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The map label for this gene is 13474568

Identifier: 13474568

GI number: 13474568

Start: 4389099

End: 4389698

Strand: Direct

Name: 13474568

Synonym: mlr5477

Alternate gene names: NA

Gene position: 4389099-4389698 (Clockwise)

Preceding gene: 13474566

Following gene: 13474569

Centisome position: 62.38

GC content: 60.17

Gene sequence:

>600_bases
ATGGCACTTACGCATAAGCAGCGGCGATTCGTTCAGGAATATCTAAGGTCGGAGACGGGCACAGAGGCGGCATTGCGTGC
TGGCTACGCGGCGCTGTCTGCTCCCGTCACCGCATCTCGCCTGATGAACGATCCCGAGATATTGGCCGCGATTGAGGAAG
GGCAACAAAAGCGGCTCGATCGCGTCGAGGTCGACGCGAACTACTTGCTTAAGCGGCTGCACGAAGAAGTCGAAGCCGAC
CTAGCTGACCTCTACGACGAGGAAACGGGCGATCTTCTTCCCGTCCACCAATGGCCCGAGGTCTGGCGACGTGGGCTTGT
AGCCGGGGTTGAGATTGAAGCCGTGTTCGAGGGGCGCGGTGAAGATCGCGTCCAGATAGGTACTACGAAAAAGCTTAAGC
TGTCCGACCGCGCTCGCCGGATCGAAGCGCTTGGTCGTCACGTGTCGGTCGCCGCGTTCCGCGATACCCTGCAGATCAAG
AGTCTGGATGGCCTTGCCGACCGACTTGCGCGCGTTTCACGCGCTCAAACCGCCCCAGACGTCGTGAACGCTGAGCCTGC
TCCGGCGCTGAGGTCCGATGCGCACCATTCAACAAAATAG

Upstream 100 bases:

>100_bases
GATTCCATCGCGCAAGGGTCCGTTTCAGTTCAACAGGCAAAATCATAATTTCTGATAAGGCGGAAACTCGCAACAACCGT
GCCACAATAGAGTTCCGTTC

Downstream 100 bases:

>100_bases
TGCGACGCATCACCACGCGTGATGCCAGCTTCACGACCAAAATCCCGATTGGAAAGAGCTGGCATCGCCGCCCGCCCATT
CAAGCCTGGGAGCCCGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Terminase Small Subunit Superfamily

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MALTHKQRRFVQEYLRSETGTEAALRAGYAALSAPVTASRLMNDPEILAAIEEGQQKRLDRVEVDANYLLKRLHEEVEAD
LADLYDEETGDLLPVHQWPEVWRRGLVAGVEIEAVFEGRGEDRVQIGTTKKLKLSDRARRIEALGRHVSVAAFRDTLQIK
SLDGLADRLARVSRAQTAPDVVNAEPAPALRSDAHHSTK

Sequences:

>Translated_199_residues
MALTHKQRRFVQEYLRSETGTEAALRAGYAALSAPVTASRLMNDPEILAAIEEGQQKRLDRVEVDANYLLKRLHEEVEAD
LADLYDEETGDLLPVHQWPEVWRRGLVAGVEIEAVFEGRGEDRVQIGTTKKLKLSDRARRIEALGRHVSVAAFRDTLQIK
SLDGLADRLARVSRAQTAPDVVNAEPAPALRSDAHHSTK
>Mature_198_residues
ALTHKQRRFVQEYLRSETGTEAALRAGYAALSAPVTASRLMNDPEILAAIEEGQQKRLDRVEVDANYLLKRLHEEVEADL
ADLYDEETGDLLPVHQWPEVWRRGLVAGVEIEAVFEGRGEDRVQIGTTKKLKLSDRARRIEALGRHVSVAAFRDTLQIKS
LDGLADRLARVSRAQTAPDVVNAEPAPALRSDAHHSTK

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22196; Mature: 22065

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTHKQRRFVQEYLRSETGTEAALRAGYAALSAPVTASRLMNDPEILAAIEEGQQKRLD
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHH
RVEVDANYLLKRLHEEVEADLADLYDEETGDLLPVHQWPEVWRRGLVAGVEIEAVFEGRG
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
EDRVQIGTTKKLKLSDRARRIEALGRHVSVAAFRDTLQIKSLDGLADRLARVSRAQTAPD
CCEEEECCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVNAEPAPALRSDAHHSTK
CCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
ALTHKQRRFVQEYLRSETGTEAALRAGYAALSAPVTASRLMNDPEILAAIEEGQQKRLD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHH
RVEVDANYLLKRLHEEVEADLADLYDEETGDLLPVHQWPEVWRRGLVAGVEIEAVFEGRG
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
EDRVQIGTTKKLKLSDRARRIEALGRHVSVAAFRDTLQIKSLDGLADRLARVSRAQTAPD
CCEEEECCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VVNAEPAPALRSDAHHSTK
CCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA