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The map label for this gene is paiB [H]

Identifier: 13475160

GI number: 13475160

Start: 4997112

End: 4997735

Strand: Direct

Name: paiB [H]

Synonym: mlr6176

Alternate gene names: 13475160

Gene position: 4997112-4997735 (Clockwise)

Preceding gene: 13475159

Following gene: 13475161

Centisome position: 71.02

GC content: 66.35

Gene sequence:

>624_bases
ATGTACATCCCTCCCGCTTTCCGCGACGACGACAAGGAATGCCTGCGCGCGACCATTCGCGCGGCGCTGCTGGCGAACTT
CGTTACCGTCACGGCGGAAGGGCCGCTCGCAACGCCACTGCCCCTCTTCCTTGACGAGAGCGAGGGCGAGCACGGCGTGA
TCTACGGGCACCTGGCGAAGGCCAATCCCCAGTGCCGTGTTCCGCCGCTGGGCGACGGCTTGGCCATCTTCATGGGGCCG
GACGCTTACGTGACGCCGGCATGGTATGCGACCAAGCGGGAAACCGGGAAGGTCGTCCCGACCTGGAATTACGTCGCCGT
CCACGCCTATGGCCCGGTCGAGTTCTTCGAGGATGCGGGAAGATTGCTGGACGTCGTGAATCGGCTGACCGACCACCACG
AGGGCGAGCGCGCCTCGCCTTGGGCGGTGTCGGACGCGCCGCCGGATTTTATACAGGCGCAACTCCGCGGAATCGTCGGC
CTGCGCATGCCAATCACGAGGCTGGAGGGCAAGCGCAAAATGAGCCAGAACCGGAACGCGGCCGACCGCGCTGGCGTGGC
GGCGGGCCTTGCGGCGAGCGAGCGGGCATCTGACCGCGACGTCGCCGCTCTCATCCCAAAATAA

Upstream 100 bases:

>100_bases
GCCATCTTTCACCAACTGGACTACCTCAATAGCTTCTGACTGGCTGTTTCCAATAGGCCAGCTTGCCGATACCTGACTTG
GTAACGCAAGGAGTTTCGCG

Downstream 100 bases:

>100_bases
TCATGAACTTCGTCGGAATCGACCATCATGCCAGAACTGACCCCACTCGCCCTGTACCTCGCCGCGGCCTCCGTGCTCGC
CATCACCCCCGGTCCGGGCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAKANPQCRVPPLGDGLAIFMGP
DAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDAGRLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVG
LRMPITRLEGKRKMSQNRNAADRAGVAAGLAASERASDRDVAALIPK

Sequences:

>Translated_207_residues
MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAKANPQCRVPPLGDGLAIFMGP
DAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDAGRLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVG
LRMPITRLEGKRKMSQNRNAADRAGVAAGLAASERASDRDVAALIPK
>Mature_207_residues
MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAKANPQCRVPPLGDGLAIFMGP
DAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDAGRLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVG
LRMPITRLEGKRKMSQNRNAADRAGVAAGLAASERASDRDVAALIPK

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=107, Percent_Identity=36.4485981308411, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 22515; Mature: 22515

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCEEEEEEEC
ANPQCRVPPLGDGLAIFMGPDAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDAG
CCCCCCCCCCCCCEEEEECCCCEECCCEEECCCCCCCEECCCCEEEEEECCCHHHHHHHH
RLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVGLRMPITRLEGKRKMSQNRNA
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
ADRAGVAAGLAASERASDRDVAALIPK
HHHHHHHHCCHHHCCCCCCCEEEECCC
>Mature Secondary Structure
MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCEEEEEEEC
ANPQCRVPPLGDGLAIFMGPDAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDAG
CCCCCCCCCCCCCEEEEECCCCEECCCEEECCCCCCCEECCCCEEEEEECCCHHHHHHHH
RLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVGLRMPITRLEGKRKMSQNRNA
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
ADRAGVAAGLAASERASDRDVAALIPK
HHHHHHHHCCHHHCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]