Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474575

Identifier: 13474575

GI number: 13474575

Start: 4399888

End: 4400373

Strand: Direct

Name: 13474575

Synonym: mlr5487

Alternate gene names: NA

Gene position: 4399888-4400373 (Clockwise)

Preceding gene: 13474574

Following gene: 13474576

Centisome position: 62.53

GC content: 59.88

Gene sequence:

>486_bases
ATGCAGGATCATCGTGCGGTGGTGCTGCCACGGCTCGGTGTTGCTGCGAAAAAGTCCGATTTGCGTGCGCGACTGATATT
TGCGATCTGGTCGCATCAGGGCGGGATACCGGGAGGAGCATATCGGATGCGCTGGAACATGATGATCTTGGCATCTTGCC
TGGCAACAGCCGGTTGCGTCGGCAATTCGATGTCCGAGCGGCAGGACGCCAACATAGAATCCTCCCTGCAATACGACACC
GTGCCGTGCGATCAGTTGCTGGCGCAGCGCAATGGCTTGGCGCAGCAATACAACCTACCGGTGACCGTGAAGCCGACCTT
CTCCAATCCTGCGATGGGTTTCGGTCCGTTCACGCCCGACATGCGCTCCAAGGCCAAGCGCGACAGCGACAAGGCGTCAG
GCGAGATCGATGCCATGAACCGGTCGCTCGAGCGTCGCGACTGCGGCAAGCCGGACAAGCAGAAGAAGTTCGCTCTGCCT
AGCTGA

Upstream 100 bases:

>100_bases
TGCGATCCTGGCGCTGGAGCCAACCACCATCCGGCAGGATCGCCGCGAGCCCGTCAAAGGGCTGGGCGTTGTGGCGTGGA
AGCCTCACGCCGCTTGAACT

Downstream 100 bases:

>100_bases
AGATAGAAGCGGCGGCTATCCGACGAGAGCGATAGCCGGCAGCATGCTCGCGTCCGCATGAGGGACGATCGATGAAACTC
TCGGACCTTGGCGACCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQDHRAVVLPRLGVAAKKSDLRARLIFAIWSHQGGIPGGAYRMRWNMMILASCLATAGCVGNSMSERQDANIESSLQYDT
VPCDQLLAQRNGLAQQYNLPVTVKPTFSNPAMGFGPFTPDMRSKAKRDSDKASGEIDAMNRSLERRDCGKPDKQKKFALP
S

Sequences:

>Translated_161_residues
MQDHRAVVLPRLGVAAKKSDLRARLIFAIWSHQGGIPGGAYRMRWNMMILASCLATAGCVGNSMSERQDANIESSLQYDT
VPCDQLLAQRNGLAQQYNLPVTVKPTFSNPAMGFGPFTPDMRSKAKRDSDKASGEIDAMNRSLERRDCGKPDKQKKFALP
S
>Mature_161_residues
MQDHRAVVLPRLGVAAKKSDLRARLIFAIWSHQGGIPGGAYRMRWNMMILASCLATAGCVGNSMSERQDANIESSLQYDT
VPCDQLLAQRNGLAQQYNLPVTVKPTFSNPAMGFGPFTPDMRSKAKRDSDKASGEIDAMNRSLERRDCGKPDKQKKFALP
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17745; Mature: 17745

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDHRAVVLPRLGVAAKKSDLRARLIFAIWSHQGGIPGGAYRMRWNMMILASCLATAGCV
CCCCCEEEECCCCCHHCHHHHHHHHHEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHC
GNSMSERQDANIESSLQYDTVPCDQLLAQRNGLAQQYNLPVTVKPTFSNPAMGFGPFTPD
CCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCCHH
MRSKAKRDSDKASGEIDAMNRSLERRDCGKPDKQKKFALPS
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDHRAVVLPRLGVAAKKSDLRARLIFAIWSHQGGIPGGAYRMRWNMMILASCLATAGCV
CCCCCEEEECCCCCHHCHHHHHHHHHEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHC
GNSMSERQDANIESSLQYDTVPCDQLLAQRNGLAQQYNLPVTVKPTFSNPAMGFGPFTPD
CCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCCHH
MRSKAKRDSDKASGEIDAMNRSLERRDCGKPDKQKKFALPS
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA