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The map label for this gene is istB [H]

Identifier: 13475085

GI number: 13475085

Start: 4928603

End: 4929091

Strand: Reverse

Name: istB [H]

Synonym: mll6090

Alternate gene names: 13475085

Gene position: 4929091-4928603 (Counterclockwise)

Preceding gene: 13475086

Following gene: 13475084

Centisome position: 70.05

GC content: 59.71

Gene sequence:

>489_bases
ATGGCAGAACGGGAGGTCAGGTCCACGGCCTATCAGCTCAACGCTGCCCGCTTCCCGCTCTACCGTGACCTGGCCGGCTT
CGACTTCGCCAGCAGCGAGATCAACGAAGCGCTCGTGCGCCAGCTCCATCGCTGTGAGTTCATGGACCAGGCTAACAACG
TCGTGCTTGTCGGAGGTCCAGGCACCGGAAAGACCCACATCACTACAGCTCTCGGCGTGCGGGCGGTCGAGCATCAGTGC
AAGCGTGTCCGCTTCTTCTCCACTGTCGAATTCGTCAACGTGCTCGAACAGGAAGGCCCAAGAGCAGGTCAGATCGCCAA
CCGGCTCGCCCATTCCGATCTCGTCATCCTCAATGAACTCGGATATCTGCCCTTCAGCGCGTCAGGTGGGGCATTGCTGT
TCCATCTGCTGAGCACGCTCTACGGGCGCGCACCAGCGTCGTCATCACCACTAAAATTAATCTCAGCTTCAGCGAGTGGG
CTACCGTGA

Upstream 100 bases:

>100_bases
AGATGCACGGCACGGCGCAGGCCGTCGCCGAGCTCACCGAACAGGCCGCTCCCGCCTTCGAGGCCGCCATCCCGACCCGT
CCCAACTGCCGAAGGCCGAG

Downstream 100 bases:

>100_bases
CAACGGCGCTGCTCGATCGGCTGACCCATCACTGCCACATCCTGGAGACCGGAAACGACAGGTTCCGCTTCAAAAACAGT
TCCGCCCAGGGCCACAGCCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAEREVRSTAYQLNAARFPLYRDLAGFDFASSEINEALVRQLHRCEFMDQANNVVLVGGPGTGKTHITTALGVRAVEHQC
KRVRFFSTVEFVNVLEQEGPRAGQIANRLAHSDLVILNELGYLPFSASGGALLFHLLSTLYGRAPASSSPLKLISASASG
LP

Sequences:

>Translated_162_residues
MAEREVRSTAYQLNAARFPLYRDLAGFDFASSEINEALVRQLHRCEFMDQANNVVLVGGPGTGKTHITTALGVRAVEHQC
KRVRFFSTVEFVNVLEQEGPRAGQIANRLAHSDLVILNELGYLPFSASGGALLFHLLSTLYGRAPASSSPLKLISASASG
LP
>Mature_161_residues
AEREVRSTAYQLNAARFPLYRDLAGFDFASSEINEALVRQLHRCEFMDQANNVVLVGGPGTGKTHITTALGVRAVEHQCK
RVRFFSTVEFVNVLEQEGPRAGQIANRLAHSDLVILNELGYLPFSASGGALLFHLLSTLYGRAPASSSPLKLISASASGL
P

Specific function: One of two proteins expressed only when there is a tandem repeat of the IS21 insertion sequence, it is necessary for the transposition of plasmids with that tandem repeat [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 17558; Mature: 17427

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEREVRSTAYQLNAARFPLYRDLAGFDFASSEINEALVRQLHRCEFMDQANNVVLVGGP
CCCHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
GTGKTHITTALGVRAVEHQCKRVRFFSTVEFVNVLEQEGPRAGQIANRLAHSDLVILNEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHC
GYLPFSASGGALLFHLLSTLYGRAPASSSPLKLISASASGLP
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
AEREVRSTAYQLNAARFPLYRDLAGFDFASSEINEALVRQLHRCEFMDQANNVVLVGGP
CCHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
GTGKTHITTALGVRAVEHQCKRVRFFSTVEFVNVLEQEGPRAGQIANRLAHSDLVILNEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHC
GYLPFSASGGALLFHLLSTLYGRAPASSSPLKLISASASGLP
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2540414 [H]