| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ymgE [C]
Identifier: 13474783
GI number: 13474783
Start: 4630508
End: 4630765
Strand: Reverse
Name: ymgE [C]
Synonym: msl5749
Alternate gene names: 13474783
Gene position: 4630765-4630508 (Counterclockwise)
Preceding gene: 13474787
Following gene: 13474778
Centisome position: 65.81
GC content: 53.88
Gene sequence:
>258_bases ATGTCAATCATCAGTTGGATCATCCTTGGGGTTATCGCTGGCTTCCTGGGCAGCAAGATAGTCAACAAGACCGGTCAAGG TATTCTCCTCGACATCGTGCTCGGTGTCGTCGGTGCCATTGTCGGCGGACTCATTTTCAGCGCGTTTGGCGCTTCGGGCG TTACCGGCCTCAATATATACAGCTTGGTGGTTGCGGTCATTGGAGCCGTTATTGTGCTGTGGGCGTATCACCAGATGACT GCCAACCGAGCACCTTAG
Upstream 100 bases:
>100_bases AGCAAGCCCTTCTCAAACATGGCGCATCCCGGCGCATATTCAAGCTGGCTTGTGCTTTTGATGATCCTATGAAAATGATG AGCCTGCGGAGGATGGAAGA
Downstream 100 bases:
>100_bases ATCAGAATCCTTCAAGCTGAGACGCCGGTTTTCCGAGCAACACGGATTCGGTCGACGCCTAACCGGCGTTGGGCGGGTGC CGTCTATTTCCAACTGCGCG
Product: transglycosylase associated protein
Products: NA
Alternate protein names: Transglycosylase-Associated Protein
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSIISWIILGVIAGFLGSKIVNKTGQGILLDIVLGVVGAIVGGLIFSAFGASGVTGLNIYSLVVAVIGAVIVLWAYHQMT ANRAP
Sequences:
>Translated_85_residues MSIISWIILGVIAGFLGSKIVNKTGQGILLDIVLGVVGAIVGGLIFSAFGASGVTGLNIYSLVVAVIGAVIVLWAYHQMT ANRAP >Mature_84_residues SIISWIILGVIAGFLGSKIVNKTGQGILLDIVLGVVGAIVGGLIFSAFGASGVTGLNIYSLVVAVIGAVIVLWAYHQMTA NRAP
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8668; Mature: 8536
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIISWIILGVIAGFLGSKIVNKTGQGILLDIVLGVVGAIVGGLIFSAFGASGVTGLNIY CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SLVVAVIGAVIVLWAYHQMTANRAP HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SIISWIILGVIAGFLGSKIVNKTGQGILLDIVLGVVGAIVGGLIFSAFGASGVTGLNIY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SLVVAVIGAVIVLWAYHQMTANRAP HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA