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The map label for this gene is yeiE [H]

Identifier: 13474676

GI number: 13474676

Start: 4507643

End: 4508545

Strand: Direct

Name: yeiE [H]

Synonym: mlr5616

Alternate gene names: 13474676

Gene position: 4507643-4508545 (Clockwise)

Preceding gene: 13474671

Following gene: 13474681

Centisome position: 64.06

GC content: 67.11

Gene sequence:

>903_bases
ATGACCCTGGATCAGTTGCGCATTTTCGTCGCCGTCGCCGAGCGCGGCCACATGACCAAGGCGGCGGAGCTTTTGGGTAT
CTCCCAGTCGGCGGCGTCGGCTGCCATCCGCGCGCTTGAAGAGCAGCACGGCGTTCATCTGTTCAACCGCGTCGGCCGCA
ACATCGAGCTCGCCCAGACCGGCCACCGGTTCCTGCCGGAGGCCAAGGCCGTGCTCGAGCGGGCCGCTGCCGCGCGCAAT
GTGCTGGAACATGTCTCGCAGACGGTCGCCGGCAGCCTCTCCATCGCCGCCAGCCTGACCATCGCCAGCTACTGGCTGCC
GCGAAGGCTGGCGTCCTTTCACGAGGCCTATCCCGCGGTGCGGCTGAGCGTCAGCATCGGCAACACAAGGCAGGTCGAGG
CCAGCGTGCTGGATGGAACCGCTGATCTCGGCCTGGTCGAGGGACGCACCGAATCCGACATATTGCGCCGCGCCAAGGTC
GACACCGACCGGTTGATGCTGGTGGTTGCCGCGTCACATCCCGATATCGTCGAAACCGCACCGGGCCGTCCCGACATCAA
GGGCCTGCGCTGGATCATCCGCGAAGGCGGTTCGGGCACGCGCGAGGTGTTGGAGGATCTGGCGCGGCGCGAGGGGATTT
CGCTTGCCGATCTGCAGGTGTTCCTGGTGCTGCCCAGCAATGAGGCGGTTCGCCAGGCGGTCGAGGCGGGCGCCGGCGCC
ACCATCATTTCAGAGCTCGTCGTCGGACGCGCCGTTGCCGAAGGCAGCCTGCGGTCCGTGCCGCTCGAACTGCCGAAACG
CGACTTCGCCATGATCACCCACCGCGACCGCCAGGCAAGCCTGGCCCAGATGGCGCTCAAGGCGCATCTCGGCGCCGAAA
CGAGCGGAAGCGGTTCAGTGTGA

Upstream 100 bases:

>100_bases
GAATTTTTTCTAACTTCGCGTGAAAATGTAGAATGAAGCTATCGATCCGTCTAATCAGTTGTTCTTGTAAATTCGATCGA
TATTGGTTCTTAATATCATC

Downstream 100 bases:

>100_bases
TCAGCCGAACTTGCGCTGGGCATCCAAAGCCAGGCCAAGCCCGACCGAGCCGAACATGTCGCCGTCGATGACGGAAGCCT
GCGGCACCAGCGACAGGATT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTLDQLRIFVAVAERGHMTKAAELLGISQSAASAAIRALEEQHGVHLFNRVGRNIELAQTGHRFLPEAKAVLERAAAARN
VLEHVSQTVAGSLSIAASLTIASYWLPRRLASFHEAYPAVRLSVSIGNTRQVEASVLDGTADLGLVEGRTESDILRRAKV
DTDRLMLVVAASHPDIVETAPGRPDIKGLRWIIREGGSGTREVLEDLARREGISLADLQVFLVLPSNEAVRQAVEAGAGA
TIISELVVGRAVAEGSLRSVPLELPKRDFAMITHRDRQASLAQMALKAHLGAETSGSGSV

Sequences:

>Translated_300_residues
MTLDQLRIFVAVAERGHMTKAAELLGISQSAASAAIRALEEQHGVHLFNRVGRNIELAQTGHRFLPEAKAVLERAAAARN
VLEHVSQTVAGSLSIAASLTIASYWLPRRLASFHEAYPAVRLSVSIGNTRQVEASVLDGTADLGLVEGRTESDILRRAKV
DTDRLMLVVAASHPDIVETAPGRPDIKGLRWIIREGGSGTREVLEDLARREGISLADLQVFLVLPSNEAVRQAVEAGAGA
TIISELVVGRAVAEGSLRSVPLELPKRDFAMITHRDRQASLAQMALKAHLGAETSGSGSV
>Mature_299_residues
TLDQLRIFVAVAERGHMTKAAELLGISQSAASAAIRALEEQHGVHLFNRVGRNIELAQTGHRFLPEAKAVLERAAAARNV
LEHVSQTVAGSLSIAASLTIASYWLPRRLASFHEAYPAVRLSVSIGNTRQVEASVLDGTADLGLVEGRTESDILRRAKVD
TDRLMLVVAASHPDIVETAPGRPDIKGLRWIIREGGSGTREVLEDLARREGISLADLQVFLVLPSNEAVRQAVEAGAGAT
IISELVVGRAVAEGSLRSVPLELPKRDFAMITHRDRQASLAQMALKAHLGAETSGSGSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=285, Percent_Identity=34.0350877192982, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI87082132, Length=273, Percent_Identity=27.1062271062271, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786401, Length=293, Percent_Identity=28.3276450511945, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI157672245, Length=209, Percent_Identity=30.622009569378, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790399, Length=248, Percent_Identity=25.8064516129032, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI145693105, Length=280, Percent_Identity=25.3571428571429, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1788748, Length=287, Percent_Identity=25.4355400696864, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787879, Length=174, Percent_Identity=34.4827586206897, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788296, Length=155, Percent_Identity=31.6129032258064, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1789173, Length=288, Percent_Identity=25.6944444444444, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787806, Length=173, Percent_Identity=29.4797687861272, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790208, Length=251, Percent_Identity=27.0916334661355, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787530, Length=147, Percent_Identity=32.6530612244898, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1788887, Length=178, Percent_Identity=32.0224719101124, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48994962, Length=110, Percent_Identity=38.1818181818182, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787601, Length=126, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787949, Length=289, Percent_Identity=26.643598615917, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788706, Length=126, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32102; Mature: 31971

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDQLRIFVAVAERGHMTKAAELLGISQSAASAAIRALEEQHGVHLFNRVGRNIELAQT
CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHC
GHRFLPEAKAVLERAAAARNVLEHVSQTVAGSLSIAASLTIASYWLPRRLASFHEAYPAV
CCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
RLSVSIGNTRQVEASVLDGTADLGLVEGRTESDILRRAKVDTDRLMLVVAASHPDIVETA
EEEEEECCCCEEEHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCC
PGRPDIKGLRWIIREGGSGTREVLEDLARREGISLADLQVFLVLPSNEAVRQAVEAGAGA
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHCCCCH
TIISELVVGRAVAEGSLRSVPLELPKRDFAMITHRDRQASLAQMALKAHLGAETSGSGSV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TLDQLRIFVAVAERGHMTKAAELLGISQSAASAAIRALEEQHGVHLFNRVGRNIELAQT
CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHC
GHRFLPEAKAVLERAAAARNVLEHVSQTVAGSLSIAASLTIASYWLPRRLASFHEAYPAV
CCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
RLSVSIGNTRQVEASVLDGTADLGLVEGRTESDILRRAKVDTDRLMLVVAASHPDIVETA
EEEEEECCCCEEEHHHHCCCCCCCEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCC
PGRPDIKGLRWIIREGGSGTREVLEDLARREGISLADLQVFLVLPSNEAVRQAVEAGAGA
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHCCCCH
TIISELVVGRAVAEGSLRSVPLELPKRDFAMITHRDRQASLAQMALKAHLGAETSGSGSV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]