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The map label for this gene is hofQ [C]

Identifier: 13474660

GI number: 13474660

Start: 4488609

End: 4490024

Strand: Direct

Name: hofQ [C]

Synonym: mlr5597

Alternate gene names: 13474660

Gene position: 4488609-4490024 (Clockwise)

Preceding gene: 13474659

Following gene: 13474661

Centisome position: 63.79

GC content: 60.73

Gene sequence:

>1416_bases
GTGACCGCCACCACAGCCACGCAGCGCGTCAAGCTTGGCCTCAACAAATCGGTGGTCATAGACCTGCCGAGCGATGCCTA
CGACATTCTCGTCGCCAACCCGACCGTTGCCGATGCGGTGACCCGCACCGCAAGGCGTATCTATCTGTTCGGCAAGTCGG
TCGGCGAGACCAATATTTTCGTCTTCGGTCCGAACGGCGAACAGATCGCCAGCCTGGACCTGGCCGTCGAACGCGACGTC
GCCGGCCTGGAGGACTATATCAGGCGTTTCCTTCCGACCTCGGACGTCAAGGTGGAACTGCTGAACGACAACGTCGTCTT
GACCGGAACGGTCGATACGCCGCTGGACGCGAAGCGGGCGGTCGACCTGGCGACGATCTTCGTCTCCGGCGGTGAAGCAA
CGACCGGGCAGTATTCGCAGACCGCGGCCGGCGGCTCGGCCCAGGGCGGCGTCGACATCAACAACCCCGACCAGGAACGA
CGCGTCTCGAAGATCGTCAACCTTCTGCAGATCATCGGCGACGACCAGGTCACGCTCAAGGTGACGGTCGCCGAAGTCAG
CCGCTCTGTGATGAAGCAGCTCGGCGTTAACATGGTCGGCAACGGTGGCAGCAACGGCATCAGCTATGGTGCACTCAGCG
ACAACTTCACGGGATTGGGTAAGCAGCTGTCGCATTCAGGTTTCAACATCGGCAACTCGGCACTGATGGCCTATATCAAC
GCCATGGAGCAGTCAGGGGTCATGAAGACACTGGCTGAGCCGACCTTGACCGCTGTATCCGGCGAGAAGGCAACGTTCAA
GGTCGGTGGCGAATACAACCTGCTAACCGGCGTCTCCCAGAACGTATCCAGCGATAACCAGACTGGCCTGACAACCTATA
CTATCAACAAGATCGAGTATGGCATCGGCCTGGAATTCCAGCCGGTGGTGCTGTCTCCCGGCCGCATCAGCCTGAAGGTC
AGAACCTCGGTTTCTGAGCCGACGACCGAAGGATCCGTGGCGCTTTCTAACGGCGTAACGAGCCCCGGCGCGAATATGCT
GTCGCTGCGCAAGCGCCTTGCCGATACGACGGTGGAACTGCCCTCTGGCGGTTCCATGATGATCGCCGGCCTGGTTCGCG
ACGATGTCAGGCAGGCCGTCAACGGCTTGCCGGGATTGACGAAGATTCCAGTGCTCGGCGCGCTCTTCCGCAGCAGGGAC
TTCGTGCGCAACGAAAGCGAGCTCGTCATCATCATCACGCCCTATCTGGCGAAGCCGGTGGCACGCAACGATCTCGCCAA
GCCGGACGACAATTTCAACCCCGCCAGCGACGGCGCCGCCAATTTCCTTGGCAAGGTCAATCGCGTCTACGGCACCATGC
AGACCGACAAGCCCAACGGCCGTTACCACGGCGTTGTCGGCTACATCTACAAGTGA

Upstream 100 bases:

>100_bases
GAGGCTAAGCGGTAAACTGCCGGCAATCGTGGCCGCGGCATTCGGCCTGCTGCTCGTCGGGACGAATGTGCAGGGCGTCG
TCGAGGCGAAGAGCACGCAC

Downstream 100 bases:

>100_bases
ATGGGGAAGCGGACATGTCTCAGTCAGCGTTGAACACAAGGACCATCGCCACGACGATGCGCGCCGGCCGTTCGCGGACC
GGGCTGCCGGTGTTGCCGGT

Product: exporter protein, cpaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTATTATQRVKLGLNKSVVIDLPSDAYDILVANPTVADAVTRTARRIYLFGKSVGETNIFVFGPNGEQIASLDLAVERDV
AGLEDYIRRFLPTSDVKVELLNDNVVLTGTVDTPLDAKRAVDLATIFVSGGEATTGQYSQTAAGGSAQGGVDINNPDQER
RVSKIVNLLQIIGDDQVTLKVTVAEVSRSVMKQLGVNMVGNGGSNGISYGALSDNFTGLGKQLSHSGFNIGNSALMAYIN
AMEQSGVMKTLAEPTLTAVSGEKATFKVGGEYNLLTGVSQNVSSDNQTGLTTYTINKIEYGIGLEFQPVVLSPGRISLKV
RTSVSEPTTEGSVALSNGVTSPGANMLSLRKRLADTTVELPSGGSMMIAGLVRDDVRQAVNGLPGLTKIPVLGALFRSRD
FVRNESELVIIITPYLAKPVARNDLAKPDDNFNPASDGAANFLGKVNRVYGTMQTDKPNGRYHGVVGYIYK

Sequences:

>Translated_471_residues
MTATTATQRVKLGLNKSVVIDLPSDAYDILVANPTVADAVTRTARRIYLFGKSVGETNIFVFGPNGEQIASLDLAVERDV
AGLEDYIRRFLPTSDVKVELLNDNVVLTGTVDTPLDAKRAVDLATIFVSGGEATTGQYSQTAAGGSAQGGVDINNPDQER
RVSKIVNLLQIIGDDQVTLKVTVAEVSRSVMKQLGVNMVGNGGSNGISYGALSDNFTGLGKQLSHSGFNIGNSALMAYIN
AMEQSGVMKTLAEPTLTAVSGEKATFKVGGEYNLLTGVSQNVSSDNQTGLTTYTINKIEYGIGLEFQPVVLSPGRISLKV
RTSVSEPTTEGSVALSNGVTSPGANMLSLRKRLADTTVELPSGGSMMIAGLVRDDVRQAVNGLPGLTKIPVLGALFRSRD
FVRNESELVIIITPYLAKPVARNDLAKPDDNFNPASDGAANFLGKVNRVYGTMQTDKPNGRYHGVVGYIYK
>Mature_470_residues
TATTATQRVKLGLNKSVVIDLPSDAYDILVANPTVADAVTRTARRIYLFGKSVGETNIFVFGPNGEQIASLDLAVERDVA
GLEDYIRRFLPTSDVKVELLNDNVVLTGTVDTPLDAKRAVDLATIFVSGGEATTGQYSQTAAGGSAQGGVDINNPDQERR
VSKIVNLLQIIGDDQVTLKVTVAEVSRSVMKQLGVNMVGNGGSNGISYGALSDNFTGLGKQLSHSGFNIGNSALMAYINA
MEQSGVMKTLAEPTLTAVSGEKATFKVGGEYNLLTGVSQNVSSDNQTGLTTYTINKIEYGIGLEFQPVVLSPGRISLKVR
TSVSEPTTEGSVALSNGVTSPGANMLSLRKRLADTTVELPSGGSMMIAGLVRDDVRQAVNGLPGLTKIPVLGALFRSRDF
VRNESELVIIITPYLAKPVARNDLAKPDDNFNPASDGAANFLGKVNRVYGTMQTDKPNGRYHGVVGYIYK

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=250, Percent_Identity=29.6, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 49932; Mature: 49801

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATTATQRVKLGLNKSVVIDLPSDAYDILVANPTVADAVTRTARRIYLFGKSVGETNIF
CCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCHHHHHHHHHEEEEEEECCCCCCEEE
VFGPNGEQIASLDLAVERDVAGLEDYIRRFLPTSDVKVELLNDNVVLTGTVDTPLDAKRA
EECCCCCEEEEEEEEEHHCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCHHHH
VDLATIFVSGGEATTGQYSQTAAGGSAQGGVDINNPDQERRVSKIVNLLQIIGDDQVTLK
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
VTVAEVSRSVMKQLGVNMVGNGGSNGISYGALSDNFTGLGKQLSHSGFNIGNSALMAYIN
EEHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
AMEQSGVMKTLAEPTLTAVSGEKATFKVGGEYNLLTGVSQNVSSDNQTGLTTYTINKIEY
HHHHCCHHHHHCCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEEE
GIGLEFQPVVLSPGRISLKVRTSVSEPTTEGSVALSNGVTSPGANMLSLRKRLADTTVEL
CCCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCEEEC
PSGGSMMIAGLVRDDVRQAVNGLPGLTKIPVLGALFRSRDFVRNESELVIIITPYLAKPV
CCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCH
ARNDLAKPDDNFNPASDGAANFLGKVNRVYGTMQTDKPNGRYHGVVGYIYK
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
TATTATQRVKLGLNKSVVIDLPSDAYDILVANPTVADAVTRTARRIYLFGKSVGETNIF
CCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCHHHHHHHHHEEEEEEECCCCCCEEE
VFGPNGEQIASLDLAVERDVAGLEDYIRRFLPTSDVKVELLNDNVVLTGTVDTPLDAKRA
EECCCCCEEEEEEEEEHHCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCHHHH
VDLATIFVSGGEATTGQYSQTAAGGSAQGGVDINNPDQERRVSKIVNLLQIIGDDQVTLK
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
VTVAEVSRSVMKQLGVNMVGNGGSNGISYGALSDNFTGLGKQLSHSGFNIGNSALMAYIN
EEHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
AMEQSGVMKTLAEPTLTAVSGEKATFKVGGEYNLLTGVSQNVSSDNQTGLTTYTINKIEY
HHHHCCHHHHHCCCCEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEEEE
GIGLEFQPVVLSPGRISLKVRTSVSEPTTEGSVALSNGVTSPGANMLSLRKRLADTTVEL
CCCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCEEEC
PSGGSMMIAGLVRDDVRQAVNGLPGLTKIPVLGALFRSRDFVRNESELVIIITPYLAKPV
CCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCH
ARNDLAKPDDNFNPASDGAANFLGKVNRVYGTMQTDKPNGRYHGVVGYIYK
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]