BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is gabD [H]

Identifier: 13474836

GI number: 13474836

Start: 4685216

End: 4686709

Strand: Reverse

Name: gabD [H]

Synonym: mll5809

Alternate gene names: 13474836

Gene position: 4686709-4685216 (Counterclockwise)

Preceding gene: 13474837

Following gene: 13474832

Centisome position: 66.61

GC content: 56.56

Gene sequence:

>1494_bases
ATGAAGGGGGACGACGGTTTGACCGTGACACAGTCGCTGACGAGACGTCTCAAAAATCCCGAGCTATTTGACGATCTGGC
CGGTGTGCCTGGTCGGAAGGCGGAGCAATCCACGAGGCGTTTTTCGGTGTTCAATCCCTCAACGGGCGAGCTGTTGGCTG
AGCTTCCAGATATGGATGTCCGGGACGTTTCCAAGGCAATCGATAAGGCTGAAGCTGCGCAGGAACATTGGGCGGCGCTC
ACCGCGCGCGAGCGCTCCGACATCTTATGGGAATGGCACCAACTGATCCTCGACCACAGCGAGGATCTTGCAGCCATTTT
GACGGCTGAAATGGGTAAGCCGCTTGCAGAGGCGAAGTCTGAAATCGCCCATGCCGCAGCCTACCTCCAATGGTATGCCG
AGGAGGCCAATCGCATCTATGGCGAGACGATTTCGCCGCCTTCTAACGACAGGCGTATGCTGGTAATCAAACAGCCGATC
GGTGTTGTCGGCGCCATTACTCCTTGGAATTTTCCCGCCTCGATGGTGGCTCGCAAGATTTCGCCTGCGCTTGCCGCCGG
CTGCGCGATTGTTCTGAAACCCGCGGAGCAAACACCGCTTGTCGCGGGTGCTATGTTCACGCTTGCCCGGATGGCAGGTT
TTCCCGATGGCGTTCTAAACTTGATCTACGCATCGGAAGGCGATGCGGTTGGGCGTGAACTTTGCTCGAACCCGAAGGTC
CGCAAGATCAGCTTCACTGGGTCGACCGAGGTCGGGCGGCTACTCATGAGGGAGTGTTCGGATCAGATCAAAAGAACCAG
CTTCGAACTTGGTGGTAACGCTCCTTTCATTGTTTTTGATGATGCAGACGTCGACGCTGCCGTCGATGGTGCGCTACAGG
CAAAGTTTCGGAATGCAGGCCAGACCTGCGTTTCAGCCAATCGGCTTTACGTACAGTCCAGCGTGTATAATGAATTCTGC
GACAAATTCACCAAGCGCGTCAGTGCATTGCGCGTCGGTGACGGTTTCGAGCCAGAAGTTGCGATCGGTCCCCTGATCGA
TAAGTGCGCGCTTGCAAAGATTGAAGATCATATTCGCGATGCTGTGCGGCAGGGTGGGAAGATCCGTTGCGGTGGCAACC
GTATCGGCGAATCGGGAACCTTCTTCGAGCCCACGGTGATCACCGACGTCGAAAGGACAATGCGGGTCGCTCAGGAAGAA
ACCTTCGGACCGCTGGCTCCCATAATCCGCTTCAACGATCCCGACCAGGTGGTGCGCGAGGCGAATGACACGATTTACGG
TCTTGCAGCCTACTTCTACGCTTCCAATCTAAAGCGCGTGTGGCGCGTGGCTGAAGCCCTCGAATACGGAATGGTCGGCA
TCAATACGGGACGCATGTCATCCGAGGCCGCACCCTTTGGCGGAATGAAGCAATCAGGGATCGGTCGTGAGGGGTCGCGC
CACGGCCTCGAGGATTATCTCGAAATGAAGTACCTGTGCATGGGTGGGCTATAA

Upstream 100 bases:

>100_bases
GGGAAGCTGCGCTTGCAATGACGGAGGGCCGGAACGATTTCGTCCGATCATCTGGCACAAGTTGTGCTTATTAGTACGTT
GCGAAGCTAGTAACTTAACC

Downstream 100 bases:

>100_bases
TCCCACAGCATCCGCGTCCCATTGACTTCGCCCTGATAATCCGCCGCGGCCATCGATGGAATGGTGGCCTTCGATCAAGG
CCCAGCGTAAAACCTTGATG

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MKGDDGLTVTQSLTRRLKNPELFDDLAGVPGRKAEQSTRRFSVFNPSTGELLAELPDMDVRDVSKAIDKAEAAQEHWAAL
TARERSDILWEWHQLILDHSEDLAAILTAEMGKPLAEAKSEIAHAAAYLQWYAEEANRIYGETISPPSNDRRMLVIKQPI
GVVGAITPWNFPASMVARKISPALAAGCAIVLKPAEQTPLVAGAMFTLARMAGFPDGVLNLIYASEGDAVGRELCSNPKV
RKISFTGSTEVGRLLMRECSDQIKRTSFELGGNAPFIVFDDADVDAAVDGALQAKFRNAGQTCVSANRLYVQSSVYNEFC
DKFTKRVSALRVGDGFEPEVAIGPLIDKCALAKIEDHIRDAVRQGGKIRCGGNRIGESGTFFEPTVITDVERTMRVAQEE
TFGPLAPIIRFNDPDQVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGMKQSGIGREGSR
HGLEDYLEMKYLCMGGL

Sequences:

>Translated_497_residues
MKGDDGLTVTQSLTRRLKNPELFDDLAGVPGRKAEQSTRRFSVFNPSTGELLAELPDMDVRDVSKAIDKAEAAQEHWAAL
TARERSDILWEWHQLILDHSEDLAAILTAEMGKPLAEAKSEIAHAAAYLQWYAEEANRIYGETISPPSNDRRMLVIKQPI
GVVGAITPWNFPASMVARKISPALAAGCAIVLKPAEQTPLVAGAMFTLARMAGFPDGVLNLIYASEGDAVGRELCSNPKV
RKISFTGSTEVGRLLMRECSDQIKRTSFELGGNAPFIVFDDADVDAAVDGALQAKFRNAGQTCVSANRLYVQSSVYNEFC
DKFTKRVSALRVGDGFEPEVAIGPLIDKCALAKIEDHIRDAVRQGGKIRCGGNRIGESGTFFEPTVITDVERTMRVAQEE
TFGPLAPIIRFNDPDQVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGMKQSGIGREGSR
HGLEDYLEMKYLCMGGL
>Mature_497_residues
MKGDDGLTVTQSLTRRLKNPELFDDLAGVPGRKAEQSTRRFSVFNPSTGELLAELPDMDVRDVSKAIDKAEAAQEHWAAL
TARERSDILWEWHQLILDHSEDLAAILTAEMGKPLAEAKSEIAHAAAYLQWYAEEANRIYGETISPPSNDRRMLVIKQPI
GVVGAITPWNFPASMVARKISPALAAGCAIVLKPAEQTPLVAGAMFTLARMAGFPDGVLNLIYASEGDAVGRELCSNPKV
RKISFTGSTEVGRLLMRECSDQIKRTSFELGGNAPFIVFDDADVDAAVDGALQAKFRNAGQTCVSANRLYVQSSVYNEFC
DKFTKRVSALRVGDGFEPEVAIGPLIDKCALAKIEDHIRDAVRQGGKIRCGGNRIGESGTFFEPTVITDVERTMRVAQEE
TFGPLAPIIRFNDPDQVVREANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGMKQSGIGREGSR
HGLEDYLEMKYLCMGGL

Specific function: Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=460, Percent_Identity=49.3478260869565, Blast_Score=455, Evalue=1e-128,
Organism=Homo sapiens, GI25777721, Length=473, Percent_Identity=47.7801268498943, Blast_Score=444, Evalue=1e-125,
Organism=Homo sapiens, GI153266822, Length=465, Percent_Identity=40.4301075268817, Blast_Score=336, Evalue=4e-92,
Organism=Homo sapiens, GI25777724, Length=464, Percent_Identity=39.4396551724138, Blast_Score=326, Evalue=3e-89,
Organism=Homo sapiens, GI21361176, Length=482, Percent_Identity=37.551867219917, Blast_Score=317, Evalue=2e-86,
Organism=Homo sapiens, GI25777730, Length=463, Percent_Identity=37.3650107991361, Blast_Score=315, Evalue=5e-86,
Organism=Homo sapiens, GI25777732, Length=487, Percent_Identity=36.9609856262834, Blast_Score=309, Evalue=5e-84,
Organism=Homo sapiens, GI21614513, Length=458, Percent_Identity=37.5545851528384, Blast_Score=305, Evalue=9e-83,
Organism=Homo sapiens, GI25777728, Length=417, Percent_Identity=39.8081534772182, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI238814322, Length=467, Percent_Identity=36.6167023554604, Blast_Score=298, Evalue=1e-80,
Organism=Homo sapiens, GI12007648, Length=457, Percent_Identity=33.6980306345733, Blast_Score=288, Evalue=1e-77,
Organism=Homo sapiens, GI115387104, Length=457, Percent_Identity=33.9168490153173, Blast_Score=282, Evalue=4e-76,
Organism=Homo sapiens, GI25777726, Length=464, Percent_Identity=35.7758620689655, Blast_Score=279, Evalue=3e-75,
Organism=Homo sapiens, GI25952152, Length=450, Percent_Identity=30.6666666666667, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI310128103, Length=489, Percent_Identity=27.6073619631902, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI188035924, Length=489, Percent_Identity=27.6073619631902, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI310128093, Length=488, Percent_Identity=27.4590163934426, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI301500698, Length=280, Percent_Identity=36.4285714285714, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI11095441, Length=427, Percent_Identity=26.9320843091335, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI310128091, Length=488, Percent_Identity=26.844262295082, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI310128089, Length=325, Percent_Identity=28.9230769230769, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=31.25, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI223972651, Length=450, Percent_Identity=28.6666666666667, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI206597441, Length=438, Percent_Identity=26.2557077625571, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI206597439, Length=438, Percent_Identity=26.2557077625571, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI22907049, Length=438, Percent_Identity=26.2557077625571, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI73466520, Length=331, Percent_Identity=28.0966767371601, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI4557303, Length=331, Percent_Identity=28.0966767371601, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI310128095, Length=263, Percent_Identity=29.277566539924, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI73695881, Length=337, Percent_Identity=27.893175074184, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI73695879, Length=337, Percent_Identity=27.893175074184, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI310128087, Length=489, Percent_Identity=24.1308793456033, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI4502043, Length=335, Percent_Identity=26.865671641791, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI238814371, Length=335, Percent_Identity=26.865671641791, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI71773324, Length=335, Percent_Identity=26.865671641791, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI238859541, Length=468, Percent_Identity=27.1367521367521, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI25777736, Length=468, Percent_Identity=27.1367521367521, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI25777734, Length=468, Percent_Identity=27.1367521367521, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI223972653, Length=451, Percent_Identity=25.4988913525499, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI310128101, Length=266, Percent_Identity=25.5639097744361, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI310128099, Length=252, Percent_Identity=25.3968253968254, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI1789015, Length=481, Percent_Identity=56.7567567567568, Blast_Score=568, Evalue=1e-163,
Organism=Escherichia coli, GI1787684, Length=453, Percent_Identity=36.4238410596026, Blast_Score=313, Evalue=2e-86,
Organism=Escherichia coli, GI87081896, Length=475, Percent_Identity=35.5789473684211, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI1786504, Length=468, Percent_Identity=35.8974358974359, Blast_Score=277, Evalue=9e-76,
Organism=Escherichia coli, GI1787715, Length=452, Percent_Identity=35.1769911504425, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1787558, Length=469, Percent_Identity=34.3283582089552, Blast_Score=269, Evalue=4e-73,
Organism=Escherichia coli, GI87082295, Length=468, Percent_Identity=33.1196581196581, Blast_Score=245, Evalue=6e-66,
Organism=Escherichia coli, GI87081926, Length=448, Percent_Identity=31.25, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1788042, Length=451, Percent_Identity=32.1507760532151, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI1787250, Length=450, Percent_Identity=29.3333333333333, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1787653, Length=366, Percent_Identity=24.5901639344262, Blast_Score=85, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17534119, Length=457, Percent_Identity=43.5448577680525, Blast_Score=388, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI133930964, Length=507, Percent_Identity=37.2781065088757, Blast_Score=327, Evalue=1e-89,
Organism=Caenorhabditis elegans, GI25144435, Length=464, Percent_Identity=37.2844827586207, Blast_Score=310, Evalue=1e-84,
Organism=Caenorhabditis elegans, GI17562198, Length=464, Percent_Identity=36.8534482758621, Blast_Score=304, Evalue=8e-83,
Organism=Caenorhabditis elegans, GI25143876, Length=469, Percent_Identity=35.8208955223881, Blast_Score=294, Evalue=6e-80,
Organism=Caenorhabditis elegans, GI25143874, Length=460, Percent_Identity=35.8695652173913, Blast_Score=293, Evalue=1e-79,
Organism=Caenorhabditis elegans, GI32564736, Length=394, Percent_Identity=39.3401015228426, Blast_Score=288, Evalue=5e-78,
Organism=Caenorhabditis elegans, GI71995606, Length=473, Percent_Identity=34.6723044397463, Blast_Score=268, Evalue=6e-72,
Organism=Caenorhabditis elegans, GI17551164, Length=492, Percent_Identity=31.9105691056911, Blast_Score=258, Evalue=4e-69,
Organism=Caenorhabditis elegans, GI71995613, Length=415, Percent_Identity=33.7349397590361, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI115534176, Length=489, Percent_Identity=28.4253578732106, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI71986308, Length=432, Percent_Identity=26.8518518518519, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI32566756, Length=343, Percent_Identity=27.9883381924198, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI25146394, Length=343, Percent_Identity=27.9883381924198, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI25146391, Length=343, Percent_Identity=27.9883381924198, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17534447, Length=445, Percent_Identity=26.0674157303371, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI115532534, Length=341, Percent_Identity=27.2727272727273, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17564084, Length=421, Percent_Identity=25.6532066508314, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI32564151, Length=399, Percent_Identity=25.8145363408521, Blast_Score=119, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI71990744, Length=285, Percent_Identity=24.9122807017544, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=493, Percent_Identity=45.841784989858, Blast_Score=464, Evalue=1e-131,
Organism=Saccharomyces cerevisiae, GI6320917, Length=458, Percent_Identity=39.3013100436681, Blast_Score=322, Evalue=1e-88,
Organism=Saccharomyces cerevisiae, GI6324950, Length=471, Percent_Identity=35.031847133758, Blast_Score=298, Evalue=1e-81,
Organism=Saccharomyces cerevisiae, GI6323822, Length=467, Percent_Identity=35.117773019272, Blast_Score=282, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6323821, Length=467, Percent_Identity=35.117773019272, Blast_Score=281, Evalue=2e-76,
Organism=Saccharomyces cerevisiae, GI6325196, Length=460, Percent_Identity=35.2173913043478, Blast_Score=274, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6321828, Length=477, Percent_Identity=28.0922431865828, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6323757, Length=350, Percent_Identity=29.1428571428571, Blast_Score=106, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6321826, Length=467, Percent_Identity=26.5524625267666, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281362580, Length=491, Percent_Identity=50.7128309572301, Blast_Score=515, Evalue=1e-146,
Organism=Drosophila melanogaster, GI62472918, Length=491, Percent_Identity=50.7128309572301, Blast_Score=515, Evalue=1e-146,
Organism=Drosophila melanogaster, GI62472926, Length=491, Percent_Identity=50.7128309572301, Blast_Score=515, Evalue=1e-146,
Organism=Drosophila melanogaster, GI62472936, Length=491, Percent_Identity=50.7128309572301, Blast_Score=515, Evalue=1e-146,
Organism=Drosophila melanogaster, GI21356737, Length=491, Percent_Identity=50.7128309572301, Blast_Score=515, Evalue=1e-146,
Organism=Drosophila melanogaster, GI24650465, Length=485, Percent_Identity=38.5567010309278, Blast_Score=352, Evalue=3e-97,
Organism=Drosophila melanogaster, GI20129399, Length=463, Percent_Identity=36.9330453563715, Blast_Score=296, Evalue=3e-80,
Organism=Drosophila melanogaster, GI24585660, Length=464, Percent_Identity=35.1293103448276, Blast_Score=289, Evalue=3e-78,
Organism=Drosophila melanogaster, GI24666674, Length=480, Percent_Identity=28.5416666666667, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24638876, Length=433, Percent_Identity=25.635103926097, Blast_Score=168, Evalue=7e-42,
Organism=Drosophila melanogaster, GI24638878, Length=433, Percent_Identity=25.635103926097, Blast_Score=168, Evalue=8e-42,
Organism=Drosophila melanogaster, GI45552499, Length=415, Percent_Identity=26.0240963855422, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281360303, Length=415, Percent_Identity=26.0240963855422, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI281360299, Length=415, Percent_Identity=25.5421686746988, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281360297, Length=415, Percent_Identity=25.5421686746988, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281360295, Length=415, Percent_Identity=25.5421686746988, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24586250, Length=415, Percent_Identity=25.5421686746988, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281360301, Length=415, Percent_Identity=25.5421686746988, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24668425, Length=404, Percent_Identity=25.4950495049505, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24668417, Length=404, Percent_Identity=25.4950495049505, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24668413, Length=404, Percent_Identity=25.4950495049505, Blast_Score=125, Evalue=9e-29,
Organism=Drosophila melanogaster, GI28571806, Length=446, Percent_Identity=25.3363228699552, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI28571798, Length=446, Percent_Identity=25.3363228699552, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI28571796, Length=446, Percent_Identity=25.3363228699552, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI28571794, Length=446, Percent_Identity=25.3363228699552, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI28571802, Length=446, Percent_Identity=25.3363228699552, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI28571800, Length=446, Percent_Identity=25.3363228699552, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI28574525, Length=467, Percent_Identity=24.1970021413276, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281360293, Length=233, Percent_Identity=27.0386266094421, Blast_Score=79, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 54325; Mature: 54325

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGDDGLTVTQSLTRRLKNPELFDDLAGVPGRKAEQSTRRFSVFNPSTGELLAELPDMDV
CCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHCEEEECCCCHHHHHHHCCCCCH
RDVSKAIDKAEAAQEHWAALTARERSDILWEWHQLILDHSEDLAAILTAEMGKPLAEAKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHH
EIAHAAAYLQWYAEEANRIYGETISPPSNDRRMLVIKQPIGVVGAITPWNFPASMVARKI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHH
SPALAAGCAIVLKPAEQTPLVAGAMFTLARMAGFPDGVLNLIYASEGDAVGRELCSNPKV
CHHHHHCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHEEEECCCCCHHHHHHHCCCCE
RKISFTGSTEVGRLLMRECSDQIKRTSFELGGNAPFIVFDDADVDAAVDGALQAKFRNAG
EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
QTCVSANRLYVQSSVYNEFCDKFTKRVSALRVGDGFEPEVAIGPLIDKCALAKIEDHIRD
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
AVRQGGKIRCGGNRIGESGTFFEPTVITDVERTMRVAQEETFGPLAPIIRFNDPDQVVRE
HHHCCCEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
ANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGMKQSGIGREGSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
HGLEDYLEMKYLCMGGL
CCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGDDGLTVTQSLTRRLKNPELFDDLAGVPGRKAEQSTRRFSVFNPSTGELLAELPDMDV
CCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHCEEEECCCCHHHHHHHCCCCCH
RDVSKAIDKAEAAQEHWAALTARERSDILWEWHQLILDHSEDLAAILTAEMGKPLAEAKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHH
EIAHAAAYLQWYAEEANRIYGETISPPSNDRRMLVIKQPIGVVGAITPWNFPASMVARKI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHH
SPALAAGCAIVLKPAEQTPLVAGAMFTLARMAGFPDGVLNLIYASEGDAVGRELCSNPKV
CHHHHHCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHEEEECCCCCHHHHHHHCCCCE
RKISFTGSTEVGRLLMRECSDQIKRTSFELGGNAPFIVFDDADVDAAVDGALQAKFRNAG
EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCC
QTCVSANRLYVQSSVYNEFCDKFTKRVSALRVGDGFEPEVAIGPLIDKCALAKIEDHIRD
HHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
AVRQGGKIRCGGNRIGESGTFFEPTVITDVERTMRVAQEETFGPLAPIIRFNDPDQVVRE
HHHCCCEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
ANDTIYGLAAYFYASNLKRVWRVAEALEYGMVGINTGRMSSEAAPFGGMKQSGIGREGSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
HGLEDYLEMKYLCMGGL
CCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]