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The map label for this gene is omp31 [H]

Identifier: 13474724

GI number: 13474724

Start: 4564618

End: 4565235

Strand: Reverse

Name: omp31 [H]

Synonym: mll5677

Alternate gene names: 13474724

Gene position: 4565235-4564618 (Counterclockwise)

Preceding gene: 13474726

Following gene: 13474723

Centisome position: 64.88

GC content: 65.21

Gene sequence:

>618_bases
GTGTCCTCTCGAGTAAAGATCGTCGTGACGGCGGCTGGCCTCGCCTTTTGCCTTCTCGGGCCGGCGATGGCCGCCGACCT
CTCACCCACCTACAACGACCCGCCCGCCTTCCAGTGGAGCGGCGCCTATGTCGGCGTCCATGGCGGCACGGCGTTCACCG
GAATGCCGAACCCGTTTGCAGGCCGCAATGGCTTCAGCGGCGGCGTCCAGGCCGGCTACAACCAGCAGATGGGTCCCACC
GTTCTCGGCGCCGAGATCGAAGGCTCCTATCTGGGCGGCGCCGAACACGACGTCCAAGGCGGCAAGATCAAGGAGAAATG
GCGCGGTGCCGCCAAGGCCAAGGCAGGATTGAGCTTCGACCAGACGCTGCTGTTTGGCACCGGCGGCGTCGCCCTTACCA
AGTTCGACAAGGGCGACAACGTCAGCAGCGCCGACGGATGGAAGGTCGGCTACCTCCTGGGCGCCGGCATCGAGCAGGGC
TTTGCCGGCGGGCTGTCCGCCAAGGTCGAGTACGACTATGTCCGCACCCTCGGCGTCGAGACGACATCGGCTCTTGGCAC
GTCGAAGACGACGATCGGCAGCCATGAACTGAAGGCCGGCATCAATTACCGGTTCTAG

Upstream 100 bases:

>100_bases
AAAGACACCAAACCGGAGCCCGGCCGCCCTAACGGCCAAGCTCCCCGAGAGTTAACCTGCGTGTCGATTGCTGGATGCGC
GTTTGTGTTGGAGTAATGCT

Downstream 100 bases:

>100_bases
AATGGGCGAACCCGGATTGCGCGACGCCGCTGGGCATCGCGCAATCCGGTGTCTCGATTTGCACCGCACAGGATTGCCAG
CTTTTCCGCAATGGCCCGCT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSSRVKIVVTAAGLAFCLLGPAMAADLSPTYNDPPAFQWSGAYVGVHGGTAFTGMPNPFAGRNGFSGGVQAGYNQQMGPT
VLGAEIEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLSFDQTLLFGTGGVALTKFDKGDNVSSADGWKVGYLLGAGIEQG
FAGGLSAKVEYDYVRTLGVETTSALGTSKTTIGSHELKAGINYRF

Sequences:

>Translated_205_residues
MSSRVKIVVTAAGLAFCLLGPAMAADLSPTYNDPPAFQWSGAYVGVHGGTAFTGMPNPFAGRNGFSGGVQAGYNQQMGPT
VLGAEIEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLSFDQTLLFGTGGVALTKFDKGDNVSSADGWKVGYLLGAGIEQG
FAGGLSAKVEYDYVRTLGVETTSALGTSKTTIGSHELKAGINYRF
>Mature_204_residues
SSRVKIVVTAAGLAFCLLGPAMAADLSPTYNDPPAFQWSGAYVGVHGGTAFTGMPNPFAGRNGFSGGVQAGYNQQMGPTV
LGAEIEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLSFDQTLLFGTGGVALTKFDKGDNVSSADGWKVGYLLGAGIEQGF
AGGLSAKVEYDYVRTLGVETTSALGTSKTTIGSHELKAGINYRF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 21112; Mature: 20981

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRVKIVVTAAGLAFCLLGPAMAADLSPTYNDPPAFQWSGAYVGVHGGTAFTGMPNPFA
CCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCCEEECCCCCCCC
GRNGFSGGVQAGYNQQMGPTVLGAEIEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLSFD
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHHHCCHHHHHCCCCCC
QTLLFGTGGVALTKFDKGDNVSSADGWKVGYLLGAGIEQGFAGGLSAKVEYDYVRTLGVE
CEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHEEECCC
TTSALGTSKTTIGSHELKAGINYRF
CHHHCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
SSRVKIVVTAAGLAFCLLGPAMAADLSPTYNDPPAFQWSGAYVGVHGGTAFTGMPNPFA
CCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCCEEECCCCCCCC
GRNGFSGGVQAGYNQQMGPTVLGAEIEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLSFD
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHHHCCHHHHHCCCCCC
QTLLFGTGGVALTKFDKGDNVSSADGWKVGYLLGAGIEQGFAGGLSAKVEYDYVRTLGVE
CEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHEEECCC
TTSALGTSKTTIGSHELKAGINYRF
CHHHCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]