGTCGCCTTTGACGATCAAGCCGCTTCCTGCGCCGAAGGCCAGGCGACACTAG
ATCTTGCGGTGAGGTTGCTCGCCAGGCTCTATCCAGTTCTGGCGATACTCCCGCTGGGCAGCGCGGCAAGCTTTCAAGCC
CAAGCGCTGGAGCGCTTGGCAAAGTCGATAAATCCAAAAGTTGGCATCCGGCGTTCCGGCAAGTCTGCCACCATCTGCGT
AGTTGCAGGGGTGACGCGCCCACCACTCCGGTGCCCGACCTTTTTCATGGGATCGGACGGTTGGGCGGCAAAGCTGTCGC
GTACGGACCCGGTGGGCTCCGGCTCGAGTTTGCTGCCCTATGGAGCTGGCGCCGCCAGTTGCTTCGGCGCCGCCAACGTC
TTTCGAACCATCTTCGCCGCCCAGCTGACCGGCGCCGAGTTAGACGAAACCATCGACCTCTCGTTATACAGCTACGACAA
GACCAAAGCCGGCGAGGCAGGCCCGATCGACATACCTGTCGACCTTGGCGAAACGCACCTCGTTGGGCTCGGTGCGATAG
GCCATGGCTCGCTTTGGGCGCTAGCGAGACAACCCGGTCTCACGGGTCGTCTGCATGTAATCGATCACGAAGCAATCGAA
CTCTCAAACCTGCAGCGCTACGTATTGGCCGGCCAGGCGGAGATTGGCATGTCCAAGGCGGTTCTTGCAGCCACCGCCCT
TAGATCGACGGCCATTGGGGTCGAGGCGCACCCGCTGACGTGGGCAGAATATGTTGCGCGCCACGGCGACTGGGTCTTCG
ACCGAGTGGGTGTGGCGCTTGACACCGCCGCCGACCGTCTGGCGGTCCAAGGTGCTCTGCCCCGATGGATCGCGAATGCC
TGGACGCAGGAGCACGACCTCGGCATCTCGCGGCACGGGTTCGATGACGGCCAAGCTTGCCTTTGTTGCATGTACCTGCC
GTCCGGGAAATCCAAGGACGAGCACCATCTGATTGCCGAGGAACTCGGAATACCGGAAGCACACGAGCAGGTGAAAACGC
TCCTGCAGACCAATGCCGGAGTTCCCAACGACTTTGTAGTTCGGGTGGCTACAGCGATGGCTGTGCCGTTTGAACCGCTA
GCCCCGTTTGTTGGCCAGCCCCTGCGTTCCTTTTATCAGCAGGCTATCTGCGGCGGTCTGGTGTTCCAGCTCAGTGATGG
AAGTCGCCGCGTTCGAACCGTGGTTCCGATGGCCTTCCAGTCAGCGCTTGCCGGGATTATGCTTGCCGCCGAGCTCGTCA
AACACAGCGCGGGTTTTCCCGTGGGCCCGACGACGAGCACTCGGGTGAATCTTCTGCGCCCACTTGGCTCCCGCTTGCAC
GATCCGAAGGCCAAGGATTCCAGCGGCCGCTGCATCTGTAGCGATGACGATTTCATTGCCGCTTACAGGCGCAAATACGG
CAAGAGCATCGTACAGCTAAGCGATGTCTCCGCCGCCTAA

Upstream 100 bases:

>100_bases
TTTTGCTCGAGTCGCCGCCTATCGGCTCGACGGAAAAGCCAACTGGAATGCGCTCCCTTCCGCGGCACTGTCGCGAATGA
TCACAATAACGAGTTGAACA

Downstream 100 bases:

>100_bases
GCAGACGCGCGAATGTCTCCGTTGCCGCCGGGCGGCGATGTGCGCGCCACTACGAAACCCCATGTCCGCTCCTCTGCCGT
CCGAGGGTCCATGAGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MALANFIDRAATAASQVLADFHLEDFKAALEKQVVAVAFDDQAASCAEGQATLDLAVRLLARLYPVLAILPLGSAASFQA
QALERLAKSINPKVGIRRSGKSATICVVAGVTRPPLRCPTFFMGSDGWAAKLSRTDPVGSGSSLLPYGAGAASCFGAANV
FRTIFAAQLTGAELDETIDLSLYSYDKTKAGEAGPIDIPVDLGETHLVGLGAIGHGSLWALARQPGLTGRLHVIDHEAIE
LSNLQRYVLAGQAEIGMSKAVLAATALRSTAIGVEAHPLTWAEYVARHGDWVFDRVGVALDTAADRLAVQGALPRWIANA
WTQEHDLGISRHGFDDGQACLCCMYLPSGKSKDEHHLIAEELGIPEAHEQVKTLLQTNAGVPNDFVVRVATAMAVPFEPL
APFVGQPLRSFYQQAICGGLVFQLSDGSRRVRTVVPMAFQSALAGIMLAAELVKHSAGFPVGPTTSTRVNLLRPLGSRLH
DPKAKDSSGRCICSDDDFIAAYRRKYGKSIVQLSDVSAA

Sequences:

>Translated_519_residues
MALANFIDRAATAASQVLADFHLEDFKAALEKQVVAVAFDDQAASCAEGQATLDLAVRLLARLYPVLAILPLGSAASFQA
QALERLAKSINPKVGIRRSGKSATICVVAGVTRPPLRCPTFFMGSDGWAAKLSRTDPVGSGSSLLPYGAGAASCFGAANV
FRTIFAAQLTGAELDETIDLSLYSYDKTKAGEAGPIDIPVDLGETHLVGLGAIGHGSLWALARQPGLTGRLHVIDHEAIE
LSNLQRYVLAGQAEIGMSKAVLAATALRSTAIGVEAHPLTWAEYVARHGDWVFDRVGVALDTAADRLAVQGALPRWIANA
WTQEHDLGISRHGFDDGQACLCCMYLPSGKSKDEHHLIAEELGIPEAHEQVKTLLQTNAGVPNDFVVRVATAMAVPFEPL
APFVGQPLRSFYQQAICGGLVFQLSDGSRRVRTVVPMAFQSALAGIMLAAELVKHSAGFPVGPTTSTRVNLLRPLGSRLH
DPKAKDSSGRCICSDDDFIAAYRRKYGKSIVQLSDVSAA
>Mature_518_residues
ALANFIDRAATAASQVLADFHLEDFKAALEKQVVAVAFDDQAASCAEGQATLDLAVRLLARLYPVLAILPLGSAASFQAQ
ALERLAKSINPKVGIRRSGKSATICVVAGVTRPPLRCPTFFMGSDGWAAKLSRTDPVGSGSSLLPYGAGAASCFGAANVF
RTIFAAQLTGAELDETIDLSLYSYDKTKAGEAGPIDIPVDLGETHLVGLGAIGHGSLWALARQPGLTGRLHVIDHEAIEL
SNLQRYVLAGQAEIGMSKAVLAATALRSTAIGVEAHPLTWAEYVARHGDWVFDRVGVALDTAADRLAVQGALPRWIANAW
TQEHDLGISRHGFDDGQACLCCMYLPSGKSKDEHHLIAEELGIPEAHEQVKTLLQTNAGVPNDFVVRVATAMAVPFEPLA
PFVGQPLRSFYQQAICGGLVFQLSDGSRRVRTVVPMAFQSALAGIMLAAELVKHSAGFPVGPTTSTRVNLLRPLGSRLHD
PKAKDSSGRCICSDDDFIAAYRRKYGKSIVQLSDVSAA

Specific function: Unknown

COG id: COG0476

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 55089; Mature: 54957

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALANFIDRAATAASQVLADFHLEDFKAALEKQVVAVAFDDQAASCAEGQATLDLAVRLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHH
ARLYPVLAILPLGSAASFQAQALERLAKSINPKVGIRRSGKSATICVVAGVTRPPLRCPT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCCCCCCCE
FFMGSDGWAAKLSRTDPVGSGSSLLPYGAGAASCFGAANVFRTIFAAQLTGAELDETIDL
EEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
SLYSYDKTKAGEAGPIDIPVDLGETHLVGLGAIGHGSLWALARQPGLTGRLHVIDHEAIE
EEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEHHHCCCCCCCEEEEEECCHHH
LSNLQRYVLAGQAEIGMSKAVLAATALRSTAIGVEAHPLTWAEYVARHGDWVFDRVGVAL
HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHCHHH
DTAADRLAVQGALPRWIANAWTQEHDLGISRHGFDDGQACLCCMYLPSGKSKDEHHLIAE
HHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
ELGIPEAHEQVKTLLQTNAGVPNDFVVRVATAMAVPFEPLAPFVGQPLRSFYQQAICGGL
HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCE
VFQLSDGSRRVRTVVPMAFQSALAGIMLAAELVKHSAGFPVGPTTSTRVNLLRPLGSRLH
EEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
DPKAKDSSGRCICSDDDFIAAYRRKYGKSIVQLSDVSAA
CCCCCCCCCCEEECCCHHHHHHHHHHCCHHEEECCCCCC
>Mature Secondary Structure 
ALANFIDRAATAASQVLADFHLEDFKAALEKQVVAVAFDDQAASCAEGQATLDLAVRLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHH
ARLYPVLAILPLGSAASFQAQALERLAKSINPKVGIRRSGKSATICVVAGVTRPPLRCPT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCCCCCCCE
FFMGSDGWAAKLSRTDPVGSGSSLLPYGAGAASCFGAANVFRTIFAAQLTGAELDETIDL
EEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
SLYSYDKTKAGEAGPIDIPVDLGETHLVGLGAIGHGSLWALARQPGLTGRLHVIDHEAIE
EEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEHHHCCCCCCCEEEEEECCHHH
LSNLQRYVLAGQAEIGMSKAVLAATALRSTAIGVEAHPLTWAEYVARHGDWVFDRVGVAL
HHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHCHHH
DTAADRLAVQGALPRWIANAWTQEHDLGISRHGFDDGQACLCCMYLPSGKSKDEHHLIAE
HHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
ELGIPEAHEQVKTLLQTNAGVPNDFVVRVATAMAVPFEPLAPFVGQPLRSFYQQAICGGL
HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCE
VFQLSDGSRRVRTVVPMAFQSALAGIMLAAELVKHSAGFPVGPTTSTRVNLLRPLGSRLH
EEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
DPKAKDSSGRCICSDDDFIAAYRRKYGKSIVQLSDVSAA
CCCCCCCCCCEEECCCHHHHHHHHHHCCHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]