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The map label for this gene is ulaR [H]

Identifier: 13474750

GI number: 13474750

Start: 4594450

End: 4595253

Strand: Reverse

Name: ulaR [H]

Synonym: mll5707

Alternate gene names: 13474750

Gene position: 4595253-4594450 (Counterclockwise)

Preceding gene: 13474754

Following gene: 13474749

Centisome position: 65.31

GC content: 61.69

Gene sequence:

>804_bases
ATGCACGAAAAAGAGCGTCATAGGATCATTCTGTCCGCCGTCCAGGAAAAGCCTGTGGTGACGGTGCAGGAGATGGTCGA
CCTGACGGAGTCGTCCGAGGCGACGATCCGGCGCGATATCGCGGCTCTGCACGTGCAAAAGCGCCTGCGCCGGGTGCGCG
GTGGCGCCGAGGCGATCTCGCCGCCGCAATTCATCGGCCTGGCCGGCCGGCCCTTTTCCGTCAACGAAACGATCAACGCT
TCGCAGAAGCGGGCGATCGCCCGGGAAGCGGTCGAATTGTGCGGGGATGGCGAGCCGATCATCATCAATGGTGGCACCAC
CACTTTCCAGATGGTGCATTTCCTGACTGGGCGGCGCATGCCGATCTTCACCAATTCGTTCCCGATCGCCGAGCATCTGC
TCAAGCACTCGAAGAACACGGTGATGCTGTCGGGCGGCACCATCTATCGCGAGCAGAACATCATCCTGTCGCCCTTCGAC
AATGACGTGACGCGCAATTTCTATGCGCGCCGCATGTTCATGGGCGCGCAAGGGTTGGGACCGCTCGGCCTGATGGAAGG
CGACCCGCTGCTGATCCAGGCGGAGCAGAAGCTGATCGACCAGGCCGACGAGCTGGTGGTGCTGGTCGATTCCTCGAAAT
TCCGCAAGCGCTCCAGCCTGATCCTGTGCGGGTTGTCGCGCATCGCCACCGTCATCACCGATGACGGGATCGAGGATCGT
GAAGCCAAGATGTTGGAGACCGCGGGCGTGACGCTGATCGTCGCCCGCAAGACGGCAAAGGAAGAATCTTCACTGCAGGC
CTGA

Upstream 100 bases:

>100_bases
ATCAAGATCGATCATATTGCACTGCACAATGAAATTATATGATCGGAAATGATTGACACTGCTCGTTTTGAGTGCCTAGA
TGGCCAGGCAGGGAGGAACC

Downstream 100 bases:

>100_bases
GACACTCACGCCCGCAGCGGCGATGGAATGCAACGCTCAAGGGAGGATATGCGATGAGCTTTTTGAAGAAATTGATGGTG
ACGGCCGCATTCTCGGCCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHEKERHRIILSAVQEKPVVTVQEMVDLTESSEATIRRDIAALHVQKRLRRVRGGAEAISPPQFIGLAGRPFSVNETINA
SQKRAIAREAVELCGDGEPIIINGGTTTFQMVHFLTGRRMPIFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFD
NDVTRNFYARRMFMGAQGLGPLGLMEGDPLLIQAEQKLIDQADELVVLVDSSKFRKRSSLILCGLSRIATVITDDGIEDR
EAKMLETAGVTLIVARKTAKEESSLQA

Sequences:

>Translated_267_residues
MHEKERHRIILSAVQEKPVVTVQEMVDLTESSEATIRRDIAALHVQKRLRRVRGGAEAISPPQFIGLAGRPFSVNETINA
SQKRAIAREAVELCGDGEPIIINGGTTTFQMVHFLTGRRMPIFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFD
NDVTRNFYARRMFMGAQGLGPLGLMEGDPLLIQAEQKLIDQADELVVLVDSSKFRKRSSLILCGLSRIATVITDDGIEDR
EAKMLETAGVTLIVARKTAKEESSLQA
>Mature_267_residues
MHEKERHRIILSAVQEKPVVTVQEMVDLTESSEATIRRDIAALHVQKRLRRVRGGAEAISPPQFIGLAGRPFSVNETINA
SQKRAIAREAVELCGDGEPIIINGGTTTFQMVHFLTGRRMPIFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFD
NDVTRNFYARRMFMGAQGLGPLGLMEGDPLLIQAEQKLIDQADELVVLVDSSKFRKRSSLILCGLSRIATVITDDGIEDR
EAKMLETAGVTLIVARKTAKEESSLQA

Specific function: Represses ulaG and the ulaABCDEF operon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790635, Length=256, Percent_Identity=33.984375, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI226510968, Length=255, Percent_Identity=27.843137254902, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789059, Length=260, Percent_Identity=26.1538461538462, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1789519, Length=255, Percent_Identity=25.8823529411765, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789829, Length=236, Percent_Identity=25.8474576271186, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787540, Length=252, Percent_Identity=28.1746031746032, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789170, Length=232, Percent_Identity=25, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082344, Length=232, Percent_Identity=25, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788069, Length=238, Percent_Identity=26.890756302521, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790753, Length=258, Percent_Identity=22.093023255814, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 29578; Mature: 29578

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEKERHRIILSAVQEKPVVTVQEMVDLTESSEATIRRDIAALHVQKRLRRVRGGAEAIS
CCCHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PPQFIGLAGRPFSVNETINASQKRAIAREAVELCGDGEPIIINGGTTTFQMVHFLTGRRM
CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCC
PIFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFDNDVTRNFYARRMFMGAQGLG
CEEECCCHHHHHHHHCCCCEEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHCCCCCC
PLGLMEGDPLLIQAEQKLIDQADELVVLVDSSKFRKRSSLILCGLSRIATVITDDGIEDR
CCCCCCCCCEEEEHHHHHHCCCCCEEEEECCCCHHHHCCEEEECHHHHHHHHCCCCCCHH
EAKMLETAGVTLIVARKTAKEESSLQA
HHHHHHHCCEEEEEEECCCCCHHCCCC
>Mature Secondary Structure
MHEKERHRIILSAVQEKPVVTVQEMVDLTESSEATIRRDIAALHVQKRLRRVRGGAEAIS
CCCHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PPQFIGLAGRPFSVNETINASQKRAIAREAVELCGDGEPIIINGGTTTFQMVHFLTGRRM
CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCC
PIFTNSFPIAEHLLKHSKNTVMLSGGTIYREQNIILSPFDNDVTRNFYARRMFMGAQGLG
CEEECCCHHHHHHHHCCCCEEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHCCCCCC
PLGLMEGDPLLIQAEQKLIDQADELVVLVDSSKFRKRSSLILCGLSRIATVITDDGIEDR
CCCCCCCCCEEEEHHHHHHCCCCCEEEEECCCCHHHHCCEEEECHHHHHHHHCCCCCCHH
EAKMLETAGVTLIVARKTAKEESSLQA
HHHHHHHCCEEEEEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA