| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474571
Identifier: 13474571
GI number: 13474571
Start: 4395181
End: 4396197
Strand: Direct
Name: 13474571
Synonym: mlr5480
Alternate gene names: NA
Gene position: 4395181-4396197 (Clockwise)
Preceding gene: 13474570
Following gene: 13474574
Centisome position: 62.47
GC content: 67.55
Gene sequence:
>1017_bases GTGACCGTGGAAGTCGCCATCAAGCGCCGCAAGGCGATCCAGGCGACGATCACCGAAATCGAATCCGAGTTCCTGCCGGC CGTGCCTGATGTCGGCCTGGAGGTCGATGCCCCGGCGGCCGAGCCCGCGGCCACTGCGGCGCCCGCCATCGAGATCGGCG ACAAGGCGCCATCGCCCACCGTCACCGTCGACAGCCCCGCGCAGCCGGCATCCGATGCGCCGCGATCGCGCGTGCTGCCG GTCGTTCCCGACATCATGCCGGACGAGACGCTTCCTGGCGTGCCGGCCATCGACATGTCCGCTCCCGCAGCGTCCGGTGC TGCCACGGAAGTGGCGCCCGATCGCGATGAGCGGCGCATACGCGGGCGCCGTCTGCCGCTGACCGCCATTTTCTTCACCG TGACCCTGCTTGCGGCGATCGGCATCGGCGTGTTCTTCGCCATCCAGACCGGCGTGTTCAAGACTGCAGCGCAGCTTAAT ACGGCGCCGCCCGAGGCGCCGCCAACCGTCGAGGACGACGATTTCACCCCGGCCGACGGCGCCAACGCGCCGGCCAAGCC TGGCGCTGCGGACCAGTCGCGCAACTGGATCAATGTGTTCTCGCCGGCAGACCCGACGCATGTCGCCGCTCCGTCGGACG CCAAGGCCTCGGTGATGAAGGACGACACCGGTCCGTTCCTGCGCATCCAGTCCGGACCCTCCGGTTCGGCGATCGCCTTC GATGTCGGGCAGGGCGTGCTGGAGAAGCTCGCCGGCAAGCACGCCGTGTTCGACATCATCGCGCGTGCCGAGGACGGCAA GGACACGCAGATCTCCGTCGACTGCAATTTCGGCGAGCTTGGCGATTGCGGCCGCAAGCGCTACGCGGTCGGCCAGCAGC GCAACGAATATCTGTTCGACGTGCAGTTCCCCAACAAGCACCCGGGCTCGGCCGGAACCATCGCCGTCAATTCCGATTTC GACAAGCAGGGCAAGGCGGTCGACATCTACGAGATCCGCGTCTCGATCGAGCCGTAG
Upstream 100 bases:
>100_bases CGCCTTGGAAAAGGGCAACGCCGAAGACCGCGCGTTCCGCGAGAAGGTCTATCGGTCGGCCTTTGCCGCGCTCGACCGTG CGCTCCAGGCCAATCCCGGC
Downstream 100 bases:
>100_bases GACTCTAGCGGTCGAGCAGCGCTTGCAGCGTCTCGATGCGGTCGGCTTCGTTGGCCGGCTTGTCCCAGCGCAGCCGTGAA ATGCGGGGAAAGCGCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; BirS-Like Protein Incolved In Biotin Regulatory Network
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTVEVAIKRRKAIQATITEIESEFLPAVPDVGLEVDAPAAEPAATAAPAIEIGDKAPSPTVTVDSPAQPASDAPRSRVLP VVPDIMPDETLPGVPAIDMSAPAASGAATEVAPDRDERRIRGRRLPLTAIFFTVTLLAAIGIGVFFAIQTGVFKTAAQLN TAPPEAPPTVEDDDFTPADGANAPAKPGAADQSRNWINVFSPADPTHVAAPSDAKASVMKDDTGPFLRIQSGPSGSAIAF DVGQGVLEKLAGKHAVFDIIARAEDGKDTQISVDCNFGELGDCGRKRYAVGQQRNEYLFDVQFPNKHPGSAGTIAVNSDF DKQGKAVDIYEIRVSIEP
Sequences:
>Translated_338_residues MTVEVAIKRRKAIQATITEIESEFLPAVPDVGLEVDAPAAEPAATAAPAIEIGDKAPSPTVTVDSPAQPASDAPRSRVLP VVPDIMPDETLPGVPAIDMSAPAASGAATEVAPDRDERRIRGRRLPLTAIFFTVTLLAAIGIGVFFAIQTGVFKTAAQLN TAPPEAPPTVEDDDFTPADGANAPAKPGAADQSRNWINVFSPADPTHVAAPSDAKASVMKDDTGPFLRIQSGPSGSAIAF DVGQGVLEKLAGKHAVFDIIARAEDGKDTQISVDCNFGELGDCGRKRYAVGQQRNEYLFDVQFPNKHPGSAGTIAVNSDF DKQGKAVDIYEIRVSIEP >Mature_337_residues TVEVAIKRRKAIQATITEIESEFLPAVPDVGLEVDAPAAEPAATAAPAIEIGDKAPSPTVTVDSPAQPASDAPRSRVLPV VPDIMPDETLPGVPAIDMSAPAASGAATEVAPDRDERRIRGRRLPLTAIFFTVTLLAAIGIGVFFAIQTGVFKTAAQLNT APPEAPPTVEDDDFTPADGANAPAKPGAADQSRNWINVFSPADPTHVAAPSDAKASVMKDDTGPFLRIQSGPSGSAIAFD VGQGVLEKLAGKHAVFDIIARAEDGKDTQISVDCNFGELGDCGRKRYAVGQQRNEYLFDVQFPNKHPGSAGTIAVNSDFD KQGKAVDIYEIRVSIEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35428; Mature: 35297
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEVAIKRRKAIQATITEIESEFLPAVPDVGLEVDAPAAEPAATAAPAIEIGDKAPSPT CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHCCCEEECCCCCCCCE VTVDSPAQPASDAPRSRVLPVVPDIMPDETLPGVPAIDMSAPAASGAATEVAPDRDERRI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHH RGRRLPLTAIFFTVTLLAAIGIGVFFAIQTGVFKTAAQLNTAPPEAPPTVEDDDFTPADG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC ANAPAKPGAADQSRNWINVFSPADPTHVAAPSDAKASVMKDDTGPFLRIQSGPSGSAIAF CCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCHHHEECCCCCEEEEECCCCCCEEEE DVGQGVLEKLAGKHAVFDIIARAEDGKDTQISVDCNFGELGDCGRKRYAVGQQRNEYLFD EHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCEEEE VQFPNKHPGSAGTIAVNSDFDKQGKAVDIYEIRVSIEP EECCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECC >Mature Secondary Structure TVEVAIKRRKAIQATITEIESEFLPAVPDVGLEVDAPAAEPAATAAPAIEIGDKAPSPT EEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHCCCEEECCCCCCCCE VTVDSPAQPASDAPRSRVLPVVPDIMPDETLPGVPAIDMSAPAASGAATEVAPDRDERRI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHH RGRRLPLTAIFFTVTLLAAIGIGVFFAIQTGVFKTAAQLNTAPPEAPPTVEDDDFTPADG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC ANAPAKPGAADQSRNWINVFSPADPTHVAAPSDAKASVMKDDTGPFLRIQSGPSGSAIAF CCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCHHHEECCCCCEEEEECCCCCCEEEE DVGQGVLEKLAGKHAVFDIIARAEDGKDTQISVDCNFGELGDCGRKRYAVGQQRNEYLFD EHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCEEEE VQFPNKHPGSAGTIAVNSDFDKQGKAVDIYEIRVSIEP EECCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA