Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474642

Identifier: 13474642

GI number: 13474642

Start: 4471715

End: 4472275

Strand: Reverse

Name: 13474642

Synonym: mll5573

Alternate gene names: NA

Gene position: 4472275-4471715 (Counterclockwise)

Preceding gene: 13474644

Following gene: 13474639

Centisome position: 63.56

GC content: 68.09

Gene sequence:

>561_bases
GTGTCTGGTTTCGCGTCGCTTCGCCTGGCCCTCAGCGCAGCATTTCTCGGCGCTCTCCTCTATTCCCCGCTTGCCGCGGC
GCAGAGCGCGGCCGCGCCCGCCCAGAATGCCGTCACGCTCGGGCCGAGCGGCCTGCCGCTACCGCGATTCGTCAGCCTGA
AGTCCGGCCGCGTCAATTCGCGCGTCGGCCCCGGCGCCAACTACTCGGTCGACTGGATGTATCTGAAGGCCGGTCTGCCG
ATGGAGGTCGTCCAGGAATTCGACACATGGCGCCGCGTGCGCGACGCCGATGGCTCCGAGGGCTGGATCAACCAGTCGCT
GCTGTCGGGCCGGCGCACGGCGATCATCGCGCCGTGGCAGCGCGGCAAGGGCGCCCAAATCAATCTTATGAAAAGCCCCG
ACAAGGATGCCCGAGTGGTGGCGATCGTCGAGCCCGGCGTCATGGGCACGATCAAGTCCTGCGACGGCCAGTGGTGCGAA
ATGACGCTTGAAGGCCACACCGGCTGGCTCGCCCAGGCCGCGGTCTGGGGCGCCTATCCCGGCGAGCGGGTCAAGGACTG
A

Upstream 100 bases:

>100_bases
CCGGTCGCGGTAGCCGATTTACCCATGTAACAAGCGGTGCCGCCGAAGACAAAGAAAAAGGGGCGCCAAGGCCACCGGGC
CGGCGCCGAAAGGAACGAAA

Downstream 100 bases:

>100_bases
GGTCGTCCCGTTTGCGTCCGATACGGCCAAGGTGAGTGTCCTGAAAACCGGTTGACAGTTTCAGGCCGTAGCCCAGCGCA
CGGTCGATGGCGATGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSGFASLRLALSAAFLGALLYSPLAAAQSAAAPAQNAVTLGPSGLPLPRFVSLKSGRVNSRVGPGANYSVDWMYLKAGLP
MEVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGKGAQINLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCE
MTLEGHTGWLAQAAVWGAYPGERVKD

Sequences:

>Translated_186_residues
MSGFASLRLALSAAFLGALLYSPLAAAQSAAAPAQNAVTLGPSGLPLPRFVSLKSGRVNSRVGPGANYSVDWMYLKAGLP
MEVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGKGAQINLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCE
MTLEGHTGWLAQAAVWGAYPGERVKD
>Mature_185_residues
SGFASLRLALSAAFLGALLYSPLAAAQSAAAPAQNAVTLGPSGLPLPRFVSLKSGRVNSRVGPGANYSVDWMYLKAGLPM
EVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGKGAQINLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCEM
TLEGHTGWLAQAAVWGAYPGERVKD

Specific function: Unknown

COG id: COG3807

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19888; Mature: 19757

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFASLRLALSAAFLGALLYSPLAAAQSAAAPAQNAVTLGPSGLPLPRFVSLKSGRVNS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCCCCC
RVGPGANYSVDWMYLKAGLPMEVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQ
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCC
RGKGAQINLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCEMTLEGHTGWLAQAAVWGAYP
CCCCCEEEEEECCCCCCEEEEEECCCCCEEHCCCCCCEEEEEECCCCCHHHHHHHHCCCC
GERVKD
CCCCCC
>Mature Secondary Structure 
SGFASLRLALSAAFLGALLYSPLAAAQSAAAPAQNAVTLGPSGLPLPRFVSLKSGRVNS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCCCCC
RVGPGANYSVDWMYLKAGLPMEVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQ
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCC
RGKGAQINLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCEMTLEGHTGWLAQAAVWGAYP
CCCCCEEEEEECCCCCCEEEEEECCCCCEEHCCCCCCEEEEEECCCCCHHHHHHHHCCCC
GERVKD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA