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The map label for this gene is lsrB [H]

Identifier: 13474749

GI number: 13474749

Start: 4593401

End: 4594396

Strand: Reverse

Name: lsrB [H]

Synonym: mll5706

Alternate gene names: 13474749

Gene position: 4594396-4593401 (Counterclockwise)

Preceding gene: 13474750

Following gene: 13474748

Centisome position: 65.3

GC content: 62.35

Gene sequence:

>996_bases
ATGAGCTTTTTGAAGAAATTGATGGTGACGGCCGCATTCTCGGCCGCCATGTTCGTGAATGCCGCCTATGCCGAGAACGT
CAAGATCGCACTGGTGGTGAAGTCGCTCGGCAACGGCTTCTTCGACGCCGCCAACAAGGGCGCCGAAGAGGCGGCCAAGG
AACTCGGCGATGTCGACATCATCTACACCGGCCCGACCAAGGCGACCGCCGAAGCGCAGATCGAAGTGGTCAACTCGCTG
ATCGCGCAAAAGGTCAACGCCATCGCCATTTCGGCCAATGACGCCGACGCGCTGGTGCCGGTGCTGAAGAAGGCCATGGA
GCGCGGCATCACCGTCATCTCCTGGGATTCCGGTGTCGCCAAGGAAGGTCGCCAGCTGCATCTCAACCCGTCCGACACCG
GCCTGATCGGCGAGACCATCATCAAGCTTGCCGCCGACTATCTGCCGGAAGGCGGCGATGTCGCCATCCTGTCGGCCTCC
TCGACCGCGACCAACCAAAACGCCTGGATCGACGCGGCCAAGAAGGTGCTGCCGGAGAAGTTCCCCAAGATCAAGCTCGT
CGCCACCGTCTATGGCGATGACGATTCGGCCAAGAGCACCGACGAAGCCAAGGGCCTGCTGAAGTCCTATCCGAACCTCA
AGGCGATCATCGCGCCGACCACCGTCGGCGTCGTCGCCGCCGCCCAGGTCGTCACCGACGAGAAGCTGATCGGCAAGGTC
AATGTCACCGGTCTGGCGCTGCCGTCCGAGTTCAAGAAGTTCATCGACAACGGCGCCAGCCAGGCGGTCGCGCTGTGGAA
CCCGATCGACCTCGGCTACTCGGCCGTCTACCTCGCCCACGACCTGGCGGTGAAGAAGGAAGAGGCCAAGCCCGGTGCGA
CGCTGTCGATCGGCCGCGTCGGCAAGGTCACGCTCGACGACTCGAACTCGGCCGCGATGGCTCCGCCCTTCCAGTTCGAC
AAGACCAACATCGAGAAGTTCTCCAAGATCTATTGA

Upstream 100 bases:

>100_bases
TCGTCGCCCGCAAGACGGCAAAGGAAGAATCTTCACTGCAGGCCTGAGACACTCACGCCCGCAGCGGCGATGGAATGCAA
CGCTCAAGGGAGGATATGCG

Downstream 100 bases:

>100_bases
TCTGGAGACCTTTCAAGCTGTCGCGGCGGGGCTCACGTCCCGCCGCGACTTTAAACGGACCTTGTTTCAGGGCTTGATAC
GAACCATGGACACGACAGCC

Product: sugar ABC transporter, periplasmic sugar-binding protein

Products: NA

Alternate protein names: AI-2-binding protein lsrB [H]

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSFLKKLMVTAAFSAAMFVNAAYAENVKIALVVKSLGNGFFDAANKGAEEAAKELGDVDIIYTGPTKATAEAQIEVVNSL
IAQKVNAIAISANDADALVPVLKKAMERGITVISWDSGVAKEGRQLHLNPSDTGLIGETIIKLAADYLPEGGDVAILSAS
STATNQNAWIDAAKKVLPEKFPKIKLVATVYGDDDSAKSTDEAKGLLKSYPNLKAIIAPTTVGVVAAAQVVTDEKLIGKV
NVTGLALPSEFKKFIDNGASQAVALWNPIDLGYSAVYLAHDLAVKKEEAKPGATLSIGRVGKVTLDDSNSAAMAPPFQFD
KTNIEKFSKIY

Sequences:

>Translated_331_residues
MSFLKKLMVTAAFSAAMFVNAAYAENVKIALVVKSLGNGFFDAANKGAEEAAKELGDVDIIYTGPTKATAEAQIEVVNSL
IAQKVNAIAISANDADALVPVLKKAMERGITVISWDSGVAKEGRQLHLNPSDTGLIGETIIKLAADYLPEGGDVAILSAS
STATNQNAWIDAAKKVLPEKFPKIKLVATVYGDDDSAKSTDEAKGLLKSYPNLKAIIAPTTVGVVAAAQVVTDEKLIGKV
NVTGLALPSEFKKFIDNGASQAVALWNPIDLGYSAVYLAHDLAVKKEEAKPGATLSIGRVGKVTLDDSNSAAMAPPFQFD
KTNIEKFSKIY
>Mature_330_residues
SFLKKLMVTAAFSAAMFVNAAYAENVKIALVVKSLGNGFFDAANKGAEEAAKELGDVDIIYTGPTKATAEAQIEVVNSLI
AQKVNAIAISANDADALVPVLKKAMERGITVISWDSGVAKEGRQLHLNPSDTGLIGETIIKLAADYLPEGGDVAILSASS
TATNQNAWIDAAKKVLPEKFPKIKLVATVYGDDDSAKSTDEAKGLLKSYPNLKAIIAPTTVGVVAAAQVVTDEKLIGKVN
VTGLALPSEFKKFIDNGASQAVALWNPIDLGYSAVYLAHDLAVKKEEAKPGATLSIGRVGKVTLDDSNSAAMAPPFQFDK
TNIEKFSKIY

Specific function: Part of the ABC transporter complex lsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the lsrC and lsrD permeases [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787795, Length=338, Percent_Identity=34.6153846153846, Blast_Score=181, Evalue=9e-47,
Organism=Escherichia coli, GI1790526, Length=282, Percent_Identity=27.6595744680851, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34844; Mature: 34713

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLKKLMVTAAFSAAMFVNAAYAENVKIALVVKSLGNGFFDAANKGAEEAAKELGDVDI
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCHHHHCCCCHHHHHHHHCCEEE
IYTGPTKATAEAQIEVVNSLIAQKVNAIAISANDADALVPVLKKAMERGITVISWDSGVA
EEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCC
KEGRQLHLNPSDTGLIGETIIKLAADYLPEGGDVAILSASSTATNQNAWIDAAKKVLPEK
CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
FPKIKLVATVYGDDDSAKSTDEAKGLLKSYPNLKAIIAPTTVGVVAAAQVVTDEKLIGKV
CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEE
NVTGLALPSEFKKFIDNGASQAVALWNPIDLGYSAVYLAHDLAVKKEEAKPGATLSIGRV
EEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCC
GKVTLDDSNSAAMAPPFQFDKTNIEKFSKIY
EEEEECCCCCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
SFLKKLMVTAAFSAAMFVNAAYAENVKIALVVKSLGNGFFDAANKGAEEAAKELGDVDI
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCHHHHCCCCHHHHHHHHCCEEE
IYTGPTKATAEAQIEVVNSLIAQKVNAIAISANDADALVPVLKKAMERGITVISWDSGVA
EEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCC
KEGRQLHLNPSDTGLIGETIIKLAADYLPEGGDVAILSASSTATNQNAWIDAAKKVLPEK
CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
FPKIKLVATVYGDDDSAKSTDEAKGLLKSYPNLKAIIAPTTVGVVAAAQVVTDEKLIGKV
CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEE
NVTGLALPSEFKKFIDNGASQAVALWNPIDLGYSAVYLAHDLAVKKEEAKPGATLSIGRV
EEEEEECHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCC
GKVTLDDSNSAAMAPPFQFDKTNIEKFSKIY
EEEEECCCCCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA