| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474708
Identifier: 13474708
GI number: 13474708
Start: 4545527
End: 4546669
Strand: Reverse
Name: 13474708
Synonym: mll5655
Alternate gene names: NA
Gene position: 4546669-4545527 (Counterclockwise)
Preceding gene: 13474709
Following gene: 13474705
Centisome position: 64.62
GC content: 64.3
Gene sequence:
>1143_bases GTGCGTAGAAGTTCCCTCAAGGAACCAGGCCCCGCGAGCGCAATCCGAACGGAGAATTTCACCCGTGGCATGGGCGAGGT CCCAGCCGCGCTTGGGAAGGTTTGCCGCGGCGGCAGCCATGCCAAGGCACATGAGAGAGGATTGATCATGCTGATCTCGC AGATTCTCGATGACGCCGAGACCATCCGCGTCGTTGCCCGCAATGGCGGCAAGACCCGGATCATCAACGGCGCCCGCAGC GTCTATTCGCTGGCGATGGAGGCGGCCCGCACCGGCGTCGGCCTGGCCACCCTGATCGAGCGCAAGGGGCTCGGCGAGAC GGTCGATCTCGATGCCGCCTACAAGAAAGGGCGGCTGTTGTCGCCGATCAATCACCCCGATCCGGCGCATCTGCATCTCA CCGGCACCGGCCTGACGCATCTGGGCTCGGCTGCGACGCGCGATTCCATGCACAAGAAGCTCAGCAGCGCCGATGGCGAG GAGCAGCTCACCGATTCCATGAAGATGTTCCGCATGGGACTGGAGGGCGGCAAGCCCGCCAAGGGCCAGGTCGGCGTGCA GCCGGAATGGTTCTACAAGGGCAACGGCACGATGGCCGTGGCGCCGGGTGCCGCGCTTCTGTCACCGGCCTTCGCCAAGG ACGCCGGCGAGGAACCTGAAATCGCCGGCATCTATGTCATCGGCGATGACGGCGCCCCCTTCCGCGTCGGCTTCACGCTG TCGAACGAGTTTTCCGACCACGTGACCGAGCGCGTGAACTACCTCTTCCTCGCCCATTCCAAGCTGCGTAACGCCTCGTT CGGACCGGAGATCCTGATCGGCGACCTGCCTTCCGACATCCGCGGCACCTCGCGCATCGTGCGCGACGGCGAGACGCTGT GGGAAAAGCCGTTCCTGTCGGGCGAAGCCAACATGTCGCATACCATCGCCAATCTCGAACACCATCACTTCAAATATTCG GCGTTCCGCCAGCCGGGCGACGTGCACGTGCATATGTTCGGTACGGCGACACTGTCCTTCGCCGACGGCGTCAAGACCGA GGCCGGCGATGTGTTCGAGATCGAAGCCGGGGATTTCGGCCTGCCGCTGCGCAACCCGCTCGAGATCGAAAAGCCGGTGA AGGTGGCGGTGAAGGCGCTGTAG
Upstream 100 bases:
>100_bases AAAATACCGGGAGCGGGTCGACCACTCAAAGCTGATCCGCTCCAGCGAGGCAACAAGGAAGGCATACGGGTCACATCGCG GCGCTGCCGGCAACCAGCCG
Downstream 100 bases:
>100_bases CGCCAGCTTCCCCTTCTCCCCTGTGGGAGAAGGAAGAGGCGCTCTTCAACCTCAATAAATATCAAAATCGAAGTACTTGG CCTGGATCTTCTTGTAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MRRSSLKEPGPASAIRTENFTRGMGEVPAALGKVCRGGSHAKAHERGLIMLISQILDDAETIRVVARNGGKTRIINGARS VYSLAMEAARTGVGLATLIERKGLGETVDLDAAYKKGRLLSPINHPDPAHLHLTGTGLTHLGSAATRDSMHKKLSSADGE EQLTDSMKMFRMGLEGGKPAKGQVGVQPEWFYKGNGTMAVAPGAALLSPAFAKDAGEEPEIAGIYVIGDDGAPFRVGFTL SNEFSDHVTERVNYLFLAHSKLRNASFGPEILIGDLPSDIRGTSRIVRDGETLWEKPFLSGEANMSHTIANLEHHHFKYS AFRQPGDVHVHMFGTATLSFADGVKTEAGDVFEIEAGDFGLPLRNPLEIEKPVKVAVKAL
Sequences:
>Translated_380_residues MRRSSLKEPGPASAIRTENFTRGMGEVPAALGKVCRGGSHAKAHERGLIMLISQILDDAETIRVVARNGGKTRIINGARS VYSLAMEAARTGVGLATLIERKGLGETVDLDAAYKKGRLLSPINHPDPAHLHLTGTGLTHLGSAATRDSMHKKLSSADGE EQLTDSMKMFRMGLEGGKPAKGQVGVQPEWFYKGNGTMAVAPGAALLSPAFAKDAGEEPEIAGIYVIGDDGAPFRVGFTL SNEFSDHVTERVNYLFLAHSKLRNASFGPEILIGDLPSDIRGTSRIVRDGETLWEKPFLSGEANMSHTIANLEHHHFKYS AFRQPGDVHVHMFGTATLSFADGVKTEAGDVFEIEAGDFGLPLRNPLEIEKPVKVAVKAL >Mature_380_residues MRRSSLKEPGPASAIRTENFTRGMGEVPAALGKVCRGGSHAKAHERGLIMLISQILDDAETIRVVARNGGKTRIINGARS VYSLAMEAARTGVGLATLIERKGLGETVDLDAAYKKGRLLSPINHPDPAHLHLTGTGLTHLGSAATRDSMHKKLSSADGE EQLTDSMKMFRMGLEGGKPAKGQVGVQPEWFYKGNGTMAVAPGAALLSPAFAKDAGEEPEIAGIYVIGDDGAPFRVGFTL SNEFSDHVTERVNYLFLAHSKLRNASFGPEILIGDLPSDIRGTSRIVRDGETLWEKPFLSGEANMSHTIANLEHHHFKYS AFRQPGDVHVHMFGTATLSFADGVKTEAGDVFEIEAGDFGLPLRNPLEIEKPVKVAVKAL
Specific function: Unknown
COG id: COG3802
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40827; Mature: 40827
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSSLKEPGPASAIRTENFTRGMGEVPAALGKVCRGGSHAKAHERGLIMLISQILDDAE CCCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHCCHH TIRVVARNGGKTRIINGARSVYSLAMEAARTGVGLATLIERKGLGETVDLDAAYKKGRLL EEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEECHHHHHCCCEE SPINHPDPAHLHLTGTGLTHLGSAATRDSMHKKLSSADGEEQLTDSMKMFRMGLEGGKPA CCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC KGQVGVQPEWFYKGNGTMAVAPGAALLSPAFAKDAGEEPEIAGIYVIGDDGAPFRVGFTL CCCCCCCCCEEECCCCEEEECCCHHHHCCHHHHCCCCCCCEEEEEEECCCCCCEEEEEEE SNEFSDHVTERVNYLFLAHSKLRNASFGPEILIGDLPSDIRGTSRIVRDGETLWEKPFLS CCCHHHHHHHHHHEEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHCCCCC GEANMSHTIANLEHHHFKYSAFRQPGDVHVHMFGTATLSFADGVKTEAGDVFEIEAGDFG CCCCCHHHHHHHHHHHEEHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCC LPLRNPLEIEKPVKVAVKAL CCCCCCCCCCCCHHHHEECC >Mature Secondary Structure MRRSSLKEPGPASAIRTENFTRGMGEVPAALGKVCRGGSHAKAHERGLIMLISQILDDAE CCCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHCCHH TIRVVARNGGKTRIINGARSVYSLAMEAARTGVGLATLIERKGLGETVDLDAAYKKGRLL EEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEECHHHHHCCCEE SPINHPDPAHLHLTGTGLTHLGSAATRDSMHKKLSSADGEEQLTDSMKMFRMGLEGGKPA CCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC KGQVGVQPEWFYKGNGTMAVAPGAALLSPAFAKDAGEEPEIAGIYVIGDDGAPFRVGFTL CCCCCCCCCEEECCCCEEEECCCHHHHCCHHHHCCCCCCCEEEEEEECCCCCCEEEEEEE SNEFSDHVTERVNYLFLAHSKLRNASFGPEILIGDLPSDIRGTSRIVRDGETLWEKPFLS CCCHHHHHHHHHHEEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHCCCCC GEANMSHTIANLEHHHFKYSAFRQPGDVHVHMFGTATLSFADGVKTEAGDVFEIEAGDFG CCCCCHHHHHHHHHHHEEHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCC LPLRNPLEIEKPVKVAVKAL CCCCCCCCCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA